| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,566,557 | +C | 98.4% | intergenic (+29/+165) | purD → / ← sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,566,557 | 2 | .→C | 98.4% | 3.7 ‑2.6 ‑0.4 | 255 | intergenic (+29/+165) | purD/sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): new base (71/180): ref base (3/1): total (74/181) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.49e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.18e-01 | ||||||||||
Only 100 of 298 total aligned reads displayed.
ATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAAC.GG.GG.GCGCT.GCCCCCCTC.CT..G..CTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCC > NC_014034/2566458‑2566644
|
aTGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..g < 2:2247535/101‑1 (MQ=255)
aTGCGATGGCCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..g < 1:6537275/101‑1 (MQ=255)
tGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..gg < 2:2010294/101‑2 (MQ=255)
gATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCGGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..ggcct < 1:2529884/101‑5 (MQ=38)
atcgTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..ggcctt < 2:1325268/98‑6 (MQ=38)
tGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GGGCT.GCCCCCCTC.TT..ggccttc > 1:2651264/1‑95 (MQ=255)
tGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..ggccttc < 2:5321246/101‑7 (MQ=38)
tGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..ggccttc < 2:3970458/101‑7 (MQ=38)
tGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..ggccttc < 1:2877183/101‑7 (MQ=38)
ggTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..ggccttcg < 2:3567438/101‑8 (MQ=38)
ggTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..ggcctccg < 1:1939216/101‑8 (MQ=38)
aTGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCaa < 2:6178110/101‑1 (MQ=37)
cGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GGGCT.GCCCCCCTC.CTTGG..CCTCGGCCCATTc > 2:5970852/1‑101 (MQ=255)
cGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGGCAATTc > 2:1172561/1‑101 (MQ=37)
cGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTc < 1:5837617/101‑1 (MQ=37)
cGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTc < 2:1038677/101‑1 (MQ=37)
gATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GGGCTGGCCCCCCCT.TT..GC.CTTCGGCCAATTcc > 1:6027130/1‑100 (MQ=255)
gATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCa < 2:2734722/101‑1 (MQ=37)
aTCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCCATTCAc > 2:2997201/1‑101 (MQ=37)
tCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCAcc < 2:1401243/101‑1 (MQ=37)
aCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCAccccc < 2:429156/101‑1 (MQ=25)
aCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCAccccc < 1:3988735/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTCTTT..GC.CTTCGGCCACTTCACCCCCCgg > 2:6068422/1‑101 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGatat < 2:2957829/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.CTGGG..CCTCAGCCAATTCACCCCCCCGGacat > 2:7015512/1‑101 (MQ=37)
gggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATAtt < 2:4684788/100‑1 (MQ=21)
ggtgTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATAttt < 2:6633905/98‑1 (MQ=21)
gggTTGTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTc < 1:5731627/101‑1 (MQ=21)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TTTGG..CCTCGGCCAATTCACCCCCCCGGATCTTTc > 2:1133395/1‑101 (MQ=25)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCCC.TT..GGCCTTCGGCCAATTCACCCCCCCGGGTATTTc > 2:4847750/1‑101 (MQ=21)
ggTTCTGCCGCCGCGACATCGGCTGGGGGGCGCTCTGAGACGAAAAG.GG.GG.GGGCT.GCCCCCCCC.TT..GGCCTTCGGCCCATTCCCCCCCCCGCGTATTTCg > 1:4713374/1‑101 (MQ=255)
ggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCg < 1:6697804/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGc < 2:3431092/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCCGGATATTTCGGGc > 2:3216138/1‑101 (MQ=21)
cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCa < 1:463114/101‑1 (MQ=21)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTCTTT..GC.CTTCGGCCAATTCACCCCCCCGGATATTTCGGGCAAg > 1:1795964/1‑101 (MQ=21)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAg < 1:5214826/101‑1 (MQ=21)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAg < 1:2904986/101‑1 (MQ=21)
ccgccgCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGa < 1:1342072/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGAt < 2:5073261/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGACATTTCGGGCAAGaa > 2:173144/1‑100 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATa < 1:5047668/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATa < 2:3678331/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATa < 1:3848319/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCCGGATAATTCGGGGCAGATa > 2:2562912/1‑101 (MQ=18)
ccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATaa < 2:723611/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGTGATATTTCGGGCAAGATaaa < 1:6385428/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATaaa < 1:1607458/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATaaa < 2:6787163/101‑1 (MQ=21)
caggACAGCGGCTGGCGCGCGCTCTGAGACG.AAAC.GG.GGTGCGCT.GCCCCCCTC.TT..GTCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATaaa < 2:2147433/98‑1 (MQ=21)
gcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaag < 1:5355032/101‑1 (MQ=21)
gcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaag < 1:303436/101‑1 (MQ=21)
aCATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCGAGATAaagaag < 2:317249/101‑1 (MQ=21)
aCATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaagaag < 1:5076772/101‑1 (MQ=21)
aCATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCCGGATATTTCGGGGAAGATAaagaag > 2:2384387/1‑101 (MQ=21)
aTCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGt < 1:4425903/101‑1 (MQ=21)
cGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCt > 2:5643539/1‑101 (MQ=21)
cGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCt < 1:3665733/101‑1 (MQ=21)
cGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCt < 2:3860472/101‑1 (MQ=21)
cGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGAAATTTCGAGCAAGATAAAGAAGGACt > 1:722852/1‑101 (MQ=18)
ggCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 1:4252317/101‑1 (MQ=21)
gCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAATAAGGTCttt < 2:6957642/101‑1 (MQ=21)
cttgcgcgctcTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GTCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 1:894438/98‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 2:6361469/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 2:3372018/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGGT.GCCCCCCTC.TT..GGCCTTCGGGCAATTCACCCCCCGGGAAATTTCGGCGAAGATAAAGAAGGCCTTTTc > 1:6946152/1‑101 (MQ=18)
gcgcgcgcTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt > 2:2787478/1‑101 (MQ=21)
gcgcgcTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:4426601/101‑1 (MQ=21)
gagcgcTCTGAGACG.TGAC.GGCCG.TCCCT.GCCGCCCGC.TT..GGCCTTCGGCCAAATCGCCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTATGTACCttt < 2:7052738/99‑1 (MQ=12)
gcgcTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCa < 1:2229172/101‑1 (MQ=21)
cgcTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt > 1:2331370/1‑101 (MQ=21)
gcTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 2:1218978/101‑1 (MQ=21)
gcTCTGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc > 1:7070547/1‑101 (MQ=21)
ctctGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCt < 1:1014956/101‑1 (MQ=21)
ctGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg < 1:3082905/101‑1 (MQ=21)
ctGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg < 1:3751797/101‑1 (MQ=21)
tGAGACG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGc > 1:1102326/1‑101 (MQ=21)
gagaCG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc < 2:2858374/101‑1 (MQ=21)
gaCG.AAACGGG.GG.GCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCg < 2:4081874/101‑1 (MQ=21)
aagcggg.gg.gCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat < 2:5768779/96‑1 (MQ=21)
aaacggg.gg.gCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat < 2:2494965/96‑1 (MQ=21)
aaacggg.gg.gCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat > 1:6475801/6‑101 (MQ=21)
aaacggg.gg.gCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat > 1:5450484/6‑101 (MQ=21)
ggcagg.gg.gCGCT.G.CCCCCTC.TT..GGCCTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgg > 2:1872811/5‑101 (MQ=0)
aacggg.gg.gCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata > 1:4021229/5‑101 (MQ=25)
acggg.gg.gCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAatat < 2:650406/98‑1 (MQ=25)
cagg.gg.gCGCT.G.CCCCCTC.TT..GGCCTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggg > 2:769997/3‑101 (MQ=0)
ggg.gg.gCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc > 2:5529951/2‑101 (MQ=25)
ggg.gg.gCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc < 1:5317831/100‑1 (MQ=25)
ggg.gg.gCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc > 1:2138245/2‑101 (MQ=25)
agg.gg.gCGCT.G.CCCCCTC.TT..GGCCTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg > 1:5424946/2‑101 (MQ=0)
agg.gg.gCGCT.G.CCCCCTC.TT..GGCCTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg > 1:1957994/2‑101 (MQ=0)
gg.gg.gCGCT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATccc > 1:796048/1‑101 (MQ=25)
gg.gCGCT.G.CCCCCTC.TT..GGCCTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggag > 1:1654507/1‑98 (MQ=2)
cgcT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCggggg > 1:4471253/1‑101 (MQ=25)
cgcT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCggggg > 2:2631240/1‑101 (MQ=37)
cgcT.GCCCCCCTC.TT..GGCCTCCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCgcggg < 1:5614949/101‑1 (MQ=25)
gcT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGa > 1:1211124/1‑101 (MQ=37)
cT.GCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGac > 1:3493723/1‑100 (MQ=37)
gCCCCCCTC.TT..GGCCTTCGGCCAATTCACCCCTCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGcc < 2:5257869/101‑1 (MQ=37)
|
ATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAAC.GG.GG.GCGCT.GCCCCCCTC.CT..G..CTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCC > NC_014034/2566458‑2566644
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|