| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,398,035 | 1 | .→C | 0.7% | 0.5 0.0 ‑0.4 | 414 | intergenic (+339/+1559) | RCAP_rcc01307/RCAP_rcc01309 | hypothetical protein/IS66 family transposase |
| Rejected: E-value exceeds prediction threshold. | ||||||||||
| Reads supporting (aligned to +/- strand): new base (1/2): ref base (204/207): total (205/209) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.96e-01 | ||||||||||
Only 100 of 444 total aligned reads displayed.
TCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAATTCCGC > NC_014034/1397935‑1398135
|
tctATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCa < 1:2141597/101‑1 (MQ=255)
ctATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCa.a < 2:2407438/101‑1 (MQ=255)
gggaggctagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCg < 2:3236675/101‑1 (MQ=255)
aggctagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTc > 2:6975306/1‑101 (MQ=255)
ctagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTcccc < 2:2729769/101‑1 (MQ=255)
ctagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTcccc < 2:4360832/101‑1 (MQ=255)
tagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTccccc > 1:6437922/1‑101 (MQ=255)
gggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTccccccc > 2:135248/1‑100 (MQ=255)
ggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCcgc > 1:4047740/1‑101 (MQ=255)
ggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCcgc < 1:2366142/101‑1 (MQ=255)
aggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCgg > 1:1746805/1‑101 (MQ=255)
ggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCggg > 1:3603620/1‑101 (MQ=255)
gcttCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGACACCGCCGGGCAACAAGTCCGCCAAGAAGGCG..AGCA.AGTCACTCTCCCCGCggac > 2:258344/1‑99 (MQ=25)
gctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCgggg > 1:5432183/1‑101 (MQ=255)
gctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCgggg > 1:6137303/1‑101 (MQ=255)
ctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCggggg > 2:6187268/1‑101 (MQ=255)
taCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGc > 1:1407642/1‑101 (MQ=255)
cGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGt > 2:3936880/1‑101 (MQ=255)
cGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGt < 1:5655982/101‑1 (MQ=255)
cGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGt > 2:2331354/1‑101 (MQ=255)
gCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTg > 2:5344512/1‑101 (MQ=255)
gCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTg > 1:6081682/1‑101 (MQ=255)
aCCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGa > 2:4817563/1‑101 (MQ=255)
cTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAAAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATc > 1:5104088/1‑101 (MQ=255)
ttCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:3548883/1‑101 (MQ=255)
ttCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:6649420/101‑1 (MQ=255)
ttCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:5150474/1‑101 (MQ=255)
ccccaaaGTCACACCCCCCGCGGAGGCGTGTATAAAATCCGCGGCGCCAAAAGCCAGCCAAGAACGGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGACCg < 2:2095298/97‑1 (MQ=16)
tgcggcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.CGCTGCTGACACCGCCAACAAATATGTGGTCAACACTGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:3076800/95‑1 (MQ=2)
tgcggcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.CGCTGCTGACACCGCCAACAAATATGTGGTCAACACTGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:5901071/95‑1 (MQ=2)
tCAGAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCTCCCGCGGGGGCGTGGATCGt > 1:5595387/1‑101 (MQ=255)
tCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGt > 1:6986578/1‑101 (MQ=255)
aGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCg < 1:6578700/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCggg > 2:4335885/1‑100 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTg > 2:1933749/1‑101 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCg < 1:333622/101‑1 (MQ=255)
cgcgGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGccc < 1:3503197/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCg < 2:849240/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGa > 2:67276/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGa > 1:5237665/1‑101 (MQ=255)
gggggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGAt > 1:6710885/1‑101 (MQ=255)
gggggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGAt > 2:4698507/1‑101 (MQ=255)
gggggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGAt > 2:3798566/1‑101 (MQ=255)
gggggCGTAGCTGGAAACCGCCGAGCAAAAAGCCCGCCAAGAAGCCG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATAGTAAGCGGTGCATCGGCCCGAt < 2:5505505/101‑1 (MQ=38)
ggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATaaa < 1:917987/101‑1 (MQ=255)
gggTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAAc < 1:1503319/99‑1 (MQ=255)
gTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAAccc > 1:1938364/1‑101 (MQ=255)
aTCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAt < 1:4817806/101‑1 (MQ=255)
aTCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAt < 1:4948461/101‑1 (MQ=255)
tCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAtt < 2:1646624/101‑1 (MQ=255)
gAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAtttt > 2:4170717/1‑101 (MQ=255)
gAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAtttt < 1:4715500/101‑1 (MQ=255)
aaCCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCg > 2:2191583/1‑101 (MQ=255)
aaCCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCg < 1:125646/101‑1 (MQ=255)
ccgccgCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGc < 1:6809439/101‑1 (MQ=255)
gccgcGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGccc < 2:368314/101‑1 (MQ=255)
ccgcGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGcccc > 1:2255294/1‑101 (MQ=255)
gcgcAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTg > 2:598955/1‑101 (MQ=255)
gcgcAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTg < 2:6986205/101‑1 (MQ=255)
ccgcAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTg < 2:5431911/100‑1 (MQ=255)
ggcAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGa < 2:1724569/100‑1 (MQ=255)
cgcAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCtcg < 2:2613014/101‑3 (MQ=255)
cgcAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGa < 1:2598374/101‑1 (MQ=255)
gcAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAg < 2:1407592/101‑1 (MQ=255)
cAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAgg > 2:633211/1‑101 (MQ=255)
cAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAgg < 1:1036538/101‑1 (MQ=255)
cAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAgg > 1:322900/1‑101 (MQ=255)
aaaaGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAgggg < 1:4276218/101‑1 (MQ=255)
aaaGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGa > 1:3168944/1‑101 (MQ=255)
aaaGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGa > 2:4540437/1‑101 (MQ=255)
aaGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATTAACCCCGATTTTCGGCCCCTGAGGGGaa < 1:6282502/101‑1 (MQ=255)
aGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGaaa < 2:4047564/101‑1 (MQ=255)
cccGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGa < 1:1144970/101‑1 (MQ=255)
cccGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGa < 1:5994994/101‑1 (MQ=255)
cGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGTGGAAAGAtt < 1:3864852/101‑1 (MQ=255)
gCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTc < 1:2083856/101‑1 (MQ=255)
gCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTc < 1:4983547/101‑1 (MQ=255)
ccAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCt < 2:5237399/101‑1 (MQ=255)
cAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTTtt > 1:2650064/1‑101 (MQ=255)
cAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCtt < 1:182952/101‑1 (MQ=255)
aagaagCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTg > 1:2928102/1‑101 (MQ=255)
agaagCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTgg > 2:3367683/1‑101 (MQ=255)
agaagCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTgg > 2:1046111/1‑101 (MQ=255)
gaagCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGc < 1:460209/101‑1 (MQ=255)
gaagCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGc > 1:5187538/1‑101 (MQ=255)
aagCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGca > 2:4657107/1‑101 (MQ=255)
aagCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGca > 2:5668465/1‑101 (MQ=255)
agCCG..AGCC.AGGCGCGCCCCCCGCGGGTGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGcac < 1:709407/101‑1 (MQ=25)
gCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGcaca < 2:5629672/101‑1 (MQ=255)
gCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGcaca < 2:4951407/101‑1 (MQ=255)
gg..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATGGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAAt > 1:3721741/1‑101 (MQ=255)
g..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAAtt > 2:7106957/1‑101 (MQ=255)
g..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAAtt < 2:1822788/101‑1 (MQ=255)
aGCA.AGTCGCGCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAATTc < 2:5787568/101‑1 (MQ=255)
gCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAATTcc < 2:6852469/101‑1 (MQ=255)
cA.AGTCGCTGCCCCCGCGGGGGCGTTGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAATTCcg < 2:2270381/101‑1 (MQ=255)
cA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGCGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGCTTCTTGGCACAATTCcg > 2:1240585/1‑101 (MQ=255)
a.aGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAATTCcgc < 2:2927993/101‑1 (MQ=255)
a.aGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAATTCcgc > 1:3060085/1‑101 (MQ=255)
a.aGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAATTCcgc > 1:50394/1‑101 (MQ=255)
|
TCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGG..AGCA.AGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAATTCCGC > NC_014034/1397935‑1398135
Base quality scores:
ATCG
< 3 ≤
ATCG
< 22 ≤
ATCG
< 30 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|