| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,185,841 | +C | 100% | intergenic (+114/‑391) | mtlK → / → RCAP_rcc02028 | mannitol 2‑dehydrogenase/FeoA family protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,185,841 | 1 | .→C | 100.0% | 17.9 | 129 | intergenic (+114/‑391) | mtlK/RCAP_rcc02028 | mannitol 2‑dehydrogenase/FeoA family protein |
| Reads supporting (aligned to +/- strand): new base (26/93): ref base (7/2): total (34/95) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.07e-03 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.80e-07 | ||||||||||
Only 100 of 158 total aligned reads displayed.
CCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.G.CCCCGCACCCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCGCCCCTTTC > NC_014034/2185741‑2185938
|
ccGCCCCGGAACAGGCGGCCCAGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.g < 2:4583726/101‑1 (MQ=255)
cGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.G.c < 1:1162388/101‑1 (MQ=255)
ccccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.G.ccc < 1:5380448/101‑1 (MQ=255)
cccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.G.cccc < 2:5586145/101‑1 (MQ=255)
ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.G.ccccc < 2:1167709/101‑2 (MQ=255)
ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.G.ccccc < 1:6701794/101‑2 (MQ=255)
cGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGGGCC.G.cccccc > 2:6678920/1‑99 (MQ=255)
ggAACAGGCGGCCCCGCTCCCTCCCGGGTGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.G.cccccgc < 1:4966864/101‑4 (MQ=255)
aaCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.G.cccccgcac < 2:5941277/101‑6 (MQ=255)
aaCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.G.cccccgcac < 2:3928525/101‑6 (MQ=255)
aCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCAcc > 2:885818/1‑101 (MQ=255)
aCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCAcc < 1:2894949/101‑1 (MQ=255)
aCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCAcc < 1:2004997/101‑1 (MQ=255)
aCAGGCGGCCCCGCTCCCGCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCAcc < 2:4801910/101‑1 (MQ=255)
aGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCAcccc < 2:494161/101‑1 (MQ=255)
ggcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCAccccc < 2:160742/101‑1 (MQ=255)
ggcggcCCCCCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCATCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCAccccc < 1:4014894/101‑1 (MQ=38)
gcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGGCCC.G.cccccgccgccccc > 2:5189913/1‑91 (MQ=255)
cggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCAcccccgg > 2:6207185/1‑99 (MQ=255)
ggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCAcccccggc < 1:3559621/101‑4 (MQ=255)
gatctcGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCAcccccggc < 2:2662228/96‑4 (MQ=37)
ccccccccccccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTAt < 2:6926760/96‑1 (MQ=25)
ccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTAt < 2:3392223/101‑1 (MQ=255)
ccctccccgcCGGGCGGGCCCTCTTGAGGTGCAAGGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTAtt < 2:2296802/99‑1 (MQ=18)
cGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTAC.CGGGGGGGC.G.CCCCCCCcccccccccccgcc > 1:2662324/1‑93 (MQ=255)
gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGGGCC.GCCCCCCCACCCCCCgcgcgttt > 1:3954812/1‑94 (MQ=255)
gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTAttt < 1:6190697/101‑1 (MQ=255)
ctccctccCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTa < 2:2053227/101‑1 (MQ=255)
ctccctccCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTa < 1:2940446/101‑1 (MQ=255)
tgcctcccGGGCGGGGCGGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTTCCGAGGCGTCCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTAt < 1:1311992/99‑1 (MQ=25)
tccctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTAt > 2:5915591/1‑101 (MQ=255)
ctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATccc < 2:1772922/101‑1 (MQ=255)
tcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGGTCC.G.CCCCCCCCCCCCCCGCGGGTTTTTcccc > 2:4234620/1‑100 (MQ=255)
cccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCaa < 2:6496531/101‑1 (MQ=255)
ccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAg < 2:6255344/101‑1 (MQ=255)
cgggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGa < 1:6685308/101‑1 (MQ=255)
gggcgggGCCGCCTGATGTGTAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGaa < 2:4174269/101‑1 (MQ=37)
gggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGaa < 2:5747974/101‑1 (MQ=255)
gggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGaa < 2:4722808/101‑1 (MQ=255)
cgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGaaaaa < 1:3820657/101‑1 (MQ=255)
ggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAagca < 2:5681770/101‑1 (MQ=255)
gccgccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAagcag < 2:4220492/101‑1 (MQ=255)
gccgccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.G.CCCCCGCCCCCCCGGCGTATTTATCCCAAGAAAAagcag < 1:4331316/101‑1 (MQ=255)
ccgccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAagcagc < 1:796400/101‑1 (MQ=255)
gccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.gg < 1:6598738/101‑1 (MQ=255)
cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCt < 2:6419391/101‑1 (MQ=255)
cTGATGTGCAAAGCGGTTCCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGCATTTATCCCAAGGAAAAACAGC.GGcg > 2:4343516/1‑100 (MQ=25)
tGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCtt < 2:2597716/101‑1 (MQ=255)
aTGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGc < 1:4897975/101‑1 (MQ=255)
tgtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGcc < 2:3705855/101‑1 (MQ=255)
tgtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGcc < 1:4510249/101‑1 (MQ=255)
gtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGccc < 2:1445121/101‑1 (MQ=255)
gtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGccc < 2:1735096/101‑1 (MQ=255)
gtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.AGGGGGGCC.G.CCCCCCCCCCCCCCCCGCCTTTTTTCCACGAAAAAACAAC.GGCTGGccc > 1:6227615/1‑101 (MQ=255)
tgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGGGTCC.C.CCCCCCCCCCCCCCCGGGCTTTTTCCCACCAAAAACAACC.GGCCTGccc > 1:2812034/1‑101 (MQ=255)
tgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGcccc < 2:6536268/101‑1 (MQ=255)
cAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGa < 1:1230441/101‑1 (MQ=255)
aaaGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGGATTTATCCCAAGAAAAAGCAGC.GGCTTGTCCCCaa > 1:5638487/1‑101 (MQ=25)
aaGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAg < 1:2699992/101‑1 (MQ=255)
aGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGGGCC.G.CCCCCCCCCCCCCCGCGGCTTTTTCCCCAAAAAAAAAAGCGGGGTTGcccccacg > 1:4005322/1‑97 (MQ=255)
cGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCCGG.CCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGCAGGcc > 1:3261327/1‑101 (MQ=37)
gTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCtt < 2:3059095/101‑1 (MQ=255)
gTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCtt < 2:597194/101‑1 (MQ=255)
gTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCCTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCtt < 2:3454879/101‑1 (MQ=25)
tttCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTg < 2:4005147/101‑1 (MQ=255)
ttCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTTCCCCCGCGGCCttcg > 1:4176471/1‑99 (MQ=21)
ttCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTGt < 1:5353638/101‑1 (MQ=255)
tCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTGtt < 2:3623453/101‑1 (MQ=255)
cGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTGttt < 1:3431267/101‑1 (MQ=255)
gCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCTTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTGtttt > 1:832534/1‑101 (MQ=37)
gCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTGtttt < 2:1787695/101‑1 (MQ=255)
ccggcggTGCCGAGGCGACCCTGC.GGGGCCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTGttttgat < 2:1749330/100‑4 (MQ=37)
cggcggTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCCAAGGGCTTGttttgatg > 1:4847851/1‑97 (MQ=25)
ggcggTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATgg < 1:555829/101‑1 (MQ=37)
ggcggTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGAAGC.GGCTTGGCCCGAAGGGCTTGTTGTTgtgt > 1:2283164/1‑98 (MQ=25)
gcggTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGc < 2:6227296/101‑1 (MQ=37)
ggTGCCGAGGCGGCCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGcac < 1:5190173/101‑1 (MQ=25)
gTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCCCAAGGCTCG.TTTTGATGGcaca > 2:2304909/1‑101 (MQ=21)
gTGCCGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCACGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGcaca < 1:885842/101‑1 (MQ=37)
ccGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGa < 1:4408061/101‑1 (MQ=37)
cGAGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaa < 1:7060676/101‑1 (MQ=37)
gAGGCGACCCTGC.GGGGGCGCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaaa < 1:3566135/101‑1 (MQ=37)
aGGCGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAc < 1:4234815/101‑1 (MQ=37)
cGACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGcc < 1:402922/101‑1 (MQ=37)
gACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCg < 2:3566576/101‑1 (MQ=37)
gACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCCAAGGGCTTG.TTTTGATGGCACAAGAAAAGCCg > 1:2046490/1‑101 (MQ=25)
gACCCTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCCAAGGCCTTG.TTTTGATGGCACAAGAAACGCCg > 1:6535549/1‑101 (MQ=25)
ccTGC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAc < 1:2751019/101‑1 (MQ=37)
gC.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCCAAGGCCTTG.TTTTGATGGGACAAGAAAAGCCGAACCGc > 1:31410/1‑101 (MQ=25)
c.GGGGGCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGGCTTG.TTTTGATCGCACAAAAAAAGCCGAAACggc > 2:3291219/1‑99 (MQ=21)
gggggCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGccc > 1:4855030/1‑101 (MQ=37)
tctgCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGcccc < 2:2830474/98‑1 (MQ=37)
ggggCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGGACAAGAAACGCCGAACCGcccc > 2:5186685/1‑101 (MQ=37)
ggggCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGcccc < 1:1566177/101‑1 (MQ=37)
gggCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAAGCCCAACCGccccc > 2:73418/1‑100 (MQ=25)
gatcTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGccccc < 2:1005038/98‑2 (MQ=37)
gCTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCctt < 2:5545759/101‑1 (MQ=37)
cTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCcttt < 2:3954637/101‑2 (MQ=37)
cTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCcttt < 1:5806815/101‑2 (MQ=37)
cTCC.GCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCCAACCGCCCCcttt > 2:5491341/1‑100 (MQ=37)
|
CCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC.GGGGGCTCC.G.CCCCGCACCCCCCGGCGTATTTATCCCAAGAAAAAGCAGC.GGCTTGCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCGCCCCTTTC > NC_014034/2185741‑2185938
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|