Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 2,494,003 | A→G | 4.0% | intergenic (+51/‑191) | RCAP_rcc02319 → / → RCAP_rcc02320 | hypothetical protein/hypothetical protein |
Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 2,494,003 | 0 | A→G | 4.0% | 18.9 ‑1.0 ‑0.0 | 298 | intergenic (+51/‑191) | RCAP_rcc02319/RCAP_rcc02320 | hypothetical protein/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (6/6): ref base (105/181): total (111/187) | ||||||||||
Fisher's exact test strand distribution p-value = 3.73e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.71e-01 |
Only 100 of 318 total aligned reads displayed.
GCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.A.GGGG.GGGCGCTG.CCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.AGCAGAAGGGGGGCAAGCG.CCCCCTGCCCCGGCGGTCCGT > NC_014034/2493904‑2494101
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gcgTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgca < 1:7127116/101‑1 (MQ=25)
cTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCaa < 1:5399307/101‑1 (MQ=25)
cTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCaa < 2:4498781/101‑1 (MQ=25)
tGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAg < 2:1348650/101‑1 (MQ=21)
ggCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGa > 1:4125887/1‑101 (MQ=21)
cccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATg < 2:2959531/101‑1 (MQ=21)
cccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATg < 1:6930124/101‑1 (MQ=21)
ccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGa > 1:1978802/1‑101 (MQ=21)
cAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaa < 2:525570/101‑1 (MQ=21)
aGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCCAGATGaaa > 1:4687584/1‑101 (MQ=21)
aGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaaa < 1:3984449/101‑1 (MQ=21)
aGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaaa < 2:6685182/101‑1 (MQ=21)
gcgcCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAc < 2:6926121/101‑1 (MQ=21)
gccgcGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCg < 1:6574276/101‑1 (MQ=21)
ccgcGGCGGGCGCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCgg < 1:3066748/101‑1 (MQ=21)
gcggcgGGCGCGCGGCACGACAGGCCGGGGAA.A.GGGG.GGGGGCTG.CCCCCCGTCCGGCAGCGGGCTCCCCCCCGGCAATTTGCCGCACAAAGAAACCGGaa > 1:1170684/1‑100 (MQ=255)
gcgggcgCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGcc < 2:1668214/101‑1 (MQ=21)
cgggcgCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCt < 1:3704793/101‑1 (MQ=21)
gggcgCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGGGCCGCCCCCCGGCCCGCAAGCGGCCTCCCCCCGGGAAATTTGCGCAAAGAGAAAACCGGAGGCCt > 2:5345353/1‑101 (MQ=255)
gggcgCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCtt < 1:3236547/101‑1 (MQ=21)
gggccCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCtt < 2:6566675/101‑1 (MQ=18)
ggcgCGCGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCttt > 1:5868744/1‑101 (MQ=21)
gcgcgcGGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTc < 2:1128414/101‑1 (MQ=21)
gcgggGCCCGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCAt < 1:6050482/101‑1 (MQ=18)
gcgcgGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCAt < 1:5963658/101‑1 (MQ=21)
gcgcgGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCAt < 1:4183156/101‑1 (MQ=21)
cgcgGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATc < 1:4354939/101‑1 (MQ=21)
cgGCACGACAGGCC.GAGTA.AGGGGG.GGGCGGTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAACCGATGCATTTCAttct > 2:3292121/1‑98 (MQ=17)
cgGCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCCTCCGCAAGCGGACTCCCCCCGGGATATTTTCAGCAAGATGAAACCCGATGCCTTTCATCtt > 1:2441510/1‑101 (MQ=18)
ggCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTg > 1:5687611/1‑101 (MQ=21)
ggCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTg < 1:5481342/101‑1 (MQ=21)
ggCACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTg > 1:1639647/1‑101 (MQ=21)
gcatggcAGGCC.GAGTACG.GGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGc < 2:5662156/95‑1 (MQ=17)
cACGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGcc < 2:6470756/101‑1 (MQ=21)
cGACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCg < 1:1883130/101‑1 (MQ=21)
gACAGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGa > 1:967734/1‑101 (MQ=21)
aGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAat < 1:2055620/101‑1 (MQ=21)
aGGCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAat > 1:316536/1‑101 (MQ=21)
ggCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata < 2:2710869/101‑1 (MQ=21)
ggCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata < 2:3722321/101‑1 (MQ=21)
gCC.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAatat < 1:4924078/101‑1 (MQ=21)
cc.GATTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATc < 2:40144/101‑1 (MQ=18)
cc.GAGTA.A.GGGGTGAGCGCTG.CCCCCCGTCCGCAAGCGTACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATc < 2:2836554/101‑1 (MQ=21)
c.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc > 1:1753761/1‑101 (MQ=18)
c.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc < 2:1032815/101‑1 (MQ=18)
c.GAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc < 2:4457073/101‑1 (MQ=21)
gAGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATccc < 1:6109914/101‑1 (MQ=18)
aGTA.AGGGGG.GGGCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCg < 1:1425872/101‑1 (MQ=18)
gtaaggggg.gggCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgg > 2:5005216/6‑101 (MQ=255)
gtaaggggg.gggCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgg > 1:5311442/6‑101 (MQ=255)
taaggggg.gggCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATCTTTGCAGCAAGATGAAACCGGATGCCCTTCATCTTGCCCTAAATATCCCggg > 1:2370275/5‑101 (MQ=18)
gaaggggg.gggCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggg < 2:45779/97‑1 (MQ=255)
aggggg.gggCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggg > 2:202817/3‑101 (MQ=255)
ggggg.gggCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgggggg > 2:5504117/2‑101 (MQ=255)
ggggg.gggCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgggggg > 2:1828193/2‑101 (MQ=255)
ggg.gggCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgggggggg > 1:3456816/1‑99 (MQ=255)
ggg.gggCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgggggggg > 2:6196447/1‑99 (MQ=255)
gg.gggCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGa < 1:914235/101‑1 (MQ=255)
gg.gggCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGa > 2:4706240/1‑101 (MQ=255)
gg.gggCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGa > 1:6687036/1‑101 (MQ=255)
gggCGCTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.t > 1:503492/1‑101 (MQ=255)
gcgcTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.Tgg < 2:6960075/101‑1 (MQ=255)
gcgcTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.Tgg < 1:6946460/101‑1 (MQ=255)
cgcTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGc > 2:1581032/1‑101 (MQ=255)
cgcTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGc < 1:3334951/101‑1 (MQ=255)
gcTG.CCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..g < 2:2157931/101‑1 (MQ=255)
ctccccccCGTCCGCAAGCCGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.a < 1:848607/98‑1 (MQ=18)
ccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGAAAGATGAAACCGGATGCCTTTCATCTTGCCCGAGATATCCCGGGGGGTGAA.TGGC..ggacgca > 2:1215755/1‑95 (MQ=18)
cccgtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagccag < 2:6425092/97‑7 (MQ=255)
ccgtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagccaga < 2:80028/98‑8 (MQ=255)
aaGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCa > 2:3446682/1‑101 (MQ=18)
aaGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCa < 1:4841224/101‑1 (MQ=18)
gCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCagc < 1:3524300/101‑3 (MQ=18)
cGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCagcg > 2:3608282/1‑98 (MQ=18)
cGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCagcg > 1:381771/1‑98 (MQ=18)
cGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCagcg > 2:4103598/1‑98 (MQ=18)
ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCagcgc > 2:7107447/1‑97 (MQ=18)
ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAACATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCagcgc > 1:6144098/1‑97 (MQ=18)
gACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cc > 2:30725/1‑101 (MQ=18)
cTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCaccgcccc > 2:5968552/1‑94 (MQ=18)
ccccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cccccc > 1:222273/1‑100 (MQ=17)
ccccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGG.AGGCG.cccccc > 2:2902251/1‑100 (MQ=17)
cccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cccccct < 2:4196590/101‑3 (MQ=17)
cccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cccccca < 2:5732257/101‑3 (MQ=17)
cccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cccccctgc < 2:4881664/101‑5 (MQ=17)
cGGGAAATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCAGCGG.CCCCCTGccc > 2:3513234/1‑101 (MQ=18)
gggATATTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAA.AGGCCAAGAGGGGGCAGCG.CCCCCTGcccc > 1:6228942/1‑101 (MQ=0)
gggATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGcccc > 1:6612003/1‑101 (MQ=17)
gggATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGcccc < 2:1733916/101‑1 (MQ=17)
ggATATTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAA.AGGCCAAGAGGGGGCAGCG.CCCCCTGCCCcg > 1:2857575/1‑101 (MQ=2)
ggATATTTGCAGCAAGATGAAACAGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cccccctgccacg > 1:3366503/1‑93 (MQ=14)
gATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGCCCcgg > 2:4306352/1‑101 (MQ=18)
tatTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAA.AGGCCAAGAGGGGGCAGCG.CCCCCTGCCCcgccg > 1:2739692/1‑101 (MQ=2)
tatTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGCCCcggcg > 2:2512571/1‑101 (MQ=17)
tatTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGCCCcgccg > 2:3164905/1‑101 (MQ=17)
atTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGCGGGCAGCCC.CCCCCTGCCCcggcgg > 2:6129407/1‑101 (MQ=18)
tttGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGCCCcggcggc > 1:1611925/1‑100 (MQ=17)
ttGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGCCCCGGCGGTc > 1:3639477/1‑101 (MQ=17)
tGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGCCCCGGCGGTcc < 1:707982/101‑1 (MQ=17)
cagcaAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.AAGCCAGGGGGGGGCAGCGCCCCCCTGCCCCGGCGGTCCGt < 1:1021714/101‑1 (MQ=18)
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GCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTA.A.GGGG.GGGCGCTG.CCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.AGCAGAAGGGGGGCAAGCG.CCCCCTGCCCCGGCGGTCCGT > NC_014034/2493904‑2494101
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|