| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 963,936 | +CCCC | 100% | intergenic (+23/‑78) | RCAP_rcc00874 → / → atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 963,936 | 1 | .→C | 100.0% | 145.1 | 41 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (0/40): ref base (0/0): total (1/40) | ||||||||||
| * | NC_014034 | 963,936 | 2 | .→C | 100.0% | 149.5 | 41 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (1/40): ref base (0/0): total (1/40) | ||||||||||
| * | NC_014034 | 963,936 | 3 | .→C | 100.0% | 148.3 | 41 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (1/40): ref base (0/0): total (1/40) | ||||||||||
| * | NC_014034 | 963,936 | 4 | .→C | 100.0% | 149.0 | 41 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (1/40): ref base (0/0): total (1/40) | ||||||||||
ATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCG....CCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGATGCGG > NC_014034/963838‑964019
||||
atatCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....cc < 2:5996397/101‑1 (MQ=255)
tatCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccc < 2:142637/101‑2 (MQ=255)
tatCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccc < 1:6139522/101‑2 (MQ=255)
tatCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGGCCTGAACGGCTGAGGGGGAAGGGTGGGGGGGGgccggcc > 2:3070178/1‑98 (MQ=255)
atCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....cccc < 1:2959096/101‑3 (MQ=255)
tCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccc < 2:6471940/101‑4 (MQ=255)
cGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....cccccc < 2:7095984/101‑5 (MQ=255)
cGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....cccccc < 1:1940724/101‑5 (MQ=255)
cGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....cccccc < 1:2154959/101‑5 (MQ=255)
gTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccg < 1:6967775/101‑6 (MQ=255)
gTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccg < 1:6902651/101‑6 (MQ=255)
gTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccg < 2:5433041/101‑6 (MQ=255)
tGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccga < 2:1602840/101‑7 (MQ=255)
ggcgggcgGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaa < 2:3378005/101‑8 (MQ=255)
gcgggcggGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaac < 1:741949/101‑9 (MQ=255)
gcgggcggGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaac < 1:6040942/101‑9 (MQ=255)
gcgggcggGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaac < 1:4680146/101‑9 (MQ=255)
gcgggcggGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaac < 1:3733934/101‑9 (MQ=255)
gcgggcggGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaac < 2:6195347/101‑9 (MQ=255)
gcgggcggGTGCTGGCGGCGGCCAATGCCGAGCTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaac < 1:4738229/101‑9 (MQ=255)
gggcgggTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaaccc < 2:2378992/101‑11 (MQ=255)
ggcggcggcCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAg < 2:6737286/101‑1 (MQ=255)
cggcggcCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAggg < 1:5840865/101‑1 (MQ=255)
ggcCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGccc < 1:4347657/101‑1 (MQ=255)
tccgatctaGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCg < 1:2424013/93‑1 (MQ=255)
gCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGACCCCCGAACCCCCCGCCCGAAGGGGCCCCCGGGcc > 2:5219218/1‑101 (MQ=255)
ccGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGccc < 2:4364537/101‑1 (MQ=255)
cGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGcccc < 2:4478196/101‑1 (MQ=255)
aggtcgctGCGGCGGCGATGGCGGTCCTGAACGGCTGGGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCtt < 1:3328931/94‑1 (MQ=255)
ggTGCATGCGGCGGCGATGGCGGTCCTGAACAGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTc < 1:6452454/101‑1 (MQ=255)
tgacttaggcggcgATGGCGGTCGTGAAGGACTGAGGGGGAAGGTCGGGGGGCTCCCGCCCCCCTAACGCCCCTCTCGAAGGGGCACTCGGGCCCCTTCgg < 2:1098971/94‑1 (MQ=255)
tGCATGCGGCGGCGATGGCGGTCCTGACCGGCGGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGACCCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCgg < 2:4729400/101‑1 (MQ=255)
tGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCgg < 1:958950/101‑1 (MQ=255)
ggCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCgg < 1:2575952/100‑1 (MQ=255)
cATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGAc < 2:4685180/101‑1 (MQ=255)
aTGGGGCGGCGGTGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACt < 1:2221884/101‑1 (MQ=255)
aTGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACt < 2:2974925/101‑1 (MQ=255)
gcggcggcgATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTc < 2:918273/101‑1 (MQ=255)
gggcggcgATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTcc < 1:4328543/100‑1 (MQ=255)
ggcggcgATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTccc < 1:890940/101‑1 (MQ=255)
gcggcgATGGCGGTCCTGACCGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTcccc < 1:2950483/101‑1 (MQ=255)
gcggcgATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTcccc < 1:1426839/101‑1 (MQ=255)
cggcgATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCg < 2:7120704/101‑1 (MQ=255)
ggcgATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGa < 1:5268661/101‑1 (MQ=255)
cgATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGCCGGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAgg < 2:5336315/101‑1 (MQ=255)
gCGGTCCTGAACGGCTGAGGGGGAAGGTCGNGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAtt < 1:1274579/101‑1 (MQ=255)
cGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttg < 2:1711662/101‑1 (MQ=255)
cGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttg < 2:3814496/101‑1 (MQ=255)
ggTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttgc < 1:4405985/101‑1 (MQ=255)
gTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttgcg < 1:5816076/101‑1 (MQ=255)
tCCTGACCGGCTGAGGGGGAAGGTCGGGGGTCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCTCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttgcgt < 2:5776978/101‑1 (MQ=255)
ccTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttgcgtt < 2:1056244/101‑1 (MQ=255)
ccTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttgcgtt < 1:6510673/101‑1 (MQ=255)
ccTGAACGGCGGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttgcgtt < 1:2398535/101‑1 (MQ=255)
gAACGGCGGGGGGGGAAGGGCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttgcgttgcg < 1:4880342/101‑1 (MQ=255)
gaCGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTgcgc < 2:210638/100‑1 (MQ=255)
aCGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGcgcg < 1:7076378/101‑1 (MQ=255)
gaggAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCAGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGa < 2:1255777/98‑1 (MQ=255)
gAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGc < 2:2778375/101‑1 (MQ=255)
gggAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCt < 1:4599535/101‑1 (MQ=255)
gggAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCt < 2:4633326/101‑1 (MQ=255)
gggAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCt < 2:828952/101‑1 (MQ=255)
aGGGCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGATg < 2:3615496/101‑1 (MQ=255)
tCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGATGCgg < 1:376397/101‑1 (MQ=255)
||||
ATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCG....CCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGATGCGG > NC_014034/963838‑964019
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|