BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,787,352	G→C	2.2%	intergenic (+77/+150)	RCAP_rcc01649 → / ← RCAP_rcc01650	ABC transporter ATP‑binding protein/ABC transporter permease

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,787,352	0	G→C	2.2%	5.8 ‑2.4 ‑0.2	271	intergenic (+77/+150)	RCAP_rcc01649/RCAP_rcc01650	ABC transporter ATP‑binding protein/ABC transporter permease
Reads supporting (aligned to +/- strand): new base (6/0): ref base (168/97): total (174/97)
Fisher's exact test strand distribution p-value = 9.13e-02
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.48e-01

Only 100 of 328 total aligned reads displayed.


CCGGCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGCCTTTGGGGCCCTCGGCGGTCA  >  NC_014034/1787252‑1787452


ccGGCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCg                                                                                                           <  1:187841/101‑1 (MQ=255)


 cGGCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGc                                                                                                          <  2:3095212/101‑1 (MQ=255)


 cGGCGCGGCGGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGc                                                                                                          <  2:5390007/101‑1 (MQ=255)


  ggCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCa                                                                                                         <  1:4883479/101‑1 (MQ=255)


  ggCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCa                                                                                                         <  1:5194821/101‑1 (MQ=255)


     gcgGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGc                                                                                                      >  1:4118689/1‑101 (MQ=255)


     gcgGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGc                                                                                                      <  1:2048465/101‑1 (MQ=255)


       ggCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCgg                                                                                                    <  2:4831362/101‑1 (MQ=255)


        gCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCggg                                                                                                   >  2:1175523/1‑101 (MQ=255)


        gCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCggg                                                                                                   >  1:2886979/1‑101 (MQ=255)


         cTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGa                                                                                                  >  2:4329612/1‑101 (MQ=255)


          tGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGAc                                                                                                 <  1:4749998/101‑1 (MQ=255)


            aGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACag                                                                                               >  2:1211027/1‑101 (MQ=255)


            aGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACag                                                                                               <  1:1051415/101‑1 (MQ=255)


              ggAGGGGTGCGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACagag                                                                                             <  1:1162932/100‑1 (MQ=255)


                aGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGc                                                                                           >  2:128226/1‑101 (MQ=255)


                aGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGc                                                                                           >  2:3988196/1‑101 (MQ=255)


                 ggggTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGcc                                                                                          >  1:3755821/1‑101 (MQ=255)


                  gggTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.t                                                                                        <  1:2126575/101‑1 (MQ=255)


                   ggggAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.Tg                                                                                       <  1:5340653/98‑1 (MQ=255)


                   ggTCAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCTGCAAGCGGGACAGAGGCC.Tg                                                                                       >  1:5611820/1‑101 (MQ=255)


                      gAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.Tgcgc                                                                                    >  1:3409037/1‑101 (MQ=255)


                             gTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGccc                                                                             >  2:6083928/1‑101 (MQ=255)


                             gTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGccc                                                                             <  1:5733949/101‑1 (MQ=255)


                              tttCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGccc.c                                                                           >  1:689517/1‑101 (MQ=255)


                              tttCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGccc.c                                                                           >  1:5673143/1‑101 (MQ=255)


                               ttCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.cg                                                                          >  2:6785752/1‑101 (MQ=255)


                                 cGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.cggc                                                                        >  1:1712075/1‑101 (MQ=255)


                                 cGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.cggc                                                                        >  2:6221560/1‑101 (MQ=255)


                                     cGGATCGGGAAAGGCACTGCCTTTCCCCGCCCGCTGGCGCATCACCTGTGCCAAGACCGTTTCCCCAAGCACGACAGAGGCC.TTTTCCCCGccc.cccccgc                                                                     >  1:6678489/1‑95 (MQ=25)


                                      ggATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGgcgc                                                                   >  1:3144484/1‑101 (MQ=255)


                                      ggATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGgcgc                                                                   >  2:499910/1‑101 (MQ=255)


                                      ggATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGgcgc                                                                   >  1:4177920/1‑101 (MQ=255)


                                       gATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGcgcg                                                                  >  2:6337860/1‑101 (MQ=255)


                                       gATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGcgcg                                                                  >  1:4037806/1‑101 (MQ=255)


                                         ccAGGAAAGCCCCCGCCTTCCCCCGCCCG.TAGCGCAGCAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGaa                                                                <  1:6311467/100‑1 (MQ=18)


                                          cAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAAt                                                               <  2:3374324/101‑1 (MQ=255)


                                          cAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCAGCCC.CGGCGGCGCGAAt                                                               <  1:2400495/101‑1 (MQ=255)


                                            ggAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATgc                                                             >  1:3970259/1‑101 (MQ=255)


                                             gAAAGGCACCGCCTTCCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATgcg                                                            <  2:2985618/101‑1 (MQ=255)


                                              aaaGGCACTGCCTTTCCCCGCCCGCTGGCGCATCACCTGTGCCAAGACCGTTTCCCCAAGCACGACAGAGGCCTTTCGCCCCGCCCACCgcggcgaacgcg                                                              >  2:5716631/1‑95 (MQ=25)


                                               aaGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGcgcc                                                          >  1:5883182/1‑101 (MQ=255)


                                                agtcccctcttttCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGcgccc                                                         <  1:3081306/91‑1 (MQ=255)


                                                  gccccGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGcgcccgc                                                       <  1:4551984/98‑1 (MQ=255)


                                                   cACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGcgcccgcc                                                      >  2:360818/1‑101 (MQ=255)


                                                    ccccccTTCCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCa                                                     <  2:1089780/97‑1 (MQ=255)


                                                    cccGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCa                                                     <  2:2886870/100‑1 (MQ=255)


                                                    cccGCCTTCCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCa                                                     <  2:235490/100‑1 (MQ=255)


                                                     cccccTTCCCCCGCCGG.TATCGCAACAGCCGCGGCATGCCCGTTCCCGCAGGCGGGACAGAGGCC.TGCGCCCCGCCC.CGGCGGCGCGAATGCGCCCGCCAt                                                    <  2:5142248/98‑1 (MQ=17)


                                                      ccccTTCCCCCCCCGG.TATCGCAACAGCCGCGGCATGCCCGTTCCCGCAGGCGGGACAGGGCCC.GGCGCCCCGCCC.GGGCGGCGCGAATGCGCCCGCCATg                                                   <  2:2009208/99‑1 (MQ=17)


                                                       gCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGACGCGAATGCGCCCGCCATgg                                                  >  1:5629787/1‑101 (MQ=255)


                                                        ctttcccccGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATggg                                                 <  1:3837595/96‑1 (MQ=255)


                                                        ccTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATggg                                                 >  2:2533900/1‑101 (MQ=255)


                                                           ttCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATgggcgg                                              >  2:4606041/1‑101 (MQ=255)


                                                            tCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATgggcggg                                             >  1:6110890/1‑101 (MQ=255)


                                                               ccgcccg.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATgggcggggcg                                          >  1:4646750/1‑101 (MQ=255)


                                                                  cccg.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCCTGGgcggggcgggg                                       >  2:6237740/1‑100 (MQ=255)


                                                                  cccg.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGgggcgggc                                       <  1:1575208/101‑1 (MQ=255)


                                                                    cg.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGgggc                                     >  2:2022662/1‑101 (MQ=255)


                                                                    cg.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGgcgc                                     >  1:936182/1‑101 (MQ=255)


                                                                    cg.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGgcgc                                     >  1:6758987/1‑101 (MQ=255)


                                                                    cg.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGgcgc                                     >  2:2247860/1‑101 (MQ=255)


                                                                     g.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGgggcc                                    >  1:4423093/1‑100 (MQ=255)


                                                                     ctcaccgaaaCATCGGCGGCATGACCGTTGCCGCAAGCGAAATAGAGGCC.TTCGCTCCGCCC.GGGCGTCGCTAATGCGCCCGCCATGGGCGGGGCGGgcgc                                     <  2:2122560/93‑1 (MQ=12)


                                                                       tATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGGGCAg                                   >  1:1815542/1‑101 (MQ=255)


                                                                       tATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGGGCAg                                   >  1:6175099/1‑101 (MQ=255)


                                                                       tATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAg                                   >  1:5441278/1‑101 (MQ=255)


                                                                        aTCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCCCCCGCCATGGGCGGGGCGGgcgcccg                                  >  1:2997068/1‑98 (MQ=255)


                                                                          cGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGcc                                <  2:7069029/101‑1 (MQ=255)


                                                                           gCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCCGGGC.g                              >  1:5968366/1‑101 (MQ=255)


                                                                            cAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGgcggggcggggggcgggcgg                              >  2:6494788/1‑91 (MQ=255)


                                                                             aaCAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCCGGGC.ggg                            >  1:3522549/1‑99 (MQ=255)


                                                                              aCACCCGCGGCGTGCCCGTTGCCGCAAGGGGGAGAGAGGCC.TGCGCTCCGCCG.CGGCGGCGCGAGTGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.gg                         <  1:1224886/101‑1 (MQ=17)


                                                                               cggCCGCGGCATGACCGTTCCCGCAAGCGGGACAGAGGCC.TGCCCCCCGCCC.CGGCGGCGCGAATGCCCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.ggg                        <  1:4845129/99‑1 (MQ=17)


                                                                               caggggcgGCACGCCCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.GGGCGGGGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.ggg                        <  1:3231501/96‑1 (MQ=17)


                                                                               cAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGGGCCGGCC.G.G.ggg                        >  1:2506663/1‑101 (MQ=255)


                                                                                ggCCGCGGCATGACCGTTCCCGCAGGCGGGACAGAGGCC.GGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGc                       <  2:4177725/100‑1 (MQ=255)


                                                                                aGCCGCGGCATGCCCGTTCCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGc                       <  1:3435357/101‑1 (MQ=255)


                                                                                 gCCGCGGCATGACCGTTTCCGCAAGCGGGACAGATGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGcc                      >  1:7124752/1‑101 (MQ=255)


                                                                                 gCCGCGGCAGGCCCGTTCCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGcc                      <  1:6518430/101‑1 (MQ=255)


                                                                                  ccGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGGGGGCGCAGGCC.G.A.ggggcg                     >  2:6942075/1‑98 (MQ=255)


                                                                                    gcgcgaTGCCCTTTTCCGCAAGGGGGACAGAGGCC.TGCGCCCCCCCC.CGGCGGCGCGAATGCCCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGCCttt                   <  1:2247955/96‑1 (MQ=14)


                                                                                     cgGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGGCGGCC.G.A.GGGCCCTTg                  >  1:2336358/1‑101 (MQ=255)


                                                                                     cgGCATGACCGTTCCCGCAAGCGGGACAGAGGCC.TGCGCCCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGCCTTTg                  <  1:6226045/101‑1 (MQ=255)


                                                                                       gCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGGGCCGGCCGG.G.GGGCCTTTgg                 >  2:5950569/1‑101 (MQ=18)


                                                                                       gCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCCGGCC.G.A.GGGGCCTTggg                >  1:1446883/1‑101 (MQ=255)


                                                                                         aTGCCCGTTCCCGCAAGCGGGACAGAGGCC.TGCGCCCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGCCTTTGGGGc              <  1:6442448/101‑1 (MQ=255)


                                                                                           gACCGTTTCCGCAGGCGGGACAGAGGCC.GGCGCCCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGCCTTTGGGGccc            <  2:55334/101‑1 (MQ=255)


                                                                                           gACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCCGGCC.G.A.GGGGCCTTGGGGgcc            >  2:6570682/1‑101 (MQ=17)


                                                                                           gACCGTTTCCCCAAGCGCAACAAAGGCC.TGCGTCCCGCCC.CGGCGGCGCGAATGCGCCCGCCGATGGCGGGGCGGGCCGAGGGA.C.A.GGGCCCCTTGGGccc            >  2:4519823/1‑101 (MQ=14)


                                                                                            aCCGTTTCCGCAGGGGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGCCTTTGGGGCCCt           <  2:5629497/101‑1 (MQ=255)


                                                                                             ctgTTTCCGCAAGCGGGACGGGGGCC.TGCGCCCCGCCC.CGGGGGCGCGAAGGCTCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGCCTTTGGGGCCCTc          <  2:1380248/99‑1 (MQ=14)


                                                                                             cctttcccGCAGGGGGAACGGGGGCC.GGCGCTCCGCCC.GGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGCCTTTGGGGCCCTc          <  2:4038590/95‑1 (MQ=14)


                                                                                             ccGTTCCCGCAGGGGGGCCAGAGCCC.TGCGCTCCCCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGCCTTTGGGGCCCTc          <  2:4130116/101‑1 (MQ=17)


                                                                                              cGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGGGCCGGCC.C.A.GGGGCCTTTGGGCCCTcg         >  2:891716/1‑101 (MQ=14)


                                                                                              cGTTCCCGCAGGCGGGACAGGGGCC.GGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGCCTTTGGGGCCCTcg         <  2:1712011/101‑1 (MQ=17)


                                                                                               gTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGGAGGCC.G.AGGGGCGTTTGGGGCCCCcg         >  2:3185313/1‑101 (MQ=17)


                                                                                                 tcccGCAGGCGGGACAGAGGCC.GGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGCCTTTGGGGCCCTcggcg      <  1:4269134/99‑1 (MQ=255)


                                                                                                  tCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCCCCGGCC.G.A.CGGGCTCTGGGGCCCTctgcgg     >  2:3781420/1‑101 (MQ=17)


                                                                                                    cGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGGC.GCG.GGGCCTTGGGGGCCCCcgggggc    >  2:5320650/1‑100 (MQ=14)


CCGGCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCG.TATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCC.TGCGCTCCGCCC.CGGCGGCGCGAATGCGCCCGCCATGGGCGGGGCGGGCGCAGGCC.G.A.GGGCCTTTGGGGCCCTCGGCGGTCA  >  NC_014034/1787252‑1787452

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG