| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,864 | T→C | 7.9% | intergenic (+676/‑255) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,864 | 0 | T→C | 7.9% | 72.3 ‑1.2 ‑0.8 | 452 | intergenic (+676/‑255) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (14/22): ref base (203/211): total (217/235) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.97e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.43e-01 | ||||||||||
Only 100 of 480 total aligned reads displayed.
GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTG > NC_014034/1395764‑1395964
|
gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt < 1:5032050/101‑1 (MQ=255)
gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt < 2:4476674/101‑1 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGAGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGcg.cc > 1:5096791/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.Ct < 2:1103467/101‑1 (MQ=255)
gcgGGGGCGTGGATTGAAAGCCGCGGGGACGGTGGGCAGTGAAAGCGGCGGTGGACGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCG.CCGC.CTATc < 2:1917150/101‑1 (MQ=16)
gcgGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATc < 1:6775150/101‑1 (MQ=255)
gggCGTGGATCGAAACGTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCAt < 2:4559426/101‑1 (MQ=255)
gggCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCAt < 2:714684/101‑1 (MQ=255)
ggCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATc < 2:534464/101‑1 (MQ=255)
gCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATcc < 1:3924827/101‑1 (MQ=255)
cGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCg < 2:5069139/101‑1 (MQ=255)
gTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATcccg > 2:1002927/1‑99 (MQ=255)
tGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...t > 2:3591833/1‑101 (MQ=255)
ggATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...Tc < 2:1537139/101‑1 (MQ=255)
gATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCg < 2:3370767/101‑1 (MQ=255)
aTCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGa > 1:666447/1‑101 (MQ=255)
tCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAg < 1:1461541/101‑1 (MQ=255)
aaaCCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAgcgc > 1:2365769/1‑101 (MQ=255)
aaaCCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAgcgc < 2:1425726/101‑1 (MQ=255)
aaaCCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAgcgc > 2:6606208/1‑101 (MQ=255)
aaaCCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAgagc > 2:939758/1‑101 (MQ=255)
ccTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGcgc.c.gc < 2:5394707/101‑1 (MQ=255)
gAGTTGCCAGTTATAGACGCCGTGGACGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTc < 2:5688779/101‑1 (MQ=255)
tGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTccccc > 1:1153256/1‑101 (MQ=255)
gCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTcccccc < 2:2963274/101‑1 (MQ=255)
ccAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCcg < 2:557807/101‑1 (MQ=255)
ccAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCcg < 2:2349701/101‑1 (MQ=255)
aTAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCggggg > 2:5188918/1‑101 (MQ=255)
aCGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTg < 1:3772078/101‑1 (MQ=255)
gccaacctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGCCCTC.GCG.C...GTCGCTCCCCCCGCGGGGGCGTgg < 2:6316965/91‑1 (MQ=9)
gccaacctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTgg < 1:3254366/91‑1 (MQ=9)
gccaacctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTgg > 2:2665653/11‑101 (MQ=9)
ccggcccggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGC.C.GCT.G.C.GTCGCTCCCCCCGCGGGGGCg > 1:4052645/10‑101 (MQ=2)
cGCGGTGGACGTCCCTCCCCCCGTGGGGGCGGGGATCGAACCTGCG.CCAC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTgg < 2:4070035/101‑1 (MQ=38)
gCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGa > 1:1726573/1‑101 (MQ=255)
gCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGa > 2:4661403/1‑101 (MQ=255)
gCCGTGGACGTCGATCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGa > 2:1707508/1‑101 (MQ=255)
cggcccggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGC.C.GCT.G.C.GTCGCTCCCCCCGCGGGGGCGt > 1:1967288/9‑101 (MQ=2)
ccatcctaggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGa < 1:3586215/92‑1 (MQ=9)
ccGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGAt < 1:4839583/101‑1 (MQ=255)
caacctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGAt > 1:5442037/9‑101 (MQ=9)
caacctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGAt > 1:3109116/9‑101 (MQ=9)
gcccggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGC.C.GCT.G.C.GTCGCTCCCCCCGCGGGGGCGTgg < 1:3399308/95‑1 (MQ=2)
cGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:6020280/101‑1 (MQ=255)
aacctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGATc > 1:4456625/8‑101 (MQ=9)
aacctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGGGGATc > 1:5350814/8‑101 (MQ=9)
gTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:4813314/1‑101 (MQ=255)
ccggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGC.C.GCT.G.C.GTCGCTCCCCCCGCGGGGGCGTGGAt > 2:5117400/5‑101 (MQ=2)
ccggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGC.C.GCT.G.C.GTCGCTCCCCCCGCGGGGGCGTGGAt < 2:6999633/97‑1 (MQ=2)
ggACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:4734872/1‑101 (MQ=255)
ggACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:3868151/101‑1 (MQ=255)
cggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGC.C.GCT.G.C.GTCGCTCCCCCCGCGGGGGCGTGGATc < 2:1357672/98‑1 (MQ=2)
ccccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGCGCGCCAT.GAATTC.A...TCGAGCGC.CATCGAG.C.GTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:6492509/98‑1 (MQ=2)
tatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCGCC.C.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 1:1899076/4‑101 (MQ=2)
ggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGC.C.GCT.G.C.GTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:96252/99‑1 (MQ=2)
ggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGC.C.GCT.G.C.GTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:1100936/3‑101 (MQ=2)
atgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 1:5839722/99‑1 (MQ=9)
atgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 1:6392523/99‑1 (MQ=9)
tgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca < 2:1266167/100‑2 (MQ=9)
tgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca > 2:5975960/2‑100 (MQ=9)
cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACg > 2:3250990/1‑101 (MQ=255)
cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACg < 1:1287205/101‑1 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGCGCGCCAT.GAATTC.A...TCGAGCGC.CATCGAC.C.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 1:3702897/101‑1 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGa > 2:438729/1‑101 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGAt > 2:2445926/1‑101 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATg > 1:29932/1‑101 (MQ=255)
cGCCCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATg < 2:1659801/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGc < 1:4658666/101‑1 (MQ=255)
ctcgcgccGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.CTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCg < 2:5855268/95‑1 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAACCTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCg < 2:2026815/101‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCCCGGGGGCGCGGATCGAAACGAGGCg > 1:1793627/1‑101 (MQ=255)
cTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCg > 1:3513174/1‑101 (MQ=9)
tCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGt > 2:2631060/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGtt > 1:6938221/1‑101 (MQ=255)
caccccGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggc < 2:4147385/99‑3 (MQ=9)
caccccGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggc > 1:596005/3‑99 (MQ=9)
accccGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcg > 2:1042178/2‑98 (MQ=9)
ccccGGGGGGGCGGGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCa < 1:4169571/101‑1 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCa < 2:6411699/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATg > 1:1623534/1‑101 (MQ=255)
ccGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGC.C.GCT.G.C.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcaccccgaac < 2:6021689/101‑10 (MQ=2)
cgcgGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTTGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATgg < 2:3442887/101‑1 (MQ=255)
cgcgGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATgg < 2:3635104/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcgggcc > 1:1394390/1‑92 (MQ=2)
cgGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGcc > 1:3851113/1‑101 (MQ=255)
gggggCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcgggcct < 2:6124289/101‑11 (MQ=2)
gggggCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.C.C.TCG.C.ACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcgggcct < 2:6875624/101‑11 (MQ=2)
gggggCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCt > 1:558831/1‑101 (MQ=255)
gggCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTAc < 1:288914/101‑1 (MQ=255)
gggCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTAc < 1:2713429/101‑1 (MQ=255)
gggCGCTGATCGAACCTGCC.CCGC.CTGCCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCttc < 2:6725519/101‑3 (MQ=25)
gCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGt < 1:1002962/101‑1 (MQ=255)
cGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTc > 2:4003795/1‑101 (MQ=255)
cGTGGATCGAAACGGCG.CCGC.CTAGCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTc < 2:2234096/101‑1 (MQ=255)
tGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCgg > 1:2071116/1‑101 (MQ=255)
aaaCTGCT.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTgg < 2:5621019/101‑1 (MQ=255)
aaaCTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGGAGGgg > 1:250248/1‑101 (MQ=255)
aaaCTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTgg > 1:4298060/1‑101 (MQ=255)
aaaCTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTgg < 1:5723332/101‑1 (MQ=255)
cTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGCCt > 2:788534/1‑101 (MQ=255)
|
GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGC.C.GCG.C.A.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTG > NC_014034/1395764‑1395964
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|