| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,330,295 | +A | 96.8% | intergenic (+270/+42) | RCAP_rcc02161 → / ← mrcA | hypothetical protein/penicillin‑binding protein 1A |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,330,295 | 4 | .→A | 96.8% | 2.3 ‑2.4 0.0 | 93 | intergenic (+270/+42) | RCAP_rcc02161/mrcA | hypothetical protein/penicillin‑binding protein 1A |
| Reads supporting (aligned to +/- strand): new base (51/39): ref base (0/3): total (51/42) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.85e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 120 total aligned reads displayed.
TATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGG..G....GCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCT > NC_014034/2330195‑2330395
|
tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..g > 1:3538518/1‑101 (MQ=255)
tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..g > 1:1169066/1‑101 (MQ=255)
tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccggggggccgggg..g > 2:680591/1‑101 (MQ=255)
tATTTGCGACAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccggggggccgggg..g > 2:2102633/1‑101 (MQ=255)
aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gc > 2:113886/1‑100 (MQ=255)
aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gc > 1:6673074/1‑100 (MQ=255)
aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gc < 2:4033966/101‑2 (MQ=255)
tGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcgga > 1:6898405/1‑97 (MQ=255)
tGCGCCAACAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcgga < 2:5646693/101‑5 (MQ=255)
gcgcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggag > 1:1800642/1‑96 (MQ=255)
cgcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagc < 2:4880701/101‑7 (MQ=255)
cgcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagc < 2:2824134/101‑7 (MQ=255)
ccAAGAAAAAGCCGGGGCGCTCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccggggggccgggg..gcgcatccc < 1:6854596/101‑9 (MQ=255)
ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagccc > 2:1080742/1‑93 (MQ=255)
ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagccc > 1:3020236/1‑93 (MQ=255)
cAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagcccc < 2:545113/101‑10 (MQ=38)
cAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagcccc > 1:5214454/1‑92 (MQ=38)
aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagccccc > 1:2913119/1‑91 (MQ=38)
aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagccccc < 2:488404/101‑11 (MQ=38)
aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGT.CCGGG..G....Gcggagccccc < 2:3081204/101‑10 (MQ=38)
cGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGc > 2:4128519/1‑101 (MQ=25)
gcgcgcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAg < 2:324748/101‑1 (MQ=25)
gcgcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGc < 2:3696255/101‑1 (MQ=25)
ggcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGCCGGGTCGCCCAGGCa < 1:6869086/100‑1 (MQ=21)
cgcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGGGGcc > 2:6277288/1‑100 (MQ=21)
gcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGGggggg > 1:6594473/1‑98 (MQ=21)
cATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATc < 1:1453312/101‑1 (MQ=25)
aTGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGcccgcggagcg > 2:2238722/1‑92 (MQ=18)
gCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGGCGAGGCATCGcc > 2:59478/1‑101 (MQ=21)
gCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGCgggggcgcc > 1:375832/1‑94 (MQ=18)
gCGGGCCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGcc < 1:4128714/101‑1 (MQ=21)
ggggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.c < 2:1864584/101‑1 (MQ=25)
ggggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.c < 2:3142352/101‑1 (MQ=25)
cGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCCCGGGACCGCCC.CCGCGaaa > 1:6184276/1‑101 (MQ=12)
ccACCGGCCTCCCTGCCGCCTTTCCCCTGGGGCCAAAGCGCCCGGGTGTCCTGGGCCGCC..GCCCCCGGCGGCTCTCCGAGGCATCGCCT.CGGCGAAATccc < 2:6955910/100‑1 (MQ=255)
cACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGGGCCCGGGGAACGCCC.CGGCGGAAAcccc > 1:4428821/1‑100 (MQ=9)
cccGGCGGCCGGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCtt < 2:2620781/100‑1 (MQ=21)
ccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTa < 2:403946/101‑1 (MQ=25)
ccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGGGGCCTCGCCC.CTGCgccaaccccta > 2:4081402/1‑91 (MQ=12)
gcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTa < 2:6361297/101‑1 (MQ=25)
gcctcccCGGCGGGTTTCCCCTGGGGCAAAAGGACCCGGGGGGCCGGGG..GGGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTa < 1:3306320/97‑1 (MQ=12)
cggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTaa < 2:3060830/101‑1 (MQ=25)
ggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTaaa < 2:5061430/101‑1 (MQ=25)
ggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGTGCCGAGGCATCGCCC.CGGCGAAAACCCCTAGTaaa > 2:6779831/1‑101 (MQ=18)
ggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGGGCCGGGGGGTCCCCC.CGGCGGAAACCCCTTGTaaa > 1:197307/1‑101 (MQ=9)
gcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAg < 1:6986824/101‑1 (MQ=25)
cccGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGCGGGAGCGCCC.CCGCGGAAAACCCTAGTaaaaa > 1:610043/1‑99 (MQ=9)
ccGGGCGGCTTTCCCCTGGGGCCAAAGATCCGGGGGGTCGGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGAc < 1:1575091/101‑1 (MQ=21)
ccGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGAc < 1:5821915/101‑1 (MQ=25)
ccGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGAc < 2:2524808/101‑1 (MQ=25)
ccGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGAc < 1:1866282/101‑1 (MQ=25)
ccGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCACCGCCT.CGGCGAAATCCCTTAGTAAAGAc < 1:5061324/101‑1 (MQ=21)
cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGAcc < 2:4917268/101‑1 (MQ=25)
cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGGGCCGGGGGCTCGCCC.CCGGGGAAACCCCTAGTaaaaaac > 1:6786019/1‑97 (MQ=2)
cGGGCGGCTTCCACCGGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGAcc < 1:355288/101‑1 (MQ=21)
gggCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGGATCGCCTCCGGCAAAACCCCTT.GTaaaaaacc > 2:1989063/1‑96 (MQ=9)
ggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCCAGGCATCGCCC.CCGCGCAAACCCCTAGTAAAAAccccccc > 2:2372298/1‑100 (MQ=9)
gcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTGGCCGCGGCATCGCCC.CCGCGGAATCCCCTCGTTAAAAcccccccc > 1:6663816/1‑99 (MQ=9)
tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCgg < 2:3194620/101‑1 (MQ=21)
tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGGGGCACCGCCT.CGGCGGAATCCCCTAGTAAAGAAAGCCCCCgg > 2:2683063/1‑101 (MQ=12)
tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCC.CCGCCAAATCCCCTAGTAAAAACCCCCCGCgg > 1:2483668/1‑101 (MQ=12)
tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCAGCGCCC.CCGCGAAATCCCCTCGTAAAGAactcccgccg > 2:3248558/1‑99 (MQ=12)
tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCCGGGGATCGCCC.CGGCGAAAACCCCTTGTAAAAAACGCCCCCgg > 1:796967/1‑101 (MQ=2)
tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCCCCGCGGCATCGCCT.CCGCGCAAGACCGCAGTAAAAACCGCCCGCgg > 1:7070388/1‑101 (MQ=9)
ttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGGCGAGGCATCCCCT.CCGCCAAATTCCCTTCTACAGAACCCCCGCGGa > 2:2243396/1‑101 (MQ=2)
ttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGCGGGAGCGCCT.CGGCGGAAACCCCTAGTAAAAAACGCCCGCggg > 1:1524455/1‑100 (MQ=9)
ttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGCGGCATCGCCC.CCGCGCAAAACCCTAGTAAAAAccgccccccgg > 2:6556563/1‑96 (MQ=9)
ttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGGCGCCGCT.CCGCGGAATCCCCTCGTTAAGAacgccccccgc > 1:5990560/1‑96 (MQ=0)
ttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGGAGCGCCC.CCGCGGAAACCCCTAGCAAAAAACCCCCCCggg > 1:73225/1‑100 (MQ=0)
tCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGAc < 1:453115/101‑1 (MQ=21)
cACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCC.CCGCGGAAACCCCTAGTAAAAACCGCCCGCGGGCa > 2:2821029/1‑101 (MQ=12)
cACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCGTCGCCC.CGGCGAAAACCCCTAATAAAGAACGCCCGCGGAcc > 2:3780056/1‑100 (MQ=12)
aCCTGGGGCCAAAGATCCGGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAg < 1:6576892/101‑1 (MQ=21)
aCCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGGGGCATCGCCT.CGGCGGAAACCCCTAGTAAAAAACGCCCCCGGCCAg > 1:1973895/1‑101 (MQ=9)
aCCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCT.CCGCGGAAACCCCTAGTCAAAAacgccccccggccg > 2:5913006/1‑93 (MQ=9)
ccTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAgg < 2:3472152/101‑1 (MQ=21)
ccTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGCGGCAGCGCCC.CCGGGGAATCCCCTAGTAAAAAACGCCCCCGGGCacg > 1:5048408/1‑99 (MQ=2)
ccTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCT.CCGCGCAAACCCTTAGTAAAGAACGCCCGCGGACAgg > 2:6442890/1‑101 (MQ=18)
cTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAggg < 1:5458412/101‑1 (MQ=21)
cTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGCGGGCTCGCCC.CGGCGGAATCCCTCAGTCAAGAACGCCCCCGGCCCggg > 1:2291907/1‑101 (MQ=2)
cTGGGGCCAAAGAGCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAggg < 2:3845483/101‑1 (MQ=21)
tGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCCAGGCATCCCCG.CGGCGAAAAACCCTAGTAAAGAACGCCCCCGGGCAgcgg > 2:6165805/1‑98 (MQ=2)
ggggCCAAATGTCCCGGGGGTCGGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGAt < 2:244564/101‑1 (MQ=21)
ggggCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCC.CCGCGGCAACCCCTTGAAAAAAACGCCCGCGGAGAgcggg > 2:4514859/1‑97 (MQ=0)
gggCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATc < 2:6898704/101‑1 (MQ=21)
gggCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCC.CGGCGGAAACCCTTAGTAAAAAACGCCCCCGGGCAGGGagc > 1:2171409/1‑99 (MQ=9)
gggCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCC.CGGCGGAAACCCCTAGTAAAGAACCCCCGCCGACAGGGaac > 2:2566433/1‑99 (MQ=9)
ggCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATcc < 2:6663474/101‑1 (MQ=21)
ggCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCC.CCGCGAAAACCCCTAGTAAAAACCGCCCCCgggccagggacc > 2:4726457/1‑91 (MQ=9)
ccAAAGACCCCGGGGGCCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGa < 1:3666250/101‑1 (MQ=21)
aaaGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGGGCCGAGGCACCGCCC.CGGCGAAAACCCTTACTAAAAACCGCCCGCCGACAGGGATCCGCAg > 1:647815/1‑101 (MQ=12)
aaaGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGCGGCATCGCCC.CGGCGAAATCCCTTAGTAAAAACCCCCCCCGGGCAGGGATCCGCAg > 2:3890207/1‑101 (MQ=9)
aaaGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCC.CCGCGAAAACCCCTAGTAAAAAACGCCCGCGGACAggggaccgcag > 2:3614171/1‑93 (MQ=9)
aaGATCCCGGGGGTCGGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAgg < 1:4412296/101‑1 (MQ=25)
aaGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGGATCGCCC.CGGCGAAAACCCTTAGTAAAGACCGCCCCCGGGCAGGGACCCGAAgg > 2:5591370/1‑101 (MQ=12)
aaGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCC.CGGCGAAATCCCTTAGTAAAAAACCCCCCCGGACAGGGAGCCGAAgg > 1:582409/1‑101 (MQ=12)
aaGATCCCGGGGGGCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAgg < 1:2769629/101‑1 (MQ=25)
aGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGGGCCGGGGCATCGCCC.CGGCGAAAACCCTTAGTAAAGACCGCCCGCGGGCCGGGAGCCGAAggg > 1:2609330/1‑100 (MQ=12)
gATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTc < 1:535481/101‑1 (MQ=25)
g....gCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCt < 1:4370849/101‑1 (MQ=255)
|
TATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGG..G....GCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCT > NC_014034/2330195‑2330395
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|