| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,316 | A→C | 3.6% | intergenic (‑112/‑193) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,316 | 0 | A→C | 3.6% | 22.8 0.0 ‑0.5 | 392 | intergenic (‑112/‑193) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (7/7): ref base (182/195): total (190/202) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.10e-01 | ||||||||||
Only 100 of 407 total aligned reads displayed.
CATTGGTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTG.CCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCG.CCCCCTTCGCGGGCGGCCGCGACG > NC_014034/2249217‑2249415
|
cATTGGTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGa < 1:4690510/101‑1 (MQ=255)
ttGGTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAgg > 1:1003442/1‑101 (MQ=255)
ttGGTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAgg > 2:551654/1‑101 (MQ=255)
tccgatctCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAgg < 2:5219635/94‑1 (MQ=38)
ggTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCa < 1:5361363/101‑1 (MQ=255)
gtTCTTGAGATGCACAGATACCGCAGCTTGGGCCCCCGGGGCAAGAAGGGGCCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGATGCAAGa < 2:6235548/101‑1 (MQ=255)
gtTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGa > 1:684217/1‑101 (MQ=255)
ttCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGAt > 1:595637/1‑101 (MQ=255)
cTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGa < 1:663938/101‑1 (MQ=255)
cTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGa > 1:2568985/1‑101 (MQ=255)
cTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGa > 2:464063/1‑101 (MQ=255)
cTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGa < 1:1677176/101‑1 (MQ=255)
cTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGa < 2:5848908/101‑1 (MQ=255)
ttGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGaa > 2:4434276/1‑101 (MQ=255)
tGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...g > 1:3387070/1‑101 (MQ=255)
tGAGATGCACAGATACCGCAGCCTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...g < 2:2056521/101‑1 (MQ=255)
gagaTGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...gg > 2:6044022/1‑101 (MQ=255)
gtGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...gggg..g < 2:5575516/100‑1 (MQ=255)
tGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...gggg..gg < 2:1299321/101‑1 (MQ=255)
gCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGc < 2:4842043/101‑1 (MQ=255)
gCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTGGAGGCAAGATGAA...GGGG..GGc > 1:4390792/1‑101 (MQ=255)
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCt < 2:6931060/101‑1 (MQ=255)
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCt > 1:5213294/1‑101 (MQ=255)
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCt > 2:84477/1‑101 (MQ=255)
acaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCtt < 2:5280813/101‑1 (MQ=255)
caGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCttt < 1:672067/101‑1 (MQ=255)
caGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCttt < 1:5867733/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTc < 1:4127248/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTc < 1:38456/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTc > 2:6791554/1‑101 (MQ=255)
gATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCa > 1:1524407/1‑101 (MQ=255)
aTACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCag > 2:4180792/1‑100 (MQ=255)
aTACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCAt > 1:402652/1‑101 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAGGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCt > 2:3406726/1‑101 (MQ=255)
cGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTg < 1:4523314/101‑1 (MQ=255)
aGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCg < 2:456697/101‑1 (MQ=255)
aGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCg > 1:2310053/1‑101 (MQ=255)
gCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGa > 1:6156798/1‑101 (MQ=255)
cgtGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaa < 2:735009/99‑1 (MQ=255)
tGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaaaa > 2:1649286/1‑101 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAat > 1:4807769/1‑101 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAat < 1:926334/101‑1 (MQ=255)
ggCACCCGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGCAAata < 2:3521455/101‑1 (MQ=255)
ccGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCg < 2:1202602/101‑1 (MQ=255)
ccGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCg < 2:1173185/101‑1 (MQ=255)
cGGGGCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCgg < 1:6911051/101‑1 (MQ=255)
ggggCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCggg > 2:2198174/1‑101 (MQ=255)
ggCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATAGTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCggggg > 1:4204837/1‑101 (MQ=255)
gCAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCgggggg < 2:1056906/101‑1 (MQ=255)
cAAGAAGGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCggggggg > 2:641707/1‑100 (MQ=255)
agaagGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGa > 2:2681487/1‑101 (MQ=255)
gaagGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGaa > 1:547608/1‑101 (MQ=255)
gagGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAAt < 1:641727/100‑1 (MQ=255)
aagGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAAt > 2:4112686/1‑101 (MQ=255)
aagGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAAt < 2:1537081/101‑1 (MQ=255)
agGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCACGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGCGAATg > 2:6160690/1‑101 (MQ=38)
agGGGGCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATg > 2:5702431/1‑101 (MQ=255)
ggggCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGgc > 2:17517/1‑101 (MQ=255)
ggggCTCTG.CCCACGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGgc < 1:7070490/101‑1 (MQ=255)
gggCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGgcg > 2:293063/1‑101 (MQ=255)
tctgcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...Gc < 2:1131284/96‑1 (MQ=255)
ctgg.CCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...Gcc > 1:5598807/4‑101 (MQ=255)
ctgcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...Gcc > 1:3296881/5‑101 (MQ=255)
tgcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCa < 1:5088714/98‑1 (MQ=255)
gaccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCag > 2:2783494/3‑101 (MQ=255)
cccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCaga < 1:5260297/100‑1 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAggggg < 1:1855755/101‑1 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAggggg > 2:3222722/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAggggg < 1:3627731/101‑1 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAgggggg > 1:6248853/1‑101 (MQ=255)
cgcgtGCCGAGATT.GCCCCGGGATATTTGAGTGAAGATGAC...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGc < 2:1373054/99‑1 (MQ=25)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGc < 1:1153704/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGc < 1:3041851/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGc > 1:2832057/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCa > 2:5024477/1‑101 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAg > 1:603282/1‑101 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAgc > 1:1394377/1‑101 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAgc > 1:2098610/1‑101 (MQ=255)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAA...GCCAGAGGGGGGc > 1:1071622/6‑101 (MQ=18)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAgcg.c > 1:346240/1‑101 (MQ=255)
gcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAA...GCCAGAGGGGGGCAgc < 1:3722323/99‑1 (MQ=18)
gggGCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCG.cccc < 2:2636775/101‑1 (MQ=255)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCG.ccccc < 1:2951426/101‑1 (MQ=255)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCG.ccccc < 1:1228434/101‑1 (MQ=255)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCTAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCG.cccccc < 2:5441827/101‑2 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCG.cccccctt < 1:2198269/101‑4 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCG.cccccctt < 2:6863426/101‑4 (MQ=255)
t.CCCCCGGGATATCTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCG.ccccccttc < 2:4337424/101‑5 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCG.ccccccttcg < 1:2021198/101‑6 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCGCCCCCCTTcgc < 2:3106532/101‑1 (MQ=255)
ccGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CCCCCtgcc < 1:3095373/101‑4 (MQ=0)
ccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCGCCCCCCTTCgcgg < 1:3788549/101‑1 (MQ=255)
cGGGATNNGGGAGGNANNNGGAN...GGGN..NNNNGTCATCTTGCCGAAAAGAGCCCGGGGGGGGAATGGCGCA...GCCAGAGGGGGGCAGCGCCCCCCTTCgcggg < 1:4935326/101‑1 (MQ=16)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATAGCGCA...GCCAGAGGGGGGCAGCGCCCCCCTTCgcgggc > 2:2394347/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCCGCGCCCCCCTTCgcgggcg > 2:3008515/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCGCCCCCCTTCgcgggcg > 2:191590/1‑101 (MQ=255)
tttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCcgc > 2:375649/1‑101 (MQ=255)
tttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCcgc < 2:3958137/101‑1 (MQ=255)
ttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCcgcg < 2:6668292/101‑1 (MQ=255)
aGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGAcg > 2:5770225/1‑101 (MQ=255)
|
CATTGGTGTTCTTGAGATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTG.CCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCA...GCCAGAGGGGGGCAGCG.CCCCCTTCGCGGGCGGCCGCGACG > NC_014034/2249217‑2249415
Base quality scores:
ATCG
< 3 ≤
ATCG
< 23 ≤
ATCG
< 31 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|