| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,732,696 | +C | 91.9% | intergenic (‑120/‑283) | RCAP_rcc01601 ← / → tgt | FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,732,696 | 1 | .→C | 91.9% | 24.6 ‑3.9 ‑1.9 | 123 | intergenic (‑120/‑283) | RCAP_rcc01601/tgt | FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase |
| Reads supporting (aligned to +/- strand): new base (18/95): ref base (5/5): total (23/100) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.98e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.21e-02 | ||||||||||
Only 100 of 158 total aligned reads displayed.
TAGAGTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..CC..GG.GC..GGG..CGG..G...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTCC > NC_014034/1732597‑1732784
|
tAGAGTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..c > 2:863953/1‑101 (MQ=255)
agagTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGGCGCGGC.G.A..cc > 2:1427672/1‑101 (MQ=255)
agagTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..cc > 2:786624/1‑101 (MQ=255)
agagTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..cc < 2:2394280/101‑1 (MQ=255)
agagTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..cc > 1:4977044/1‑101 (MQ=255)
gagTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.C..ccc > 1:6638051/1‑100 (MQ=255)
gagTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..ccc < 2:3028388/101‑2 (MQ=255)
gagTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..ccc > 1:4037539/1‑100 (MQ=255)
agTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..cccg > 2:2188361/1‑99 (MQ=255)
agTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..cccg < 2:1716404/101‑3 (MQ=255)
tttATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..Cc..cg.gg > 2:3915445/1‑100 (MQ=255)
ttATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCGGCGGC.G.A..Cc..cg.ggg > 1:4645419/1‑99 (MQ=255)
ttATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..Cc..cg.ggc < 1:3342181/101‑3 (MQ=255)
ttATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..Cc..cg.ggc > 1:3981787/1‑99 (MQ=255)
tatgtaGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGGTTCGCCGCGGCCGGGCCGCGGC.G.A..ccccggcg > 1:6840622/1‑95 (MQ=255)
tatataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..g > 1:1577619/1‑101 (MQ=255)
tatataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..g > 2:6237839/1‑101 (MQ=255)
atataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCTGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gg > 1:6000359/1‑101 (MQ=255)
atataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gg > 2:1532159/1‑101 (MQ=255)
atataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gg < 1:1618774/101‑1 (MQ=255)
atataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..Cc..cg.gg..ggg > 1:2462177/1‑101 (MQ=255)
atataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGAAGGGTTTCGCCGCGGCGGGGCGGCGGG.G.A..Cc..cg.gg..ggg > 1:2277572/1‑101 (MQ=255)
ataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggg > 2:3933041/1‑100 (MQ=255)
ataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggg > 2:5511221/1‑100 (MQ=255)
taGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..ggggg < 2:253174/101‑3 (MQ=255)
aGGGTATGGGGGGGAGAGGTAAAGGCGGTCGGTGCGGGGGGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggggc < 2:1052322/101‑4 (MQ=255)
aGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggggc < 2:6084043/101‑4 (MQ=255)
aGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..ggg..ggg > 1:191976/1‑101 (MQ=255)
gggTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggggct < 2:5532921/101‑5 (MQ=255)
gggTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggggct < 2:5952168/101‑5 (MQ=255)
ggTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggggctc < 1:5591348/101‑6 (MQ=255)
ggTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggggctc < 2:3759192/101‑6 (MQ=255)
gTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCTGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggggctcc < 2:6000054/101‑7 (MQ=255)
gTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggggctcc < 2:1407920/101‑7 (MQ=255)
gTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..CC..CG.GG..GGG..Ggg..g...ggc > 2:2824573/1‑99 (MQ=255)
gTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGAGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggggctcc < 2:4063004/101‑7 (MQ=255)
tATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggggctccg < 2:4721922/101‑8 (MQ=39)
tATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGACGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GC..GGG..GGG..G...Gcg > 2:1013727/1‑100 (MQ=255)
tATCGGGGGGAGAGGTAAAGGCCGGCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCACGGTTTCGCCGCGGCGGGGCCGCAGC.G.C..CC..CG.CG..CGG..CGG..G...Gccg > 2:4010455/1‑100 (MQ=255)
aTCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggggctccgc < 2:2695812/101‑9 (MQ=38)
aTCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..CC..CG.GG..GGG..GGG..G...Gccgc > 1:6424062/1‑99 (MQ=255)
tCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggggctccgcc < 1:1145715/101‑10 (MQ=38)
cGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.Cc..gg.gc..gggggctccgccc < 2:6487519/101‑11 (MQ=38)
cGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..CC..CG.GG..GGG..GGG..G...Gccgccc > 2:6700189/1‑100 (MQ=255)
gggggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GC..GGG..GGG..G...Gcgccccc > 2:4465567/1‑99 (MQ=255)
ggggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.ACCCc..gg.gc..ggg..ggg..gcggccccc > 2:1460091/1‑93 (MQ=255)
gagaGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GC..GGG...GG..G...GCCGCCCCCcccc > 1:1261984/1‑101 (MQ=255)
agagGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GC..GGG...GG..G...GCCCGCCCCccccc > 2:637309/1‑101 (MQ=255)
ggTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCAccccc < 2:5363609/101‑1 (MQ=25)
ggTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCAccccc < 1:1877549/101‑1 (MQ=25)
ggTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCAccccc < 1:2961222/101‑1 (MQ=25)
gTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCg < 1:5485686/101‑1 (MQ=25)
aaaGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GC..GGG..GGC..G...GCCGCCCCCccccccccgc > 2:1716318/1‑96 (MQ=255)
aaaGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..CCCGGG.GC..GGG..GGG..GC..GCCCCCCCCcccccccc > 2:6132646/1‑98 (MQ=255)
aGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGt < 1:3227348/101‑1 (MQ=25)
gCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTAt < 2:3526686/101‑1 (MQ=25)
ccGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTAtt < 1:393330/101‑1 (MQ=25)
ggTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTgcgc < 1:818411/101‑1 (MQ=21)
gTGCGGGGCGGAAAGCCGCGTGCCAAGGAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGcc < 2:4233433/101‑1 (MQ=21)
gTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGcc < 2:1978579/101‑1 (MQ=21)
gggggCGGAAAGCCGAGTGCCCAGCAGGGTTTCTCCGCGGCGTGGCCGCGGC.GCC..CC..GG.GC..GGGGCCTC..C...GCTCCGGCACCCCCGGCGTATTTGCGCCaag < 2:3029426/100‑1 (MQ=255)
ggAAAGCCGCGTGCCAAGCAGGGGTTCGCCGCGGCGGGGCCGCGGC.GCC..CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGaaa < 1:5308600/101‑1 (MQ=18)
gAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGACGAAAc < 1:5635746/101‑1 (MQ=18)
aaGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GC..GGG..GGG..GCCCGCCCCCCCCCCCCCCGCGCTTTTGGCCCAAGAAGaaaaa > 2:6763712/1‑99 (MQ=255)
aGCCGCGTGCGAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAg < 2:780283/101‑1 (MQ=18)
aGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GC..GGG..GGG..GCC.GCCCCCCCCCCCCCCGCGCATTTTGGGCCAGAAGGAAC.aaa > 2:4999290/1‑100 (MQ=255)
cgcgTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCgg < 2:6597525/101‑1 (MQ=18)
cgcgTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCgg < 1:3567709/101‑1 (MQ=18)
gcgTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCggg < 2:244602/101‑1 (MQ=18)
cgTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGa < 2:2826463/101‑1 (MQ=18)
gTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGAc < 2:1826402/101‑1 (MQ=18)
tGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGAcc < 2:6977936/101‑1 (MQ=18)
tGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGAcc < 1:1716382/101‑1 (MQ=18)
ccAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAg < 2:3836160/101‑1 (MQ=18)
aGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGcc < 1:6493003/101‑1 (MQ=18)
aGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGccccc < 1:4887241/101‑1 (MQ=18)
aGGGTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGccccc < 1:6132958/101‑1 (MQ=18)
gggTTTCGCCGCGGGGGGGCCGCGGCGG.C..CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGcccccc < 1:3196958/101‑1 (MQ=18)
gggTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGcccccc < 2:1742346/101‑1 (MQ=18)
gggTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGcccccc < 2:5195435/101‑1 (MQ=18)
gggTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGcccccc < 1:1230755/101‑1 (MQ=18)
gggTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGcccccc < 1:4542202/101‑1 (MQ=18)
gggTTTCGCCGCGGCGGGGCCGCGGC.G.A..CCCGGGCGC..GGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGcccccc < 2:1577558/101‑1 (MQ=18)
ggTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCAGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCt < 1:374638/101‑1 (MQ=21)
gTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTg < 1:534902/101‑1 (MQ=18)
gTTTCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTg < 2:2469620/101‑1 (MQ=18)
tttCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGCAGAAAC.AAGCGGGACTAGGCCCCCCTGc < 1:6279734/101‑1 (MQ=18)
ttCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CCC..C...GCCCCCCCACCCCCCGCGGATTTTTGCCCACAAGAAACAAAAGGGGGCCAGGccccccccc > 2:5771149/1‑98 (MQ=9)
tCGCCGCGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTGCAg < 1:4631786/101‑1 (MQ=18)
cgccgcGGCGGGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTGCAGc < 2:5125247/101‑1 (MQ=18)
ccgcGGCGGGGCCGCGGC.G.AC.CC..GG.GC..GGG..GGGTCC...CCCCCCCCCCCCCCCGCGGATTTTCCCCAAAAAGAAAC.AAAAGGGGCCCGGccccccccccgccc > 1:2132679/1‑93 (MQ=255)
ctcggcgtGGCCGCGGC.G.AC.CC..GG.GCAGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTGCAGCCGc < 2:4626178/99‑1 (MQ=18)
cggcggGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTGCAGCCGCAt < 1:4081539/101‑1 (MQ=18)
cggcggGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTGCAGCCGCAt < 1:2580262/101‑1 (MQ=18)
ggcggGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTGCAGCCGCATg < 1:1013762/101‑1 (MQ=18)
ggcggGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTGCAGCCGCATg < 1:6764066/101‑1 (MQ=18)
cggGGCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTGCAGCCGCATGcc < 1:3200648/101‑1 (MQ=18)
ggggCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCCCACCCCCCGCGTATTTGCGCCCAGAAGAAAC.AAGCGGGGCCCAGCCCCCCCGCACCCGcccgccc > 2:2165089/1‑95 (MQ=12)
gggCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGt < 1:2875940/101‑1 (MQ=18)
gCCGCGGC.G.AC.CC..GG.GCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTcc < 1:6593760/101‑1 (MQ=18)
|
TAGAGTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.G.A..CC..GG.GC..GGG..CGG..G...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAC.AAGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTCC > NC_014034/1732597‑1732784
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|