Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 3,068,163 | A→T | 2.0% | intergenic (‑146/+146) | glcD ← / ← RCAP_rcc02872 | glycolate dehydrogenase, subunit GlcD/hypothetical protein |
Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 3,068,163 | 0 | A→T | 2.0% | 5.4 ‑1.1 ‑0.2 | 249 | intergenic (‑146/+146) | glcD/RCAP_rcc02872 | glycolate dehydrogenase, subunit GlcD/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (5/0): ref base (173/71): total (178/71) | ||||||||||
Fisher's exact test strand distribution p-value = 3.25e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.52e-01 |
Only 100 of 319 total aligned reads displayed.
ATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGC > NC_014034/3068063‑3068263
|
aTTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCa < 2:343688/101‑1 (MQ=255)
aTTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCa > 2:1074062/1‑101 (MQ=255)
cgcAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGcgcc > 2:2691120/1‑101 (MQ=255)
gcAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGcgccc < 2:869260/101‑1 (MQ=255)
aaCCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGcgcccgc > 1:7133369/1‑101 (MQ=255)
aaCCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGcgcccgc > 2:5634514/1‑101 (MQ=255)
ccGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCgcccgccc > 2:2016364/1‑101 (MQ=255)
cGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGcccgcccc < 2:4598066/101‑1 (MQ=255)
gAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGcccgccccg > 1:5476262/1‑101 (MQ=255)
aaCGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCccgccccgcc > 2:6901088/1‑101 (MQ=255)
aCGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCcgccccgccc < 2:5875479/101‑1 (MQ=255)
gATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCAt > 2:6422150/1‑101 (MQ=255)
gATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCAt < 1:934988/101‑1 (MQ=255)
gATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCAt > 1:3456734/1‑101 (MQ=255)
gATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCAt < 1:1204179/101‑1 (MQ=255)
aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATg > 2:1631865/1‑101 (MQ=255)
aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATg < 2:4000670/101‑1 (MQ=255)
gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATggc < 2:4785860/101‑1 (MQ=255)
gCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATggcgg > 1:375218/1‑101 (MQ=255)
cAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATggcggg > 2:1856060/1‑101 (MQ=255)
aGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATggcgggg > 1:4985546/1‑100 (MQ=255)
aGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATggcgggc > 1:5669048/1‑101 (MQ=255)
gCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGgcgc > 1:2147477/1‑101 (MQ=255)
gCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGGGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGgcgc < 1:334386/101‑1 (MQ=255)
cTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCt > 1:6702253/1‑101 (MQ=255)
tGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCtt < 2:735987/101‑1 (MQ=255)
gACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTtc < 2:3971667/101‑1 (MQ=255)
gACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTtc < 1:5982952/101‑1 (MQ=255)
aCCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTtct < 2:7062348/101‑1 (MQ=255)
ccGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGGGCCtctc > 2:2639815/1‑101 (MQ=255)
cGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTtctcc > 1:5576502/1‑100 (MQ=255)
gAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGGGCTTCTcgc > 2:5279342/1‑101 (MQ=255)
aGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTcgcc > 2:4252239/1‑101 (MQ=255)
aGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTcgcc > 1:3811616/1‑101 (MQ=255)
aGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGCCCAGCCCCCGCCCAGCCCATGGGGGGCGCTTCTcccc > 1:1784442/1‑101 (MQ=17)
ggCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTcgccc < 2:2380221/101‑1 (MQ=255)
gCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTcgcccc > 1:4181283/1‑100 (MQ=255)
cATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTcgcccgcc > 1:190081/1‑101 (MQ=255)
agcGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCccgccg < 1:2612853/99‑1 (MQ=255)
aTCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCcccccg > 2:5128545/1‑101 (MQ=255)
tCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCgg < 2:6355028/101‑1 (MQ=255)
cGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGGGCTTCTCGCCCCCCcgg > 2:2400206/1‑101 (MQ=255)
ccGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGgggc < 2:5900992/101‑1 (MQ=255)
cGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCGCAAA.GGCCCTCGGCGAGCGCCCGCCCCGCCCATGGCGGGCGCCTCTcgcccgcgcgcgcg > 1:2320545/1‑94 (MQ=17)
cGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGgggcg < 2:6571944/101‑1 (MQ=255)
cGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGgggcg > 1:5908862/1‑101 (MQ=255)
cGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCCTCTCGCCCGCCCgggcg > 1:5180238/1‑101 (MQ=255)
cGAGGTCATGCGGAACAGTGGCCTCGTGACCACCGAGGGCCCAAA.GGCCATCGGACAGCGCCCGCCCCGCCCATGGCGGGGGCATATCGCCCCCCagggag > 2:3031153/1‑99 (MQ=17)
gAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCCTCTCGCCCGCCGgggcgg > 2:1919860/1‑101 (MQ=255)
gAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCACTTCTCGCCCGCCCgggcgg > 1:6851169/1‑101 (MQ=255)
gggTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGgggcggg < 1:4558195/100‑1 (MQ=255)
aGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGGGCTTCTCGCCCGCCGgggcggg > 2:5344913/1‑101 (MQ=255)
tCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCCGGGCGGgcgc > 2:2186769/1‑101 (MQ=255)
cATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCCCCCGGGCGGGGGcc > 2:3842292/1‑101 (MQ=255)
tGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCgg < 2:5546431/101‑1 (MQ=255)
gCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCCGc > 1:2389918/1‑101 (MQ=255)
cggTGGCCTGGGGCCCGCCGGGGGCCCAAG.GCCCCCCGGCCGGCCCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTctgc < 2:4029572/99‑1 (MQ=11)
cAGTGGCCTCGGGACCGCCGAGGGCCCAAG.GCCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTctgc < 1:5799025/101‑1 (MQ=255)
cAGTGCCCTCGTGCCCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTccgc < 1:1378865/101‑1 (MQ=255)
aGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGGGGCGGCCCccgct > 1:6315245/1‑101 (MQ=14)
gTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGGGCCCGCCCccgctc > 2:6089498/1‑100 (MQ=14)
tGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCtgctgc > 2:3379585/1‑101 (MQ=255)
ggCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGGGCCGGGCCCTGCTgcg > 2:115954/1‑101 (MQ=255)
ggCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTgcg > 1:269031/1‑101 (MQ=255)
cccgggcccgccgGGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCt < 1:6143391/94‑1 (MQ=255)
cTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCCCCGCCGCGccc > 1:1492076/1‑100 (MQ=255)
tCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCCCTGCTGCGcccg > 1:4909535/1‑99 (MQ=255)
cGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCCGGGCGGGCGCCGGCCCCTGCTGCGCCC.gg > 2:3503763/1‑101 (MQ=255)
cGTGACCGCCCAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGGGCCGGCCTCTGCTGCGCCC.gg > 2:1503253/1‑101 (MQ=255)
agacccgccg.GGGCCCAAA.GGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCCTCTCCCCCGCCGGGGCCGGCCCCCGCCCCTGCCCCGCCttacg > 1:817200/5‑97 (MQ=11)
tGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGGGCCGGCCTCTGCTGCGCCT.gggg > 1:6423179/1‑101 (MQ=255)
ggcccgccgGGGGCCAAAA.GCCCCTCGGCCGGCCCCCCCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.gggg < 1:3688509/98‑1 (MQ=14)
gACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGGGCCCGCCCCTGCCGCGCCT.tgggg > 2:2210500/1‑100 (MQ=14)
cccgccgAGGGCCCAAG.GCCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGaa < 2:57783/100‑1 (MQ=255)
gccgAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGGGCCGGCCCCCGCTGCGCCC.gggggcacg > 2:6825239/1‑96 (MQ=14)
gccgAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGGGCCCGCCTCTGCTGCGCCC.GGGGCAACg > 2:4344764/1‑101 (MQ=14)
ccgAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACgg > 2:4443304/1‑101 (MQ=255)
ccgAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCCCTGCTGCGCCT.GGGGGAACgg > 1:1027589/1‑101 (MQ=255)
cgAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGt > 1:3105435/1‑101 (MQ=255)
cgAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCC.GGGGGAACggg > 2:5073501/1‑100 (MQ=255)
gggCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCtt > 2:3603584/1‑101 (MQ=255)
gcccacAAC.GGCCCCCGGCCGGCGCCCGCCCCGCCCCTGGCGGGCGTTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCt < 1:2209889/96‑1 (MQ=11)
ggCCCAAG.GGCCCCCCTCCCCCGCCCGCCCCCCCCCTCGCGCGCCCCTCTCCCCAGCCGGGCCGGCCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTg < 1:626369/101‑1 (MQ=9)
cccAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCGATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCCCTGCTGCGCCT.GGGGGAACGGGCTTGGc > 1:5432623/1‑101 (MQ=17)
ccAAAGGGCCCCCGGCCGGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGc < 2:6144941/101‑1 (MQ=18)
ccAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGGCTTGGCa > 1:6994947/1‑101 (MQ=255)
cAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.CGGGAAACGGTCTTGGCAc > 1:2514093/1‑101 (MQ=255)
cAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCC.GGGGGAACGGTCTTGGCAc > 1:5241203/1‑101 (MQ=255)
aa.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACGGTCTTGGCACCg > 2:1237175/1‑101 (MQ=255)
aa.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACGGGCTTGGCAccc > 1:468777/1‑100 (MQ=255)
a.GGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCCCCCCCCCGGCCCGGGGCCGGCCGCGGTCGCGCTC.GGGGGGACGGGCGTGGCCCCgg > 1:6554013/1‑100 (MQ=2)
ggCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACGGTCTTGGCACCGcc > 2:1048862/1‑101 (MQ=255)
ggCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCCCTGCTGCGCCC.GGGGAAACGGGCTTGGCACCGcc > 2:6993727/1‑101 (MQ=255)
ggCCCCCGCCCAGCCCCCGCCCCGCCCAGGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGcc < 2:6463748/101‑1 (MQ=18)
gccccCCGGCCGGCCCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGcc < 2:4509273/99‑1 (MQ=255)
gCCCTCGCCCAGCCCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGccc < 1:2961039/101‑1 (MQ=255)
cccTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACGGTCTTGGCACCGCCCg > 1:4629744/1‑101 (MQ=255)
cTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCcgg > 2:2995587/1‑101 (MQ=255)
cGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGGACGGTCCTGGCACCCCCCCGGcc > 2:2888433/1‑100 (MQ=17)
ggCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACGGTCTTGGCACCGCCCGGGCTc > 1:1586202/1‑101 (MQ=255)
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ATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGC > NC_014034/3068063‑3068263
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|