| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,740,181 | G→T | 7.4% | G453C (GGC→TGC) | RCAP_rcc02544 → | ABC transporter substrate‑binding protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,740,181 | 0 | G→T | 7.4% | 2.3 ‑2.9 ‑0.0 | 65 | G453C (GGC→TGC) | RCAP_rcc02544 | ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): new base (5/0): ref base (28/32): total (33/32) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.31e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.97e-01 | ||||||||||
Only 100 of 230 total aligned reads displayed.
GCTCGATGCCCGTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTGTTGCTGATCGTC > NC_014034/2740081‑2740281
|
gcTCGATGCCCGTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGCCCGGCTT.g > 1:412336/1‑101 (MQ=255)
tCGATGCCCGTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.c < 1:6626893/101‑1 (MQ=255)
tCGATGCCCGTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.c < 2:1616491/101‑1 (MQ=255)
cGATGCCCGTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.cc < 1:1976550/101‑1 (MQ=255)
cGATGCCCGTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCCT.gggc > 1:3613025/1‑99 (MQ=255)
gATGCCCGTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGGGACCGACTGGGACCGGATCAACGACCGGCTT.GG.Gc.g > 1:4007008/1‑101 (MQ=255)
gATGCCCGTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.gggcc > 2:896686/1‑98 (MQ=255)
aTGCCCGTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.TG.Tc.gc > 1:3739057/1‑101 (MQ=255)
ccGTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCg.cca < 1:5506479/101‑1 (MQ=255)
ccGTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCg.cca < 2:86362/101‑1 (MQ=255)
ccGTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCCT.TG.CC.GCg.cca > 2:4800653/1‑101 (MQ=255)
gTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCg.ccagc < 2:3523219/101‑1 (MQ=255)
tCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.TG.TC.GCc.ccgcgc > 2:4587490/1‑97 (MQ=255)
tCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCg.ccagcc < 2:1366266/101‑1 (MQ=255)
cTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCg.ccagcca < 2:213442/101‑1 (MQ=255)
cTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCg.ccagcca < 1:3219907/101‑1 (MQ=255)
cTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCg.ccagcca < 1:6009190/101‑1 (MQ=255)
ttGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.TG.CC.CCg.cccgccac > 1:1294588/1‑100 (MQ=255)
ttGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.ccagccag < 2:5925375/101‑1 (MQ=255)
ggCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCAGCCAgcg < 2:4387753/101‑1 (MQ=255)
cGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCAGCCAGcgccg < 2:5221275/101‑1 (MQ=255)
ggTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGTCTT.GG.CC.GCG.CCAGCCAGCgccgcc > 1:5862582/1‑101 (MQ=255)
ggTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCCGCCAGGgccgcc > 1:2379291/1‑101 (MQ=255)
ggTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCAGCCAGCgccgcc < 2:2010615/101‑1 (MQ=255)
gTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.TG.CCGGCG.CC.GCCCCCgccgccc > 1:1000467/1‑100 (MQ=255)
gCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.TG.GC.GCG.CCCGCCCCCgcccccccc > 1:1868213/1‑98 (MQ=255)
ctctCGGGCGAGATCTCCCCGGGGTGGGCTCGGGCGGCGGCGGGGACCGCCGGGGACCGAATCCCCGACCGCCTT.GG.CC.TCG.CCAGCCAGCGCCGCCACTa < 2:6248997/101‑1 (MQ=255)
ctctCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.TT.GC.GCG.CCCGCCCGCgccgccccca > 1:1683774/1‑97 (MQ=255)
tctcGGGCGTGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.TG.GC.GCG.CCCGCCCGCgcccccccccc > 1:655867/1‑96 (MQ=255)
tctcGGGCGAGATCCCCCCCGAGGCGGCTCTGGCGGCGGCGGCGCCCGACTGGGACCGGATCCCCGCCCGGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTAc < 1:4628460/101‑1 (MQ=255)
tctcGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCAGCCCGCGCCGCCCCTAc > 1:6257231/1‑101 (MQ=255)
tccggggCGAGACCCCCCCCGGGGCGGCTCGGGCGGCGGCGGCGCCCGACTGGGCCCGGACCCCCGACGGGTTG.GC.CC.GCG.CCAGCCAGCGCCGCCACTAc < 2:464762/97‑1 (MQ=255)
ctcGGGCGAGATCCCCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACGGGGACCGGATCCCCGCCCGGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTAcc < 1:6741165/101‑1 (MQ=255)
ctcGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCAGCCAGCGGCGCCCCTAcc > 2:6427458/1‑101 (MQ=255)
tcGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.TG.TC.GCG.CCCGCCAGCGCCCCCCCCAccc > 2:3417422/1‑100 (MQ=255)
cGAGATCCCCCCCGCGGCGGCTGTGGCAGGGCCGGCGACCGACTGGGACCGGATCACCGCCCGGTTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAgg < 1:2951763/101‑1 (MQ=255)
gagaTCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.TG.CC.GCG.GCCGGCCGCGGCGCCCCCAccccccggc > 2:3997843/1‑94 (MQ=255)
agaTCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCCGCCCGCGCGCCCCCCACCCCGAGGCg > 2:3058829/1‑101 (MQ=255)
agaTCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCCGCCCGCGCCGCCCCCAccccccggcc > 1:5786817/1‑93 (MQ=255)
ccccccGGGGCGGCTCGGGCGGCGGCGGCGCCCGACTGGGCCCGGATCCCCGACCGGCTT.GG.CC.GCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATggg < 1:1210132/100‑1 (MQ=255)
aCCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCCCTACCCCGAGGCGGTggg > 1:456231/1‑101 (MQ=255)
ccgggggcggcTCTGGGGGGGGCGGCGCCCGACGGGGACCGGATCCCCGCCCGGCTT.GG.CC.GCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCt < 1:713572/96‑1 (MQ=255)
ccGGGGCGGCTCTGGCGGGGGCGGCGCCCGACGGGGACCGGACCCCCGCCCGCCTG.GG.CC.GCG.CCTGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTg < 1:6409633/101‑1 (MQ=255)
gAGGAGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.TG.GC.GCG.CCCGCCCGCGCCGCCCCCACCCCCAGGCGGCGGGGCGggg > 2:5186157/1‑100 (MQ=255)
gggcggcTCGGGGGGCGGCGGCGACCGACGGGGCCCGGACCCCCGCCCGGCTG.GG.CC.GCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAg < 1:5642547/100‑1 (MQ=255)
gcggcTCGGGGGGCGGGGGCGACCGACTGGGACCGGACCACCGCCCGGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAggc < 1:3827842/101‑1 (MQ=255)
ggcTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.TG.CC.GCG.CCCGCCAGCGCCGCCACCACCCCGCGGCGGCGGGGGTGGGggcgg > 2:966128/1‑101 (MQ=255)
ccgcgggcggcggcggcGCCCAGCGGGGCCCGGTCCACCGACCGGCTG.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAggcggc < 2:5372701/96‑1 (MQ=255)
tgggcggcggggccGCCCGCCGGGGACGGTACCCCCGCCCGGCTG.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGcc < 2:2256825/99‑1 (MQ=255)
ctGGCGGGGGCGGCGACCGACGGGGCCCGGATCCCCGCCCGGCTG.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGcc < 2:192708/101‑1 (MQ=255)
ctGGCGGCGGCGGCGCCCGACGGGGCCGGGACCCCCGCCCGGTTT.GG.CC.GCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGcc < 2:3122513/101‑1 (MQ=255)
ctGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.TG.GC.GCG.CCCGCCAGCGCCGCCCCCACCCCGAGGCGGTGGGGGTGGGGGGGGGGcc > 1:7120698/1‑101 (MQ=255)
ctGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCC.CCAGCCCGCGCCGCCACCACACCCGGGCGAGGGGGGGGGGggcgggggc > 1:5712026/1‑97 (MQ=255)
tGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCa > 1:2461746/1‑101 (MQ=255)
gggcggcggcggcGCCCGACGGGGCCGGGACCCCCGCCCGGCTG.GC.CC.GCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCa < 2:3860695/100‑1 (MQ=255)
ggcggcggcggcGCCCGCCGGGGCCCGGACCCCCGCCCGGCTG.GC.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCAt < 2:7126965/101‑1 (MQ=255)
gggccggcggcgACGGCTTGGGCCGGGATCCCCGCCCGGTTG.GG.CC.CCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATg < 2:5360984/97‑1 (MQ=255)
ggcggcgCCGGCCGGGGCCCGGACCCCCGCCCGGCTT.GC.CC.GCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCt < 1:2678845/101‑1 (MQ=255)
gggcgCCCGCCGGGGCCCGGACCCCCG.CCGGGTT.GGCCC.CCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCtgt < 1:4800896/100‑1 (MQ=255)
ggcgCCCGACGGGGCCGGGACCCCCGCCGGGCTT.GC.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCtgtg < 2:4419721/101‑1 (MQ=255)
ggcgACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCtgtg > 2:3673031/1‑101 (MQ=255)
gcgACCGACTGGGACCGGATCACCGACCGGCTT.TG.CC.GCG.CCCGCCAGGGCCGCCCCCACCCCGAGGCGGTGGGGCTGGGGGGGGCGCCCCGAGCCCGTgg > 1:2505472/1‑101 (MQ=255)
cgcccgcgtGGGCCGGGACCCCCGCCCGGCTG.GC.CC.CCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGgc < 2:4563738/93‑1 (MQ=255)
cgcccgacGGGGCCGGGACCCCCGCCCGCTTG.GG.CC.CCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGgc < 1:896710/98‑1 (MQ=255)
cacggagtGGGCCGGGATCCCCGCCGGGTTT.GC.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGgcg < 2:5070281/94‑1 (MQ=255)
accgacTGGGACCGGATCACCGACCGGCTT.TG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGGGAGGGGGCTGGGGGGGGGGGCCTGAGCCTGTGgcgc > 2:1201879/1‑101 (MQ=255)
accgacTGGGACCGGATCACCGACCGGCTT.TG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGGTGGGGGGGGCGCCACGGGGCCGTGgcgc > 2:2378430/1‑101 (MQ=255)
gacTGGGACCGGATCACCGACCGGCTT.TG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGGTGGGGCTGGAGGCGGGGCCATGAGCCTGTGGGGGGGc > 2:2066676/1‑101 (MQ=255)
gacTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCCGCCAGCGCCGCCCCTACCGCGAGGCGATGGGGCTGGGGGGGGGGCCCCGAGCCCGTGGCGCGGc > 1:6916448/1‑101 (MQ=255)
gcggggACCGAACCACCGACCGCCTT.GG.CC.GCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCa < 2:3263562/98‑1 (MQ=255)
acTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCCCTACCCCGAGGGGATGGGGGTGGGGGGGGGGCCCTGAGCCCGTGGGGCGGCa > 1:2615507/1‑101 (MQ=255)
tGGGACCGGATCACCGACCGGCTT.GT.CC.GCG.CCCGCCCGCGCCGCCCCTACCGCCGGGCGGGGGGGGTGGGGGCGGCGCCATGAGGCCGTGGGGCGGGAtt > 1:529029/1‑101 (MQ=255)
gggACCGGATCACCGACCGGCTT.GG.CC.GCG.CCCGCCCGCGCCCCCACCACCCCGAGGCGATGGGGCTGGGGGGGGCGCCATGAGCCTGTGGGGCGGCAGTc > 2:6056453/1‑101 (MQ=255)
gggACCGGACCCCGGCCCGGTTG.GC.CC.GCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTc < 2:7086240/101‑1 (MQ=255)
ggcccGGACCCCCGCCCGGCTG.GC.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCa < 1:4418002/98‑1 (MQ=255)
ggACGGGATCCCCGCCGGGCTG.GC.CC.GCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCa < 1:6191345/101‑1 (MQ=255)
ggACCGGATCACCGACCGGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCGTTcg > 2:6444658/1‑100 (MQ=255)
gccggaacccccgcccgGCTG.GC.CC.GCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAg < 2:4892982/91‑1 (MQ=255)
cGGATCACCGACCGGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCACAACCGCGCGGCGATGGGGCTGGGGGGGGGGCCCTGAGCCTGTGGCGCGGCATTCAgggg > 2:3452086/1‑101 (MQ=255)
ggATCACCGACCGGCTT.TG.CC.GCG.CCAGCCCGCGCCGCCCCTACCGCGGGGCGATGGGGCTGGGGGGGGGGCCCTGAGCCTGGGGGGCGGGATTCAggggg > 2:4069014/1‑100 (MQ=255)
ggACCACCGCCCGGCTG.GG.CC.GCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGggc < 2:1294540/101‑1 (MQ=255)
tCACCGGGCGGGTTGGG.CC.GCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGggcgg < 1:4222673/101‑1 (MQ=255)
ccccgcccgGCTG.GG.CC.GCG.CCGGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCt < 2:4447952/99‑1 (MQ=255)
cACCGACCGGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCCGTGGCGCGGCCTTCAGGGGCGGCt > 1:1177188/1‑101 (MQ=255)
ccgggccgGCTG.GG.CC.CCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTg < 1:6851715/96‑1 (MQ=255)
accgaccgGCTT.GG.CC.CCG.GCCGCCACCGCCGCCCCATCCTCGAGGCGGTGGGGGTGGCGGGGGGGCCACGAGGCCTTGGGGCGGCCTTCAGCggcggccg > 2:6581359/1‑99 (MQ=255)
cgcccgGCTG.GC.CC.GCC.CCAGCCGGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTGtt < 2:5472107/98‑1 (MQ=255)
cgaccgGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGGGGCCGtt > 1:6150216/1‑101 (MQ=255)
gacgGCTT.TG.CC.GAGCCCGGCCGGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTGTTg < 2:447515/99‑1 (MQ=255)
ccgGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCCCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTGTTGCt > 1:5364693/1‑101 (MQ=255)
ggCTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTGTTGCTGa > 2:6870658/1‑101 (MQ=255)
ggCTG.GC.CC.GCC.CCACCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTGTTGCTGa < 1:4882853/101‑1 (MQ=255)
cTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTGTTGCTGAtc > 2:1790389/1‑101 (MQ=255)
cTT.GC.CC.GCC.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTGTTGCTGAtc < 2:2556894/101‑1 (MQ=255)
tt.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTGTTGCTGAtcg > 2:5724106/1‑101 (MQ=255)
tt.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTCGCGCGGCATTCAGGGGCGGCTGTTGCTGAtcg > 2:5251765/1‑101 (MQ=255)
t.GG.CC.GCG.CCAGGCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTGTTGCTGAtcgt > 1:5054754/1‑101 (MQ=255)
t.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATCAGCCTGTGGCGCGGCATTCAGGGGCGGCTGTTGCTGAtcgt > 1:5518318/1‑101 (MQ=255)
gg.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTGTTGCTGAtcgtc > 2:2831343/1‑101 (MQ=255)
gg.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTGTTGCTGAtcgtc > 2:1074647/1‑101 (MQ=255)
|
GCTCGATGCCCGTCTTGGCCGGGTGCTCTCGGGCGAGATCACCCCCGAGGCGGCTCTGGCGGCGGCGGCGACCGACTGGGACCGGATCACCGACCGGCTT.GG.CC.GCG.CCAGCCAGCGCCGCCACTACCGCGAGGCGATGGGGCTGGAGGCGGCGCCATGAGCCTGTGGCGCGGCATTCAGGGGCGGCTGTTGCTGATCGTC > NC_014034/2740081‑2740281
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|