Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 1,395,685 | C→A | 5.6% | intergenic (+497/‑434) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 1,395,685 | 0 | C→A | 5.6% | 38.3 0.0 ‑0.0 | 374 | intergenic (+497/‑434) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (12/9): ref base (193/159): total (206/168) | ||||||||||
Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.02e-01 |
Only 100 of 429 total aligned reads displayed.
GCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGT > NC_014034/1395585‑1395785
|
gCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..Gc < 2:4445359/101‑1 (MQ=255)
gTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAg > 1:116810/1‑101 (MQ=255)
tGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGt > 1:3016505/1‑101 (MQ=255)
ggATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGtt > 2:2118791/1‑101 (MQ=255)
ggATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGtt > 1:2364458/1‑101 (MQ=255)
gATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTc < 1:1351721/101‑1 (MQ=255)
gATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTc < 1:2178424/101‑1 (MQ=255)
aTCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCg < 2:2617516/101‑1 (MQ=255)
aTCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCg < 1:1870073/101‑1 (MQ=255)
tCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGCAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTTCATGTAGTCGGCG.G..GCAGTTCGa > 2:832486/1‑101 (MQ=255)
tCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCCAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGa > 1:4743419/1‑101 (MQ=255)
cGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCTAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.g < 1:6228843/101‑1 (MQ=255)
gAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.Gc < 1:6592525/101‑1 (MQ=255)
aaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCg < 1:6678770/101‑1 (MQ=255)
aaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCg > 2:4010374/1‑101 (MQ=255)
tcagtcatGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGc > 2:3267065/8‑101 (MQ=255)
accaccTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGc > 1:5997708/1‑101 (MQ=255)
ccaccTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCa > 2:6783074/1‑101 (MQ=255)
caccTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAg > 2:3810991/1‑101 (MQ=255)
ccTTGCGGATTGTCACTGGCGCGGGGCAAATCGTCGCACCCCACGCGGGGACGAGAATCGAAACATCTGAATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTc < 2:1269876/101‑1 (MQ=255)
cTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCg > 2:4309167/1‑101 (MQ=255)
tGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCt < 2:1808573/101‑1 (MQ=255)
gCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTc < 1:4569561/101‑1 (MQ=255)
gCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTc < 2:2548758/101‑1 (MQ=255)
gCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTc > 1:5771691/1‑101 (MQ=255)
gggATTGTCACTTTCGCGGGGCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTcc < 2:5892530/100‑1 (MQ=255)
cGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTcc > 2:1004178/1‑101 (MQ=255)
aTTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGGG.G..GCAGTTCGA.GCCGCAGTCGCTccccc > 1:4977694/1‑101 (MQ=255)
aTTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTccccc > 2:1520442/1‑101 (MQ=255)
ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTcccccc < 2:3452774/101‑1 (MQ=255)
ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTcccccc < 2:476159/101‑1 (MQ=255)
ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTcccccc < 2:1891281/101‑1 (MQ=255)
tGTCACTTTCGCGGGGCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCcg < 2:5631423/101‑1 (MQ=255)
gTCGCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCcgc > 1:6825014/1‑101 (MQ=255)
gTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCcgc > 2:6723088/1‑101 (MQ=255)
gTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCcgc < 2:6088594/101‑1 (MQ=255)
cACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCgg > 1:6461341/1‑101 (MQ=255)
cTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGTgggg > 1:3200085/1‑101 (MQ=255)
cTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCgggg > 2:1408783/1‑101 (MQ=255)
ttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGc > 1:1844897/1‑101 (MQ=255)
tggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GC.GAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGt > 1:2251706/11‑101 (MQ=2)
ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GC.GAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTg > 2:1700774/10‑101 (MQ=2)
ggggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGa > 1:2488067/1‑101 (MQ=255)
gggccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GC.GAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTgg < 1:1446459/93‑1 (MQ=2)
gggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:2771258/101‑1 (MQ=255)
tcactcgagccGCTCCCCCCGGGGGGGCGTGGTGCAAAACATCGGCTTGTCCGCTTCGAA..CCTGGTCGC.GTCGCCGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:2322139/91‑1 (MQ=2)
ggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATc > 1:5195755/1‑101 (MQ=255)
cGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGa > 1:1221912/1‑101 (MQ=255)
cGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:436388/101‑1 (MQ=255)
gctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GC.GAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGa > 2:2845132/4‑101 (MQ=2)
gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:6177682/1‑101 (MQ=255)
gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:1940605/1‑101 (MQ=255)
gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:105771/1‑101 (MQ=255)
gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:673089/1‑101 (MQ=255)
gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:461645/1‑101 (MQ=255)
aaGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:5418038/1‑101 (MQ=255)
tgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GC.GAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:3942573/2‑101 (MQ=2)
cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCGGCAGTG.GCAGGTTTTCCA.GCGGC.GTCGCTCCCCCCGCGGGGGCGTGGAGCGAAAcc > 2:6877772/1‑100 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgg < 1:6899952/101‑1 (MQ=255)
gTCGCCCCCCTCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTAGATCGAAACTgg < 1:5082973/101‑1 (MQ=255)
gTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgg < 1:2600059/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGCGGATCGGAACTGGTAt > 2:5088065/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACACCTGCATGTAGTGGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTAt < 2:5748848/101‑1 (MQ=255)
tCCCCCCGGGGGGGCGTGGATCGAAACATCTGCATGTAGCCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATgg < 1:832510/101‑1 (MQ=255)
cccccGCGGGGGCGGGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGAt < 2:523025/101‑1 (MQ=255)
cccGCGGGGGCGTGGACCGAACCACCTGTTTGTAGCCGCCG.G..CAGGTACGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCt < 1:976290/101‑1 (MQ=21)
ccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTg > 2:1213817/1‑101 (MQ=255)
cgcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTgg < 2:4579664/101‑1 (MQ=255)
gggggCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgcgc > 2:4899301/1‑101 (MQ=255)
gggGGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAACCTGGTATGGATCTGGCGCaa > 1:5621309/1‑101 (MQ=255)
gTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACgg > 1:4252927/1‑101 (MQ=255)
gTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACgg > 1:2791315/1‑101 (MQ=255)
gggATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTGGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGa < 2:6298452/100‑1 (MQ=255)
gATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATGGAAACTGGTATGGATCTGGCGCAAACGGaaa > 1:4557292/1‑101 (MQ=255)
acaaaacgctCTGCCTGTCGTGGCGG.G..GAAGTGGGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAg < 2:1640120/92‑1 (MQ=21)
cGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTc > 2:6994369/1‑101 (MQ=255)
aaCATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgt < 1:3987715/101‑1 (MQ=255)
aaCATCTGCATGTAGGCGGGG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgt < 1:1107614/101‑1 (MQ=255)
aaCATCTGCATGTAGGCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgt < 1:4309389/101‑1 (MQ=255)
aCATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtc < 2:2916430/101‑1 (MQ=255)
cATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcg < 1:6327812/101‑1 (MQ=255)
aTCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTNTGGATCTGGCGCAAACGGAAAGTCTgtcgt > 1:1984913/1‑101 (MQ=255)
aTCTGCATGTAGGCGGGG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgt < 1:6077143/101‑1 (MQ=255)
cTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgtcc > 1:1668764/1‑100 (MQ=255)
cTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGGCTGtcgtcg > 2:4103895/1‑101 (MQ=255)
cTGCATGGAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGtcgtcg < 1:5368326/101‑1 (MQ=255)
cTGCAGGTAGGCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGtcgtcg < 2:3415184/101‑1 (MQ=255)
aTGTGGGCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcc < 1:670441/101‑1 (MQ=255)
tAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTccccc < 2:6461011/101‑1 (MQ=255)
tAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTccccc > 1:3595339/1‑101 (MQ=255)
agccgggg.g..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcccccc < 2:6594548/98‑1 (MQ=255)
ggcggcg.g..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCcg < 2:4673463/99‑1 (MQ=255)
gTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCcg > 1:387934/1‑101 (MQ=255)
ggcg.g..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCgg > 2:5031797/1‑101 (MQ=255)
cg.g..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCgggg > 2:3157127/1‑101 (MQ=255)
g.g..gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCggggg > 2:3620416/1‑101 (MQ=255)
g.g..gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCggggg > 1:3264346/1‑101 (MQ=255)
g..gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGc < 1:1536426/101‑1 (MQ=255)
gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCg < 1:4054116/101‑1 (MQ=255)
cAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGt < 1:3440553/101‑1 (MQ=255)
|
GCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G..GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGT > NC_014034/1395585‑1395785
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|