| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,037,952 | G→A | 2.7% | intergenic (+147/+88) | torR → / ← dorS | TorCAD operon transcriptional regulatory protein TorR/DMSO/TMAO‑sensor hybrid histidine kinase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,037,952 | 0 | G→A | 2.7% | 7.7 ‑2.4 ‑0.2 | 219 | intergenic (+147/+88) | torR/dorS | TorCAD operon transcriptional regulatory protein TorR/DMSO/TMAO‑sensor hybrid histidine kinase |
| Reads supporting (aligned to +/- strand): new base (0/6): ref base (79/134): total (79/140) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.96e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.21e-01 | ||||||||||
Only 100 of 256 total aligned reads displayed.
CCGTGACCGCCGGGGGCCCA.AAG.G..CCCTC.GG.CC.TG.CG.CCCGCCCCGCCAT.CGGCGGGCGCATTCGCGCCG.CCGGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCAGCCCGCGATT > NC_014034/3037857‑3038052
|
cggggcccgggggggCCCA.AGC.G..CCCCC.CG.CC.CGCCC.CCCCCCCCCCCCG.GGGGGGGCCCATTCCCGCCG.CGGGGGGGGGGCGCAGGCCTCTGT.CGTGC.tt < 1:3167732/91‑1 (MQ=2)
ccggccccgcgGGGGCCCA.AAGCC..CCCGC.GG.CC.GG.CC.CCCCCCCCGCCAT.GGGCGGGCGCATTCGCGCGG.CGGGGGGGGGGCGCAGGCCTCTGT.CGTGC.tt < 2:2588040/92‑1 (MQ=9)
ccccccccgcgGGGGCCAA.AGG.GC.CCCGC.GC.CC.GC.CC.CCCGCCCCGCCCA.GGGCGGGCGCATTCGCGCCG.CCGGGGGTGGGCGCAGGCCTCTGT.CACGC.tt < 2:4100333/92‑1 (MQ=9)
gccgcgcgggggggCCCG.CGG.C..CCCTG.GC.CC.GG.CG.CCCGCCCCCCCCG.GGGGGGGCGCATTCGCGCCG.CGGGGGGTGGGCGCAGGCCTCTGT.CACGC.TTgc < 2:2773928/92‑2 (MQ=9)
gTGACCGCCGGGGGCCCA.AAG.G..CCCTC.GG.CC.TG.CG.CCCGCCCCGCCAT.CGGCGGGGGCATTCGCGCCC.CCCGGGCTGGGGGCAGGGCCCTGT.CGTggctgg > 2:2870292/1‑96 (MQ=17)
ccggacggcgGGGGCCCA.AGG.C..CCCCC.GGCCC.CC.CC.CCCCCCCCGCCCG.GGGCGGGCGCATGCGCGCCG.CGGGGGCGGGGCGCAGGCCTCTGT.CACGC.TTg < 2:2422478/93‑1 (MQ=2)
gggcccggcggggCCCA.AGG.G..CCCCC.GGCCC.CC.CC.CCCCCCCCGCCGT.GGGCGGGCGCATTCGCGCCG.CGGGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTgg < 1:4141022/92‑1 (MQ=9)
gACCGCCGGGGGCCCA.AAG.G..CCCTC.GG.CC.TG.CG.CCCGCCCCGCCAT.CGGCGGGGGGCTTCGCCCCG.CCCCGGGCGGGGGCGGGGCCCCCT.CGTGG.TTgggg > 2:4867699/1‑101 (MQ=2)
gggcccgGGGGCCCACAAG.GCCCCCGC.GG.CC.CC.CC.CCCCCCCCCCCGT.GGGGGGGCGCTTCCGCGCCG.CGGGGGGGGGGCGCAGGCCTCTGT.CGTGC.TTgg < 2:5565444/97‑1 (MQ=9)
ccgggggggCCCA.AGG.G..CCCGCGGG.CG.CC.CC.CCCGCCCCGCCGG.GGGGGGGCGCATCCGCGCCG.GGGGGGCGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGaa < 2:6974498/97‑1 (MQ=255)
cccgcggggCCCAGAGG.G..CCCCC.GC.CC.CGCCG.CCCCCCCCGCCGT.GGGGGGGCGCGTCCGCGCGG.CGGGGGGGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGa < 2:6090839/96‑1 (MQ=255)
ggggggCCCA.ACC.G..CCCCC.CG.CC.CC.CCCCCCCCCCCCCCGG.CGGGGGGCGCTTTCGCGCGG.CGGGGGGGGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACg < 1:4794598/100‑1 (MQ=9)
cgGGGGCCCA.AAG.G..CCCTC.GG.CC.TG.CG.CCCGCCCCGCCAT.CGGCGGGGGCATTCGCGCCG.CCCGGGGGGGGGGCGGGGCCCTGT.CCTGG.TTgggggggcgg > 1:3809883/1‑95 (MQ=11)
gggCCCA.AAG.G..CCCTC.GG.CC.TG.CG.CCCGCCCCGCCAT.CGGCGGGGGCCTTTCCGCCGCCCGGGGCGGGGGGC.GGCCCCCGT.CGGGG.TTGGGGGAAAggggt > 1:2620585/1‑98 (MQ=2)
ggCCCA.AGG.C..CCCCC.GG.CC.CGCCC.CCCCCCCCCCCAG.GGGCGGGCGCATTCGCGCCG.CCGGGGCGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCt < 2:2358447/101‑1 (MQ=9)
gCCCC.ACG.G..CCCCC.GG.CCGCG.CC.CCCCCCCCGCCGG.CGGGGGGCGCATTCGCGCCG.CGGGGGGGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCtt < 1:5217043/101‑1 (MQ=9)
gCCCA.AAG.G..CCCTC.GG.CC.TG.CG.CCCGCCCCGCCAT.CGGCGGGGGGGCTTGCGCCG.CCGGGGGCGGGGGCGGGGCTCCGTCCGTGC.TTtggggaggggcgtg > 2:267787/1‑91 (MQ=2)
cgccA.ACG.G..CCCTC.CG.CC.CC.CCCCCCGCCCCGCCGG.GGGCGGCCGCTTTCGCGCCG.CGGGGGCGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCtt < 2:5929443/99‑1 (MQ=9)
ccacgcgg.g..CCCT..GG.CC.CC.CG.CCCCCCCCCCCCTGCGGCGGGCGCATGCGCGCCG.CGGGGGCGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTg < 2:365556/94‑1 (MQ=9)
ccagaggccccGC.GC.CC.GG.CC.CCCCCCCCGCCAT.GGGCGGGCGCTTTCGCGCCG.CGGGGGCTGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTgg < 2:5024391/93‑1 (MQ=14)
g.g..CCCTC.GG.CC.TG.CG.CCCGCCCCGCCAT.CGGCGGGGGCCTTCGCCCCC.CCGGGGGTGGGGGCCGGGCCCCGG.CCTGC.TTGGGGGGACGGGCTTGGGACCgg > 1:1776787/1‑101 (MQ=9)
g.CC.TG.CG.CCCGCCCCGCCAT.CGGCGGGGGCATTCGCGCCG.CCCGGGGTGGGGGCAGGGCCCCGT.CGTGG.TTGGGGGAAAGGGCTTGGGGCAGGGGATgggc > 2:6195167/1‑101 (MQ=12)
cggcccccccccccccccgcCGG.GGGCGGGCGCTTGCGCGCGG.GGGGGGGGGGCCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATg < 1:2010279/91‑1 (MQ=12)
gcccgg.cccccccGCCCAT.CGGGGGGCGCTTTCGCGCCG.CGGGGGGGGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGcc < 2:166538/96‑1 (MQ=18)
tG.CG.CCCGCCCCGCCAT.CGGCGGGCGCATTCGCGCCG.CCGGGGGGGGGCGCCGGCCTCTGT.CGTGC.TTGGGGGAACGGGCTTGGGACAGGGGATGGGCCac > 1:6015289/1‑100 (MQ=17)
ccgcccccccccccgcCGG.GGGCGGGCGCGGCGGCGCGG.CGGGGGGGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGcc < 1:5332485/95‑1 (MQ=12)
ccccccccccccccccCGG.CGGGGGGCGCTTCCGCCCCG.CGGGGGGGGGGCAAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGcc < 1:6556879/95‑1 (MQ=16)
cccccccccccccgcCGT.GGGCGGGCGCTTCCGCGCCG.GGGGGGGGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCa < 1:3002562/96‑1 (MQ=18)
gccccccgccccgcCAT.CGGCGGGCGCGTGCGCGCGG.GGGGGGGGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAg < 2:4804106/97‑1 (MQ=18)
gcccccccccccgcCCT.CGGCGGGCGCATGCGCGCCG.CGGGGGCGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAg < 1:3531685/97‑1 (MQ=18)
gccccccccccccCCG.CGGGGGGCGCATGCGCGCCG.CGGGGGGGGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAgc < 1:883615/98‑1 (MQ=21)
cg.cccgccCCGCCAT.CGGCGGGCGCAATCGCGCCC.CCCGGGGGGGAGGCCGGGCCCCGG.CGTGC.TTGGGGGAAAGGGCTTGGCACAGGGGGTGCGCCCgcg > 2:4857516/1‑101 (MQ=9)
cccccccccccgcCAG.GGGGGGGCGCATTCGCGCGG.CGGGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAgc < 2:910083/98‑1 (MQ=21)
g.cccgcccCGCCAT.CGGCGGGGGCATTCGCGCCG.CCCGGGGGGGGGGCAGGGCCCCGT.CGTGCTTTGGGGAAAGGGCTTTGGC.CACGGGGAGCGCCAgcgg > 2:1408973/1‑101 (MQ=9)
g.cccgcccCGCCAT.CGGCGGGGGCATTCGCGCCG.CCCGGGCCGGGGGGCGGCCCCTGT.CGTGC.TTTGGGGAAAGGGCGTGGCACAGGGGATGGGCCAgcgg > 2:5105594/1‑101 (MQ=16)
ccccccccccgcCGG.GGGCGGGCGCCTCCGCGCGG.GGGGGGCGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAgcg < 1:2768838/99‑1 (MQ=21)
cccccccgccGC.CGGCGGCCCCGCGCGCGCCG.CGGGGGGGGGGAAAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAgcgggc < 1:1481104/98‑1 (MQ=19)
cccccccgccCG.CGGCGGGCGCTCCCGCGCGC.CGGGGGCGGGGGGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAgcgggc < 1:5642046/98‑1 (MQ=18)
cccgccTT.GGTCGGGCGCGTTCGCGGGG.CGGGGGCGGGGCCCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCgggg < 1:3455725/101‑1 (MQ=21)
cgcggggggcgggcgGTTCCGCGCGG.GGGGGGCGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGaa < 1:4700951/94‑1 (MQ=21)
gccccgggggggcgCGTTCGCGCGG.CGGGGGGGGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGaaa < 1:1223747/92‑1 (MQ=25)
gtgggggggcgCGTTCGCGCCG.CGGGGTGGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGc < 2:2725239/95‑1 (MQ=25)
gggcgggcgCGCGCGCGCCG.GGGGGGGGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAg < 2:3569870/100‑1 (MQ=25)
cggcggGCGCATTCGCGCCG.CCGGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGGGGGGGGGGAAAGGGAg > 2:3960337/1‑101 (MQ=255)
cggcggGCGCATTCGCGCCG.CCGGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGGAAGGCAg > 2:1708429/1‑101 (MQ=255)
cggcggGCGCATTCGCGCCG.CCGGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAg > 1:4506481/1‑101 (MQ=255)
ggcgggcgCATTCGCGCCG.CCGGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGt > 1:3850930/1‑101 (MQ=255)
cgggcgCATCGGCGCCG.CGGGGGGGGGGCACAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGc < 1:835378/101‑1 (MQ=25)
cgggcgCACGCGCGCCG.GGGGGGCTGGCAGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGc < 2:3288973/101‑1 (MQ=25)
gggcgCATTCGCGCCG.CCGGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGcc > 2:6875855/1‑101 (MQ=255)
gggcgCATTCGCGCCG.CCGGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGcc > 1:6112177/1‑101 (MQ=255)
gtggcATGCGGGCCG.CGGGGGTTGGGCAAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCt < 2:4195880/98‑1 (MQ=25)
gcccggccgccCCG.CGGGGGGGGGGCAAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCtt < 1:4285612/94‑1 (MQ=25)
cATTCGCGCCG.CCGGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTcc > 1:5984203/1‑101 (MQ=255)
aTTCGCGCCG.CCGGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTccc > 1:1803954/1‑101 (MQ=255)
tgcgggccg.cgGGGGCGGGGCAAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCg < 2:1942687/96‑1 (MQ=25)
gccccgccg.cGGGGGCGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCg < 2:6440010/97‑1 (MQ=25)
tcccccccccgGGGGGGGGCGCCGGCCTCTGC.TGCGC.CTGGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGAAAGGCAGTGCCTTTCCTGa < 1:7002272/93‑1 (MQ=25)
cgcgCCG.CGGGGGGGGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGAt < 2:1035904/101‑1 (MQ=255)
ccgccg.cGGGGGGGGGGCAAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATc < 2:3848679/100‑1 (MQ=25)
gccggggggggCGGGGCAAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATcc < 2:5319322/94‑1 (MQ=25)
g.ccgGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGCTCCGccc > 1:1389549/1‑101 (MQ=255)
g.ccgGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGCGCCTTTCCCGATCCGccc > 2:6452168/1‑101 (MQ=255)
ggggCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGaa > 2:5718504/1‑101 (MQ=255)
ggggCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGaa > 2:5133921/1‑101 (MQ=255)
ggggCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGaa > 2:1101180/1‑101 (MQ=255)
gggCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGaaa > 1:3655715/1‑101 (MQ=255)
gggCGGGGCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGaaa < 2:3543005/101‑1 (MQ=255)
ggCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGTCCGAAAc > 1:3981220/1‑101 (MQ=255)
ggggggCGAAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAAcc < 1:1853194/98‑1 (MQ=255)
gggggaaaaGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCt < 2:6633755/93‑1 (MQ=255)
tGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCCCCCGAAACCTg > 1:5832249/1‑101 (MQ=255)
gggacgcAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTg < 1:5906432/97‑1 (MQ=255)
gggCGCAGGCCTCTGT.CGTGC.TTGGGCAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTgg < 1:1142644/101‑1 (MQ=255)
gcaaaGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTgggg < 1:3624363/97‑1 (MQ=255)
gcaaaGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTgggg < 1:7065874/97‑1 (MQ=255)
gaaaGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGa < 1:267791/98‑1 (MQ=255)
gcAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGAc < 2:451751/101‑1 (MQ=255)
gcAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGAc > 2:6711220/1‑101 (MQ=255)
gcAGGCCTCTGT.CGTGC.GTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGAc < 2:1139848/101‑1 (MQ=255)
cAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACt > 1:2138153/1‑101 (MQ=255)
cAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACt < 1:1084318/101‑1 (MQ=255)
aaGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACt < 1:3271507/100‑1 (MQ=255)
aGGCCTCTGT.CGTGC.TTGGGGCAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTc < 2:4575192/101‑1 (MQ=255)
aGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTc < 2:1843203/101‑1 (MQ=255)
aGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTc > 2:1339270/1‑101 (MQ=255)
aGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTc < 1:682049/101‑1 (MQ=255)
ggCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCa < 1:4857760/101‑1 (MQ=255)
gCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCAg < 1:6283556/101‑1 (MQ=255)
ctctctGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCAg < 2:436399/99‑1 (MQ=255)
ctctGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCAgag > 1:436411/1‑99 (MQ=255)
ctctGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCAGcc > 2:3099594/1‑101 (MQ=255)
ctctGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCAGcc > 1:662418/1‑101 (MQ=255)
ctctGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCAGcc < 1:5553523/101‑1 (MQ=255)
ctGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCAGCCcg < 2:3688591/101‑1 (MQ=255)
ctGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCACGATCTGCCCGACACCTAGTGACTCAGCCcg > 2:4652478/1‑101 (MQ=37)
t.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCAGCCCGCGa < 2:6031007/101‑1 (MQ=255)
cGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCAGCCCGCGAt < 1:1622675/101‑1 (MQ=255)
cGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGAGCCAGCGGGCGGGGGAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCACCACCCGAt > 2:2222697/1‑101 (MQ=25)
gTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCAGCCCGCGAtt < 1:2228891/101‑1 (MQ=255)
|
CCGTGACCGCCGGGGGCCCA.AAG.G..CCCTC.GG.CC.TG.CG.CCCGCCCCGCCAT.CGGCGGGCGCATTCGCGCCG.CCGGGGCTGGGCGCAGGCCTCTGT.CGTGC.TTGGGGAAACGGTCTTGGCACAGGTGATGCGCCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGATCCGCCCGAAACCTGGGGACTCAGCCCGCGATT > NC_014034/3037857‑3038052
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|