| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,372 | G→C | 2.1% | intergenic (‑168/‑137) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,372 | 0 | G→C | 2.1% | 8.3 ‑0.3 ‑0.6 | 383 | intergenic (‑168/‑137) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (5/3): ref base (196/179): total (201/182) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.26e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.78e-01 | ||||||||||
Only 100 of 410 total aligned reads displayed.
GGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCG.C.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTG > NC_014034/2249273‑2249471
|
gggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgcg < 1:1009599/101‑1 (MQ=255)
gggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgcg > 2:293063/1‑101 (MQ=255)
gCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCa > 1:6641539/1‑101 (MQ=255)
tctgcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...Gc > 1:1436022/6‑101 (MQ=255)
gaccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCag > 2:2783494/3‑101 (MQ=255)
cccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCaga < 2:3161145/100‑1 (MQ=255)
cccgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAg.g > 2:3838024/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAg.gggg > 1:1163344/1‑101 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGc < 1:3350564/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAg < 2:6706884/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAg < 2:3073668/101‑1 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAgc > 2:1023740/1‑101 (MQ=255)
tGCCGGGACT.CCCCCGGGATATTTGAGGCAAGAGGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAgcg > 1:3719900/1‑101 (MQ=255)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA...GCCAGAG.GGGGGc > 1:1071622/6‑101 (MQ=18)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCG.c.ccc < 1:6323577/101‑1 (MQ=255)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCG.c.cccc > 1:3079255/1‑101 (MQ=255)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCTAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCG.c.ccccc < 2:5441827/101‑2 (MQ=255)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCG.c.ccccct < 1:5280347/101‑3 (MQ=255)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCG.c.ccccct < 2:68211/101‑3 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TTGCGCA...GCCAGAG.GGGGGCAGCG.c.ccccctt < 2:1314294/101‑4 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCG.c.ccccctt < 2:6863426/101‑4 (MQ=255)
t.CCCCCGGGATATCTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCG.c.cccccttc < 2:4337424/101‑5 (MQ=255)
cgcccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCG.c.ccccctt < 2:4144243/99‑4 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCG.c.cccccttcg < 2:2863072/101‑6 (MQ=255)
ccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCgcgg < 1:208961/101‑1 (MQ=255)
ccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCgcgg > 2:5860343/1‑101 (MQ=255)
cGGGATNNGGGAGGNANNNGGAN...GGGN..NNNNGTCATCTTGCCGAAAAGAGCCCGGGGGGGGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCgcggg < 1:4935326/101‑1 (MQ=16)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAG.GCCAAGA.GGGGGCAGCG.C.CCCCtgccc > 2:7123796/1‑97 (MQ=0)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAG.GCCAAGA.GGGGGCAGCG.C.CCCCtgccc > 1:2695792/1‑97 (MQ=0)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAA.TTGGCCAAAGGCCA.AGAGGGGGCAGCG.C.CCCCTTccc < 1:6832091/101‑3 (MQ=0)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCgcgggc > 2:1144534/1‑101 (MQ=255)
gggATATTTGAGCAAAGTTGAA...GGGG..GGCTTTAATCTTGCCGAAAAAATCCCGGGGGGGGAA.TGGGGCA...GCCAGAG.GGGGGCGGCGCC.CCCCTTCgcgggc > 2:3741255/1‑101 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCcg > 1:1625825/1‑101 (MQ=255)
tttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCcgc > 2:221725/1‑101 (MQ=255)
gAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGAc < 1:5047355/101‑1 (MQ=255)
aGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGAcg > 2:5770225/1‑101 (MQ=255)
aGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACgcgcgc < 1:4762198/101‑1 (MQ=255)
gaagAA...GGGG..GACTTTCATCTTGGCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGAcgcgcgac < 2:5350376/98‑3 (MQ=25)
gATGAA...GGGG..GTCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGcgcc < 2:4390570/101‑1 (MQ=255)
gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGGGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGcgcc > 1:715783/1‑101 (MQ=255)
aTGAA...GGGG..TGCGTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGcgccg < 2:1376315/101‑1 (MQ=25)
aTGAA...GGGG..GGCTTTCATCTCGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGagccg > 2:840316/1‑101 (MQ=37)
tGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGcgccgc < 1:2206746/101‑1 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCa > 1:2396561/1‑101 (MQ=255)
aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCG.CACCCCTTCGCGGGCGGTCGCCACGGGCGCCGCaa > 2:4028710/1‑101 (MQ=25)
gggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:3782101/101‑1 (MQ=255)
gggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACa > 1:4009044/1‑101 (MQ=255)
ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTc > 2:5093846/1‑101 (MQ=255)
ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTc < 2:2100716/101‑1 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 1:2949020/101‑1 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 1:6683171/1‑101 (MQ=255)
ttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGc > 1:5823355/1‑101 (MQ=255)
ttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGc > 2:1522249/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGGGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGACGTGcc > 2:6090815/1‑101 (MQ=37)
tCATCTTGCCGAAAATATCCCGGGGGGCGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCACCAGGTCGTGcc > 1:773936/1‑101 (MQ=37)
cATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc > 1:3615629/1‑101 (MQ=255)
cATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc > 1:6766337/1‑101 (MQ=255)
cATCGTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc < 2:2633081/101‑1 (MQ=255)
aTCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcccc < 1:6118507/101‑1 (MQ=255)
tCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt > 2:650504/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 1:429545/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt < 2:4807526/101‑1 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTGGCGGGCGGCCGCGACGCGCGCCGCAACAGTTGGTGCCCCttt > 1:5565268/1‑101 (MQ=25)
gcagAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGt < 1:4480838/98‑1 (MQ=255)
cGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa < 2:6273172/101‑1 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt > 1:1861232/1‑101 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt > 2:1590847/1‑101 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt > 1:1091367/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc > 1:3486627/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 1:1249388/101‑1 (MQ=255)
aaTATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt > 2:4712624/1‑101 (MQ=255)
atatCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTg > 1:1361896/1‑101 (MQ=255)
atatCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTg > 1:1550525/1‑101 (MQ=255)
atatCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTg > 2:1069444/1‑101 (MQ=255)
atCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGTGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc < 1:3406850/101‑1 (MQ=255)
atCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc > 2:325359/1‑101 (MQ=255)
cccGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGc < 1:6168075/101‑1 (MQ=255)
cGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc > 1:5649607/1‑101 (MQ=255)
cGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc > 2:3499794/1‑101 (MQ=255)
cGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc < 1:3840380/101‑1 (MQ=255)
ggggggTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc > 2:2454631/1‑101 (MQ=255)
ggggggTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc > 1:6042181/1‑101 (MQ=255)
ggggggTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc > 2:1860484/1‑101 (MQ=255)
gggggTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc < 1:1947744/101‑1 (MQ=255)
ggggTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa < 1:464075/101‑1 (MQ=255)
gggTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 2:5639484/1‑101 (MQ=255)
gggTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt < 2:2349527/101‑1 (MQ=255)
gggTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt < 1:4387506/101‑1 (MQ=255)
ggTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg > 2:776699/1‑101 (MQ=255)
tGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc < 1:2925490/101‑1 (MQ=255)
tGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc > 1:3206156/1‑101 (MQ=255)
tGAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGGCGCACCCATGTc < 1:5126367/101‑1 (MQ=255)
tGAA.TGCCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc < 1:2804260/101‑1 (MQ=255)
gAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 2:6197319/1‑101 (MQ=255)
gAA.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 2:5974579/1‑101 (MQ=255)
aa.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:17518/101‑1 (MQ=255)
aa.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:2149551/101‑1 (MQ=255)
aa.TGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTGCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 2:3932233/101‑1 (MQ=255)
tGGCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 2:1990331/101‑1 (MQ=255)
ggCGCA...GCCAGAG.GGGGGCAGCGCC.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg > 2:5485932/1‑101 (MQ=255)
|
GGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA...GCCAGAG.GGGGGCAGCG.C.CCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTG > NC_014034/2249273‑2249471
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|