| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,737,122 | +A | 1.1% | intergenic (+63/‑228) | RCAP_rcc01606 → / → RCAP_rcc01607 | tRNA/rRNA methyltransferase, SpoU family/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,737,122 | 1 | .→A | 1.1% | 4.4 ‑1.4 ‑0.0 | 265 | intergenic (+63/‑228) | RCAP_rcc01606/RCAP_rcc01607 | tRNA/rRNA methyltransferase, SpoU family/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (3/0): ref base (146/116): total (149/116) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.59e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.47e-01 | ||||||||||
Only 100 of 309 total aligned reads displayed.
ACGGGATGTTGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTGATCGAAACGGT > NC_014034/1737022‑1737222
|
aCGGGATGTTGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGAcc.gccg < 1:4606018/101‑1 (MQ=255)
gggATGTTGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCg.gg < 2:489279/101‑1 (MQ=255)
gggATGTTGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCg.gg > 1:100898/1‑101 (MQ=255)
gggATGTTGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCg.gg > 1:1219971/1‑101 (MQ=255)
gATGTTGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCg.gggg > 2:5541185/1‑101 (MQ=255)
gATGTTGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCg.gggg < 1:6450530/101‑1 (MQ=255)
aTGTTGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGc > 1:4784730/1‑101 (MQ=255)
aTGTTGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGc < 1:4061487/101‑1 (MQ=255)
aTGTTGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGc > 2:1022822/1‑101 (MQ=255)
aTGTTGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGc > 1:2790091/1‑101 (MQ=255)
tGTTGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGcc < 1:5512666/101‑1 (MQ=255)
ttGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCa < 2:5371913/101‑1 (MQ=255)
ttGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCa < 1:5770616/101‑1 (MQ=255)
tGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCaa > 2:191009/1‑101 (MQ=255)
tGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCaa > 2:3554415/1‑101 (MQ=255)
tGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCaa > 1:1517000/1‑101 (MQ=255)
gCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCaaa > 2:3446774/1‑101 (MQ=255)
cGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAg < 1:3185919/101‑1 (MQ=255)
gCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGc > 1:3055062/1‑101 (MQ=255)
cAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGcc > 2:77705/1‑101 (MQ=255)
aGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGccc < 2:2473212/101‑1 (MQ=255)
gCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCt > 1:6313542/1‑101 (MQ=255)
gCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCt > 2:4459043/1‑101 (MQ=255)
gCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCt < 2:5811628/101‑1 (MQ=255)
gCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCt < 2:6302450/101‑1 (MQ=255)
cTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTc < 2:1344270/101‑1 (MQ=255)
ttttGCCACCGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCg < 2:2282588/101‑1 (MQ=255)
cgcCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCgcacag > 2:154739/1‑96 (MQ=255)
ccAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAgcg > 1:3241015/1‑101 (MQ=255)
aGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGcgcc > 2:4809804/1‑101 (MQ=255)
gCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGcgccc > 2:3139546/1‑101 (MQ=255)
gCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGcgccc < 1:4396356/101‑1 (MQ=255)
cGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGcgcccg > 2:657900/1‑101 (MQ=255)
ggATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGcgcccgcc > 2:1091272/1‑101 (MQ=255)
aTTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGcccgcccc < 2:5176761/101‑1 (MQ=255)
aGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCcgccccgc.cc > 1:3852863/1‑101 (MQ=255)
gTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAACGGCCCTCGGCCAGCGCCcgccccgc.ccct > 1:2313662/1‑99 (MQ=255)
gTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.t > 1:1073500/1‑101 (MQ=255)
gTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.t > 2:723053/1‑101 (MQ=255)
cggcagcaccTGACTGAGGCCATCGCCGAGGTCACGGGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAGGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tg < 2:6741235/92‑1 (MQ=14)
gACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tggc > 1:5330340/1‑101 (MQ=255)
gACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tggc < 2:6406342/101‑1 (MQ=255)
aCGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tggcg < 2:5141500/101‑1 (MQ=255)
aCGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tggcg > 2:5723924/1‑101 (MQ=255)
cGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tggcgg > 2:1208121/1‑101 (MQ=255)
ggATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tggcggg > 1:3450394/1‑101 (MQ=255)
tCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGgcgc < 1:7057894/101‑1 (MQ=255)
tCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGgcgc < 2:3662650/101‑1 (MQ=255)
cggACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCt < 2:796383/99‑1 (MQ=255)
cTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCt > 2:4593262/1‑101 (MQ=255)
cTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCt > 2:4089976/1‑101 (MQ=255)
tGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCtt < 2:7027832/101‑1 (MQ=255)
gACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTtc > 1:2229238/1‑101 (MQ=255)
gACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCCtc > 1:6470832/1‑101 (MQ=255)
aCCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGTCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTtct < 1:2109693/101‑1 (MQ=255)
ccGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTtctc > 2:1713839/1‑101 (MQ=255)
cGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCCTCTc.g > 1:1785083/1‑101 (MQ=255)
cGAGGCCACCGCCGAGGTCCCGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTc.g < 1:837761/101‑1 (MQ=255)
gAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTc.gc > 1:5468237/1‑101 (MQ=255)
gAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTc.gc > 1:3107834/1‑101 (MQ=255)
aGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGGGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTc.gcc > 2:5245681/1‑101 (MQ=255)
cATTGCCGAGGTCCGGCGCAACAGTGCGGCAAAGACCGGCGG.GGGGCCCAAAGGCCCCCGGGCAGCGCCCGCCCCCC.CCC.CCGCGGGGGCCTCTt.ggccgc > 2:3212896/1‑101 (MQ=21)
cATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTc.gcccgcc < 1:2553864/101‑1 (MQ=255)
cATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTc.gcccgcc < 2:1127412/101‑1 (MQ=255)
cGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCggg < 2:1659963/101‑1 (MQ=255)
gCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCgggg > 2:5272752/1‑101 (MQ=255)
ccGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGc < 1:4231381/101‑1 (MQ=255)
cGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGcc > 1:5209128/1‑100 (MQ=255)
gAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGGGCTTCTC.GCCCGCCGGGGCAg > 2:4172511/1‑101 (MQ=255)
aGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCCCCCGGGCAgg > 2:4215747/1‑101 (MQ=255)
ggTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAggg > 2:5021027/1‑100 (MQ=255)
cACGCGCGACATTGGCCCCAGGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGcc < 2:2876056/101‑1 (MQ=255)
aCGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCg < 1:3554551/101‑1 (MQ=255)
gcgcgACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCCGGGCAGGCGCCGGc > 2:1850616/1‑101 (MQ=255)
gcgACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGccc > 2:4311889/1‑100 (MQ=255)
gcgACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCct < 1:4139403/101‑1 (MQ=255)
gaaaTTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCctct < 1:289864/98‑1 (MQ=255)
gACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTTTC.CCCCCCCGGGGGAGGGGCCGGGctcc > 1:3297200/1‑100 (MQ=17)
gACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCctct < 2:3063231/101‑1 (MQ=255)
cATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGt < 1:5653844/101‑1 (MQ=255)
aTTTGCCCCAAGACC.GCCGAGGGCCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCGCCACTGGCGGGCGCTTTTCTCCCCCCCCGGGGTGGCGGCGGCctc > 2:4648776/1‑101 (MQ=18)
aTTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGGGCTTCTC.GCCCGCCCGGGGGGGGGCCGGCCCCCGtt > 1:875036/1‑101 (MQ=14)
ttGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTg > 1:2385653/1‑101 (MQ=255)
tGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCCGGGCAGGCGCCGGCCCCTGGTgc > 2:3917099/1‑101 (MQ=255)
ccccATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCt > 2:6235995/1‑101 (MQ=255)
cccATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCCCTGTTGCGCtt > 2:3237339/1‑101 (MQ=255)
ccATGCCC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTg < 2:6039488/101‑1 (MQ=255)
ccATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTg < 1:6112850/101‑1 (MQ=255)
cATGCCC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTGa < 1:508942/101‑1 (MQ=255)
cATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTGa < 1:7095541/101‑1 (MQ=255)
aTGCCC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTGAt < 1:5995856/101‑1 (MQ=255)
tgccc.gccg.GGGGCCAAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTGATc < 2:2229143/98‑1 (MQ=255)
ggccc.gccg.GGGGCCCAAAGTCCCTCGGCCAGCCCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTGATc < 2:2313567/98‑1 (MQ=255)
gccc.gccg.GGGGCCCAAAGGCCCTCGGCCAGCTCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTGATCg < 1:4866109/99‑1 (MQ=255)
aCC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCCCTGTTGCGCTTGATCGa > 1:2589781/1‑101 (MQ=255)
gccg.GGGGCCAAAAGGCCCTGGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTGATCGAAAc < 2:2615898/101‑1 (MQ=255)
ccg.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTGATCGAAACg < 1:730280/101‑1 (MQ=255)
ccg.GGGCCCCAAGGCCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTGATCGAAACg < 2:6550759/101‑1 (MQ=255)
cg.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTGATCGAAACgg > 2:4235198/1‑101 (MQ=255)
cg.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGGTGCGCTTGATCGAAACgg > 1:1958537/1‑101 (MQ=255)
|
ACGGGATGTTGCGGCAGCTTTTGCGCCAGCGGGATTGAGGTCGACGGATCTGACCGAGGCCATCGCCGAGGTCACGCGCGACATTGGCCCCATGACC.GCCG.GGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTC.GCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCTTGATCGAAACGGT > NC_014034/1737022‑1737222
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|