| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,380 | A→G | 1.8% | intergenic (‑176/‑129) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,380 | 0 | A→G | 1.8% | 5.5 ‑0.8 ‑0.7 | 380 | intergenic (‑176/‑129) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (5/2): ref base (194/178): total (200/180) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.53e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.23e-01 | ||||||||||
Only 100 of 407 total aligned reads displayed.
CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.C.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATC > NC_014034/2249281‑2249479
|
ccgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggg < 1:1987405/101‑1 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg < 1:3627731/101‑1 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 2:3222722/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 2:4114806/101‑1 (MQ=255)
cgcgtGCCGAGATT.GCCCCGGGATATTTGAGTGAAGATGAC...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 2:1373054/99‑1 (MQ=25)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc > 2:5818469/1‑101 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg > 1:603282/1‑101 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 1:1649347/101‑1 (MQ=255)
caagcggACTCCCCCCGGGATATTTGGAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggggga > 1:4752660/6‑100 (MQ=18)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGc < 2:6828971/96‑1 (MQ=18)
tccGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAgcg.c < 2:1031953/100‑1 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.c.ccc < 1:6323577/101‑1 (MQ=255)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.c.cccc > 2:6246519/1‑101 (MQ=255)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.c.cccc > 2:1249176/1‑101 (MQ=255)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.c.cccc > 1:3079255/1‑101 (MQ=255)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.c.ccccct < 1:5280347/101‑3 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.c.ccccctt < 1:2198269/101‑4 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.c.cccccttc < 1:6739474/101‑5 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.c.cccccttcg < 2:2863072/101‑6 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.c.cccccttcg > 2:3151444/1‑96 (MQ=255)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.C.CCCC.tgccc > 1:1102536/1‑97 (MQ=0)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.C.CCCC.tgccc > 2:7123796/1‑97 (MQ=0)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCgcgggc > 2:1144534/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCgcgggcg > 2:191590/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGggcggc > 1:6078253/1‑101 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCcg > 1:3734564/1‑101 (MQ=255)
aGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGAcg > 2:1500299/1‑101 (MQ=255)
gCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGAcgcg > 1:5636751/1‑101 (MQ=255)
aaGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGAcgcgcg > 2:3921484/1‑101 (MQ=255)
aGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACgcgcgc > 1:6603896/1‑101 (MQ=255)
gaagAA...GGGG..GACTTTCATCTTGGCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGAcgcgcgac < 2:5350376/98‑3 (MQ=25)
gATGGA...GGGG..GGCTTTCATCTTGCCGAAAATTTGCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGcgcc < 1:1593521/101‑1 (MQ=37)
gATGAA...GGGG..GTCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGcgcc < 2:4390570/101‑1 (MQ=255)
gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGcgcc < 1:6791908/101‑1 (MQ=255)
gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGcgcc > 2:6157799/1‑101 (MQ=255)
gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGcgcc < 2:552067/101‑1 (MQ=255)
aTGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGTAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGcgccg < 2:6910577/101‑1 (MQ=255)
aTGAA...GGGG..GGCTTTCATCTCGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGagccg > 2:840316/1‑101 (MQ=37)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:2063484/101‑1 (MQ=255)
aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.CTCGCGGGCGGCCGCGCCGCGGGCCGCaa > 2:4330687/1‑101 (MQ=25)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 2:6629257/1‑101 (MQ=255)
gg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAgg > 2:3082247/1‑101 (MQ=255)
gg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.C.CCCCATTCGCGGGCGGCCGCGACGCGCGCCGCAACAgg < 1:5007893/101‑1 (MQ=255)
g..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGt > 1:3438974/1‑101 (MQ=255)
g..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGt < 2:5049094/101‑1 (MQ=255)
cTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGt > 1:4157106/1‑101 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 2:5654839/1‑101 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 2:2770006/101‑1 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 1:2949020/101‑1 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 2:2436999/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc < 2:5934343/101‑1 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 2:2562612/1‑101 (MQ=255)
cATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc > 1:720349/1‑101 (MQ=255)
cATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc > 1:395411/1‑101 (MQ=255)
aTCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcccc < 1:1185207/101‑1 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 1:2357460/1‑101 (MQ=255)
cTTACCGAAGTTATGCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt < 1:2783596/101‑1 (MQ=37)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTGGCGGGCGGCCGCGACGCGCGCCGCAACAGTTGGTGCCCCttt > 1:5565268/1‑101 (MQ=25)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 1:3351043/101‑1 (MQ=255)
ccGAAAATATCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 2:3814525/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 2:402648/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 2:3719750/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 1:859924/101‑1 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt > 1:1861232/1‑101 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt > 2:1590847/1‑101 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt < 2:300402/101‑1 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt < 2:6022966/101‑1 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 1:1249388/101‑1 (MQ=255)
aaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt > 1:3570184/1‑101 (MQ=255)
atatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTg > 1:1361896/1‑101 (MQ=255)
atgccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc < 2:2309958/98‑1 (MQ=255)
cccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGc < 1:6168075/101‑1 (MQ=255)
cGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc > 2:3499794/1‑101 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc > 2:6345672/1‑101 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc > 1:6682385/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc < 1:5818771/101‑1 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc < 1:4870052/101‑1 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 1:1764263/1‑101 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa > 1:2690359/1‑101 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa < 2:2193081/101‑1 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt < 1:4387506/101‑1 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg > 2:776699/1‑101 (MQ=255)
tGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc > 1:3206156/1‑101 (MQ=255)
tGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc < 1:2925490/101‑1 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 1:1085864/1‑101 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa < 1:1023775/101‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGGCGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt > 2:4625112/1‑101 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:2149551/101‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:3821049/101‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt > 1:4467815/1‑101 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa > 2:479309/1‑101 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa > 2:6724162/1‑101 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 1:5112721/101‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 1:6966959/101‑1 (MQ=255)
gcA..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTg > 1:4576935/1‑101 (MQ=255)
a..GCCAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGc < 2:1980247/101‑1 (MQ=255)
gctagagGGGGGCAGCG.CGCCCC.TACGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGcc < 2:1790403/98‑1 (MQ=255)
ccAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCNTTCTGTCGCACCCATGTCATAAGCTGGCCg > 1:1467791/1‑101 (MQ=255)
cAGAGGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGc > 2:5443691/1‑101 (MQ=255)
agGGGGGCAGCGCC.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATc < 1:2092121/101‑1 (MQ=255)
|
CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.C.CCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATC > NC_014034/2249281‑2249479
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|