| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,068,180 | T→C | 2.0% | intergenic (‑163/+129) | glcD ← / ← RCAP_rcc02872 | glycolate dehydrogenase, subunit GlcD/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,068,180 | 0 | T→C | 2.0% | 2.6 ‑1.8 ‑0.8 | 251 | intergenic (‑163/+129) | glcD/RCAP_rcc02872 | glycolate dehydrogenase, subunit GlcD/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (5/0): ref base (158/85): total (163/88) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.68e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.72e-01 | ||||||||||
Only 100 of 312 total aligned reads displayed.
GATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGAAAGGCAGT > NC_014034/3068080‑3068280
|
gATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCAt < 1:1204179/101‑1 (MQ=255)
aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATg > 2:5234158/1‑101 (MQ=255)
aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATg > 2:1631865/1‑101 (MQ=255)
aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATg < 2:566751/101‑1 (MQ=255)
aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATg > 1:979724/1‑101 (MQ=255)
tGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATgg < 2:3999737/101‑1 (MQ=255)
gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATggc > 1:5384933/1‑101 (MQ=255)
gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATggc < 2:4785860/101‑1 (MQ=255)
gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATggc > 1:5693396/1‑101 (MQ=255)
aGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATggcgggc > 2:4661523/1‑101 (MQ=255)
tGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGgcg.cct > 2:1051680/1‑99 (MQ=255)
tGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.Ctt < 2:735987/101‑1 (MQ=255)
aCCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTtct < 2:7062348/101‑1 (MQ=255)
aCCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTtct < 2:6425228/101‑1 (MQ=255)
ccGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTtctc < 1:3389793/101‑1 (MQ=255)
ccGAGGCCATCCCCGAGGTCATGCGGAACAGTGGCCTCGTGCCCGCCGAGGGCCCAAAGGCCCTCGGCC.GGCGCCCGCCCCGCCCATGGCGGGCG.CTtctc < 1:2379142/101‑1 (MQ=255)
aGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGGG.CTTCTcgcc > 2:3016034/1‑101 (MQ=255)
aGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTcgcc > 2:4252239/1‑101 (MQ=255)
ggCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTcgccc < 2:4505439/101‑1 (MQ=255)
cATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTcgcccgcc > 1:190081/1‑101 (MQ=255)
ctCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCccgccg < 2:3097564/100‑1 (MQ=255)
agcGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCccgccg < 1:2612853/99‑1 (MQ=255)
aTCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCcccccg > 2:5128545/1‑101 (MQ=255)
tCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCgg < 2:6355028/101‑1 (MQ=255)
cGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCggg > 1:6686075/1‑101 (MQ=255)
ccGAGGTCATGCGGAACAGTGCCCTCGTGCCCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGgggc < 2:6883215/101‑1 (MQ=255)
cGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGgggcg > 1:5908862/1‑101 (MQ=255)
gAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CCTCTCGCCCGCCGgggcgg > 2:1919860/1‑101 (MQ=255)
gAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCA.CTTCTCGCCCGCCCgggcgg > 1:6851169/1‑101 (MQ=255)
gTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGTCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGggcgggcg > 2:3458825/1‑101 (MQ=255)
cATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGGGcc > 1:4916222/1‑101 (MQ=255)
aTGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGGGCCg > 2:887945/1‑101 (MQ=255)
aTGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCg < 2:5896562/101‑1 (MQ=255)
gAACAGTGGCCTCGTGCCCGCCGAGGGCCCAAGGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCctc < 1:4324104/101‑1 (MQ=255)
gAACAGTGGCCTCGTGCCCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCctc < 2:6563668/101‑1 (MQ=255)
gAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCctc < 2:2199214/101‑1 (MQ=255)
gAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CCTCTCGCCCGCCGGGGCGGGCGCCGGcccc > 2:6169153/1‑99 (MQ=255)
aaCGGTGCCCCCGGGCCCCCCGGGGCCCCAAGGCCCCTCGCCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCctct < 1:727314/101‑1 (MQ=1)
aaCAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGGG.CTTCTCGCCCGCCGGGGCGGGCGCCgggccct > 1:6464078/1‑96 (MQ=255)
aaCAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATAGCGGGCG.CCTCTCCGCCGCCGCGGCGGGCGCCGGccccc > 2:2399378/1‑98 (MQ=17)
cggTGGCCTGGGGCCCGCCGGGGGCCCAAGGCCCCCCGGCC.GGCCCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTctgc < 2:4029572/99‑1 (MQ=11)
cAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTctgc > 1:6103633/1‑101 (MQ=255)
cAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCCCCCGCCGGGGCGGGCGCCGGCCTctgc > 2:4327636/1‑101 (MQ=255)
cAGTGCCCTCGTGCCCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTccgc < 1:1378865/101‑1 (MQ=255)
aatGGCCCCGTGACCGGCGAGGGCCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGCCATCGGCGGGGGCCGTGGCGCCCCCCGGGGGGGGGGGCGGccccccg > 1:1781749/3‑96 (MQ=17)
aGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGGGGCGGCCCccgct > 1:6315245/1‑101 (MQ=14)
gTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGGGCCCGCCCccgctc > 2:6089498/1‑100 (MQ=14)
ggCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCCGGGCGGGCGCCGGCCCCCGCTccg > 1:1491831/1‑101 (MQ=14)
gCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCCGCCCCTGCTgcgc > 1:5460333/1‑101 (MQ=255)
cccgggcccgccgGGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCt < 1:6143391/94‑1 (MQ=255)
ccGTGCCCGCGGAGGGCCAAAGGGCCCTCGCCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.g < 2:5834901/100‑1 (MQ=14)
caagacccgccg.GGGCCCAAAGGCCCCCGGCC.AGCGCCCGCCCCGCCCATGGCGGGGG.CTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCCGGCCCGCCT.gg > 1:1552921/7‑101 (MQ=17)
cGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCCGCGCCT.gg > 1:2402633/1‑101 (MQ=255)
gTGACCGGCGAGGGCCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGCCATCGGCGGGCGCCGTCGCGCCCCCCGGGGGGGGCGCCAGCCCCCGGTTCGCCttg > 2:3833861/1‑99 (MQ=11)
gTGACCACCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGGGCCGGCCTCCGCCGCGCCC.ggg > 1:845538/1‑101 (MQ=14)
ggcccgccgAGGGCCCAACGCCCCTCGCCC.GGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.gggg < 2:5531164/98‑1 (MQ=14)
gACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCCGCTGCGCCC.GGGGa > 1:6973481/1‑101 (MQ=255)
cccgccgGGGGCCCAAGGGCCCCCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGaa < 2:4358011/100‑1 (MQ=255)
gccgAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACg > 1:3723417/1‑101 (MQ=255)
ccgAGTGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGGCGGCCTCTGCTGCGCCC.GGGGGAACgg > 2:3519777/1‑101 (MQ=14)
ccgAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACgg > 1:4125485/1‑101 (MQ=255)
ccgAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCCCTGCTGCGCCT.GGGGGAACgg > 1:1027589/1‑101 (MQ=255)
cgggggCCCAAAGGCCGCCGGCC.AACGCCCGCCCCGCCCATGGCGGGGG.CGTCTCCCCCCCCCCGCCGGGGGGCGGGCCCGGGTGCGCCT.CGGGGGACggg > 2:3395695/4‑100 (MQ=2)
cgAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGt > 1:3105435/1‑101 (MQ=255)
cgAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCC.GGGGGAACggg > 2:5073501/1‑100 (MQ=255)
cgAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCCGCCCCCGCTGCGCCT.GGGGAAACggg > 2:1329601/1‑100 (MQ=255)
gAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACgggc > 1:4603346/1‑99 (MQ=255)
gAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACgggc > 2:3969481/1‑99 (MQ=255)
gcccacAACGGCCCCCGGCC.GGCGCCCGCCCCGCCCCTGGCGGGCG.TTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCt < 1:2209889/96‑1 (MQ=11)
gccccAAGGGCCCTCGGCC.GGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTg < 1:5238787/99‑1 (MQ=255)
cccAAGGCCCCCCGCCC.GGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGCTCTTGGc < 2:2594632/101‑1 (MQ=17)
cccAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGc > 1:1925563/1‑101 (MQ=255)
cAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGGCTTGGCAc > 2:2357918/1‑101 (MQ=255)
cacggCCCCCGGCCGGGCCCCCGCCCCGCCCCTGGCGGGCG.CTTCTCGCCCGCCGGGCGGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTgcac < 2:2052040/98‑4 (MQ=11)
aaGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACGGGCTTGGCAccc > 1:468777/1‑100 (MQ=255)
aGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGGCCCTGCTGCGCCT.GGGGAAACGGGCTTGGCACCGc > 1:5159385/1‑101 (MQ=255)
aGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCCTGGCACCGc > 2:1896524/1‑101 (MQ=255)
ggCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCCCTGCTGCGCCC.GGGGAAACGGGCTTGGCACCGcc > 2:6993727/1‑101 (MQ=255)
gCCCTCGCCC.AGCCCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGccc < 1:2961039/101‑1 (MQ=255)
cccCCGGCC.AGCGCCCGCCCCGCCCAGGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCg < 1:560781/101‑1 (MQ=255)
ccTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACGGGCTTGGCACCGccccg > 2:2988016/1‑99 (MQ=255)
ccccgcccggcgcCCGCCCCGCCCGTGGCGGGCG.CTTCTCGCCCGCCGGGGGGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCgg < 1:2548961/92‑1 (MQ=17)
gCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACGGTCTTGGCACCGCCCGGGCTcc > 2:1116030/1‑101 (MQ=255)
gCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCCGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCCGGCTcc > 2:2673835/1‑101 (MQ=255)
gcgggcgcCCGCCCCGCCCAGGGCGTGCG.CTTCTCGCCCGCCGGGGGGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTcc < 2:5576212/97‑1 (MQ=18)
cc.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCcg > 1:1808540/1‑101 (MQ=255)
ccggcgcCCGCCCCGCCCATGGGGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCcg < 1:5513856/98‑1 (MQ=255)
cgcccgccCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCCGGCTCcggcgg > 1:3303185/1‑101 (MQ=255)
gcccgcccCGCCCGGGGCGGGCG.CTTCTCGCCCGCGGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCggcggg < 2:1749750/101‑1 (MQ=255)
gcccgcccCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCCCCCGGGCTCCggccgg > 1:6227555/1‑101 (MQ=255)
cccgccccgcCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCggcgggc > 1:5975307/1‑101 (MQ=255)
ccgccccgccCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCggcgggcg > 1:2723125/1‑101 (MQ=255)
gccccgcccATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGcgggcggg > 1:3609675/1‑101 (MQ=255)
ccccgcccATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGGCTCTGCTGCGCCT.GGGGAAACGGGCTTGGCACCGCCCGGGCTCCGGCGGGCgggg > 2:2888014/1‑101 (MQ=255)
cccgcccATGGCGGGCG.CTTCTGGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGa < 2:2302187/101‑1 (MQ=255)
cccgcccATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGa > 1:378817/1‑101 (MQ=255)
cccgcccATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGa > 1:2656226/1‑101 (MQ=255)
cgcccAGGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGaaa < 2:6701911/101‑1 (MQ=255)
ccATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGGAAGGc > 2:5310600/1‑101 (MQ=255)
ccATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGGAAGGc > 2:1221274/1‑101 (MQ=255)
|
GATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGAAAGGCAGT > NC_014034/3068080‑3068280
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 22 ≤
ATCG
< 31 ≤
ATCG
< 40 ≤
ATCG
|