Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 1,395,683 | +C | 6.0% | intergenic (+495/‑436) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 1,395,683 | 1 | .→C | 6.0% | 59.8 ‑0.2 ‑0.0 | 366 | intergenic (+495/‑436) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (13/9): ref base (187/157): total (200/166) | ||||||||||
Fisher's exact test strand distribution p-value = 8.26e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.65e-01 |
Only 100 of 422 total aligned reads displayed.
GCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGC > NC_014034/1395585‑1395783
|
gCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..Gc < 1:6128623/101‑1 (MQ=255)
gCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..Gc < 2:4445359/101‑1 (MQ=255)
gTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAg > 1:116810/1‑101 (MQ=255)
gTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAg > 1:5892832/1‑101 (MQ=255)
gTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAg > 1:2766952/1‑101 (MQ=255)
ggATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGtt > 2:2118791/1‑101 (MQ=255)
aTCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCg < 2:2617516/101‑1 (MQ=255)
tCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGCAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTTCATGTAGTCGGCG.G..GCAGTTCGa > 2:832486/1‑101 (MQ=255)
tCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGa > 2:1536366/1‑101 (MQ=255)
gAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.Gc > 2:1132333/1‑101 (MQ=255)
gAAACCACCTTGCGGATTGTCACTTTCGAGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.Gc > 1:5069399/1‑101 (MQ=255)
aaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCg > 1:1866102/1‑101 (MQ=255)
aaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCg < 2:4743179/101‑1 (MQ=255)
aaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCg > 2:4010374/1‑101 (MQ=255)
tcagtcatGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGc > 2:3267065/8‑101 (MQ=255)
ccaccTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCa < 1:134279/101‑1 (MQ=255)
caccTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAg > 2:3810991/1‑101 (MQ=255)
ccTTGCGGATTGTCACTGGCGCGGGGCAAATCGTCGCACCCCACGCGGGGACGAGAATCGAAACATCTGAATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTc < 2:1269876/101‑1 (MQ=255)
cTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCg < 1:6530957/101‑1 (MQ=255)
cTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCg > 2:4660863/1‑101 (MQ=255)
tGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCt < 2:1808573/101‑1 (MQ=255)
gCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTc > 2:5014717/1‑101 (MQ=255)
gCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTc < 2:6331316/101‑1 (MQ=255)
ggATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTccc < 1:43831/101‑1 (MQ=255)
gATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTcccc < 1:5267469/101‑1 (MQ=255)
ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTcccccc < 2:3452774/101‑1 (MQ=255)
ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTcccccc > 2:6807326/1‑101 (MQ=255)
tGTCACTTTCGCGGGGCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCcg < 2:5631423/101‑1 (MQ=255)
gTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCcgc < 2:6088594/101‑1 (MQ=255)
gTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCcgc > 2:6723088/1‑101 (MQ=255)
cTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCgggg > 2:1408783/1‑101 (MQ=255)
ttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGc < 1:2177481/101‑1 (MQ=255)
cgcgGGGCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGt < 1:6265978/101‑1 (MQ=255)
ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GC.GAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTg > 2:1700774/10‑101 (MQ=2)
cgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTgg < 1:4270277/101‑1 (MQ=255)
ggggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGa < 1:2594620/101‑1 (MQ=255)
gggccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GC.GAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTgg < 1:1446459/93‑1 (MQ=2)
gggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:2771258/101‑1 (MQ=255)
gggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:4010549/101‑1 (MQ=255)
tcactcgagccGCTCCCCCCGGGGGGGCGTGGTGCAAAACATCGGCTTGTCCGCTTCGAA..CCTGGTCGC.GTCGCCGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:2322139/91‑1 (MQ=2)
ggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:3071928/101‑1 (MQ=255)
ggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2457405/101‑1 (MQ=255)
ggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGGAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2216234/101‑1 (MQ=255)
gccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GC.GAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGAt < 2:4224277/95‑1 (MQ=2)
gccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GC.GAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGAt > 1:4318858/7‑101 (MQ=2)
cGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGa > 1:1221912/1‑101 (MQ=255)
gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:1940605/1‑101 (MQ=255)
gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:105771/1‑101 (MQ=255)
aaGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:5418038/1‑101 (MQ=255)
tgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GC.GAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:3942573/2‑101 (MQ=2)
tgCGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACACCCCGAACCTGTCGGCG.GC.GAACACCGATACCGC.GTCGCTCCCGCCGCGGGGGCGTGGATCGagc > 2:5848258/2‑99 (MQ=2)
aGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 1:5394979/1‑101 (MQ=255)
gCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GC.GAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 1:5658248/101‑1 (MQ=2)
cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCGGCAGTG.GCAGGTTTTCCA.GCGGC.GTCGCTCCCCCCGCGGGGGCGTGGAGCGAAAcc > 2:6877772/1‑100 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCATTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGt < 1:4585699/101‑1 (MQ=255)
ccTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTAt < 2:1867012/100‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCTTGTCCGCATCGAA..GCTGGTCAC.ATCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcggcgta < 1:4558574/101‑7 (MQ=2)
tCCCCCCGGGGGGGCGTGGATCGAAACATCTGCATGTAGCCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATgg < 1:832510/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGa > 1:98547/1‑101 (MQ=255)
cccccGCGGGGGCGGGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGAt < 2:523025/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTg < 1:6005930/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTg > 2:1213817/1‑101 (MQ=255)
cgcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTgg < 2:4579664/101‑1 (MQ=255)
ggggggCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgcg < 1:4895420/100‑1 (MQ=255)
gggggCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgcgc > 2:4899301/1‑101 (MQ=255)
ggggCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCa > 1:1659862/1‑101 (MQ=255)
gCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAAc < 2:2900898/101‑1 (MQ=255)
gCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAAc < 1:3238987/101‑1 (MQ=255)
tgtagATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGCATCTGGCGCAAACg > 1:6837709/5‑101 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa < 2:2487973/101‑1 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa > 2:4091292/1‑101 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa < 2:6506740/101‑1 (MQ=255)
acaaaacgctCTGCCTGTCGTGGCGG.G..GAAGTGGGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAg < 2:1640120/92‑1 (MQ=21)
tCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGt < 2:2811739/101‑1 (MQ=255)
tCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGt > 1:668273/1‑101 (MQ=255)
tCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGt > 2:6261544/1‑101 (MQ=255)
cGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTc > 2:6994369/1‑101 (MQ=255)
aaaCATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTg < 1:356010/101‑1 (MQ=255)
aaaCATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTg > 1:2963383/1‑101 (MQ=255)
accttCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgt < 1:4079946/97‑1 (MQ=255)
aaCATCTGCATGTAGGCGGGG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgt < 1:1107614/101‑1 (MQ=255)
aCATCTGCATGTAGTCGGCG.G..GCAGTGCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtc < 1:5130700/101‑1 (MQ=255)
cATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcg > 1:6370234/1‑101 (MQ=255)
aTCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTNTGGATCTGGCGCAAACGGAAAGTCTgtcgt > 1:1984913/1‑101 (MQ=255)
aTCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgt > 1:6627045/1‑101 (MQ=255)
tCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgtc < 1:2349569/101‑1 (MQ=255)
tCTGCATGGAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgtc < 1:1838428/101‑1 (MQ=255)
cTGCAGGTAGGCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGtcgtcg < 2:3415184/101‑1 (MQ=255)
tGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGc > 2:5899082/1‑101 (MQ=255)
aTGTGGGCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcc < 1:670441/101‑1 (MQ=255)
aTGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcc < 1:7010128/101‑1 (MQ=255)
tGTAGTCGGGG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAACGTCTGTCGTCGCTccc > 2:5085261/1‑101 (MQ=255)
agccgggg.g..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcccccc < 2:6594548/98‑1 (MQ=255)
aGTCGGCT.G..GAAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcccccc < 1:4659912/101‑1 (MQ=255)
gTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCcg > 1:387934/1‑101 (MQ=255)
cg.g..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCgggg < 1:3424807/101‑1 (MQ=255)
cg.g..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCgggg > 2:3157127/1‑101 (MQ=255)
g.g..gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCggggg > 2:3620416/1‑101 (MQ=255)
g..gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGc < 1:6783428/101‑1 (MQ=255)
g..gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGc < 1:1536426/101‑1 (MQ=255)
|
GCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGC > NC_014034/1395585‑1395783
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|