| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,439,792 | G→A | 5.7% | intergenic (‑95/+68) | RCAP_rcc03240 ← / ← mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,439,792 | 0 | G→A | 5.7% | 19.6 ‑1.3 ‑0.0 | 241 | intergenic (‑95/+68) | RCAP_rcc03240/mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Reads supporting (aligned to +/- strand): new base (5/9): ref base (116/111): total (121/120) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.86e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.98e-01 | ||||||||||
Only 100 of 314 total aligned reads displayed.
GCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGA > NC_014034/3439692‑3439894
|
gcTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGAATTTTGGGGAAGAT.AAAgg > 1:3785291/1‑101 (MQ=255)
cTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGAAGAG.AAAagg > 1:1708139/1‑101 (MQ=39)
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGCGATTGGGGGCAA.AT.AAAGGGgct > 1:1067935/1‑101 (MQ=255)
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGGAGAT.AAAgggggt > 2:1425174/1‑99 (MQ=255)
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTTGGGGGAGAG.AAAgggggt > 1:6548991/1‑99 (MQ=255)
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGgct < 1:2247444/101‑1 (MQ=255)
ggcggcGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGgcttt < 2:5372759/101‑1 (MQ=255)
gcggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGgctttg < 2:2692575/101‑1 (MQ=255)
ggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGCAGAT.AAAGGGgctttgc.t > 2:6385392/1‑101 (MQ=255)
gcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGgctttgc.tt < 2:1039143/101‑1 (MQ=255)
gcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGgctttgc.tt < 1:298368/101‑1 (MQ=255)
gcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGgctttgc.tt < 1:2723337/101‑1 (MQ=255)
gACCCTACACGGCGCGGCCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.tttt < 2:1895917/101‑1 (MQ=255)
gACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTGGGGGGAGAG.AAAAGGGGTTTGC.tttt > 2:4502665/1‑101 (MQ=255)
gACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGGAAGAT.AAAGGGGCTTTTC.tttt > 1:886000/1‑101 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTTGGGCAAGATAAAAGGGGGTTTGT.ttttt > 1:1618485/1‑100 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTAt < 1:7036369/101‑1 (MQ=255)
cTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTGGGGCAAGAG.AAAGGGGGTTTGC.TTTTAttt > 1:1909414/1‑99 (MQ=39)
cTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTagat > 1:116295/1‑98 (MQ=255)
tACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.tt < 1:5911957/101‑1 (MQ=255)
acacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTGGGGGAAGAT.AAAAGGGGGTTGC.TTTTTTT.ttt > 1:6348841/1‑101 (MQ=255)
acacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.ttt < 2:1168681/101‑1 (MQ=255)
cacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..c < 2:5439453/101‑1 (MQ=255)
ggCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..cccc < 2:3505286/101‑1 (MQ=255)
ggCGCAACCAGCTTGCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..cccc < 2:2609785/101‑1 (MQ=255)
gcgcGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGAATTTTGGGGAAGAT.AAAAGGGGTTTGC.TTTTTTT.TTT..ccccc > 1:2001622/1‑100 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCaaa < 1:372520/101‑1 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCaaa < 1:4100347/101‑1 (MQ=255)
cgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAat < 2:4677933/101‑1 (MQ=255)
gACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGAAGAT.AAAAGGGCTTTGC.TTTTTTCTTTT..CCCCaaaa > 1:5292946/1‑100 (MQ=38)
gACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAata < 2:4037015/101‑1 (MQ=255)
cAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGCAAGAT.AAAGGGGCGTTGC.TTTTTTT.TTT..TCCCAAATATcc > 1:2877760/1‑101 (MQ=38)
tttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGAAGAT.AAAGGGGGGTTTC.TTTTTTT.TTT..CCCCAAAAATTCCggg > 2:5150565/1‑101 (MQ=37)
ttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCgggg < 1:5534737/101‑1 (MQ=255)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTTGGGGAAGAT.AAAGGGGCTTTGC.TTTTTTT.TTT..TCCCAAATATCCCgggggg > 1:6708010/1‑100 (MQ=255)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGGTTTGC.TTTTATC.TTT..TCCCCAATATCCCgggggg > 2:4454851/1‑100 (MQ=255)
aaaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTGGGGGAAGAA.AAAAGGGCGTTGT.TTTTTTT.TTTTCCCCCAAATCCCCCgggggg > 1:4763077/1‑100 (MQ=255)
aaaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGc < 2:6981681/101‑1 (MQ=255)
aaaGACAGGAATTCGGCCTGAGGCCGATGCCTCCGGC.GGGGGTATTTGGGGCAAGAT.AAAAGGGGTTTGCTTTTTTTT.TTT..CCCCAAAAATCCGggggggg > 1:6384628/1‑99 (MQ=25)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..g < 1:3082657/101‑1 (MQ=255)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..g < 2:6200039/101‑1 (MQ=255)
aGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGAATTTGGGGGAAAAT.AAAGGGGCTTTGG.TTTTTTC.TTT..CCCCCCAAATCCCgggggggggg > 1:1255659/1‑96 (MQ=255)
aCAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGGAAGAT.AAAGGGGGTTTGC.TTTTATT.TTT..TCCCAAATATCCCGGGGGTGC..gggg > 2:5616182/1‑101 (MQ=37)
aCAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTTTC.TTT..CCCCCAATATCCCGGGGGTGC..gggg > 2:3646884/1‑101 (MQ=255)
aGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTTTC.TTT..CCCCCAATATCCCCGGGGGGC..GGGGGc > 1:1124096/1‑101 (MQ=37)
aGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCATATATCCCGGGGGTGC..GGGGGc > 2:1546605/1‑101 (MQ=255)
aGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGc < 1:3184716/101‑1 (MQ=255)
aGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGc < 2:4240369/101‑1 (MQ=255)
aGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGc < 1:6233208/101‑1 (MQ=255)
ggAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTTGGGCAAGAT.AAAGGGGGTTTGC.TTTTATC.TTT..CCCCCAATATCCCGGGGGGGG..ggggggg > 1:679386/1‑99 (MQ=37)
gAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTTGGGGAAGAT.AAAGGGGGTTTGC.TTTTATC.TTT..TCCCCAATATCCCCGGGGTGC..GGGGGGag > 2:5927015/1‑101 (MQ=255)
tCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGAAGAT.AAAGGGGCTTTGC.TTTTTTC.TTT..CCCCAAATATCCCGGGGGGGC..GGGGGCagaggc > 2:4142159/1‑99 (MQ=38)
tCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGc.c < 2:180082/101‑1 (MQ=255)
cGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTTGGGGAAGAT.AAAGGGGGTTTGC.TTTTATC.TTT..CCCCAAATATTCCGGGGGGGC..GGGGGCAGAGg.cc > 2:645105/1‑101 (MQ=37)
cGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTTGGGGAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGc.cc > 2:76352/1‑101 (MQ=255)
cGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGc.cc < 1:259569/101‑1 (MQ=255)
ggCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGc.ccc < 2:1296618/101‑1 (MQ=255)
ggCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGc.ccc < 1:6053156/101‑1 (MQ=255)
ccTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCCcg > 1:3284537/1‑101 (MQ=255)
ccTGCGGCCGATGCCGCCGGC.GGGGATATCTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCCcg < 1:4502904/101‑1 (MQ=255)
tgactttcGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.GAA.ACCCATCCC.TTTCATC.TTG..CCCCAAATATCCCGGGGGGCCCGGGGGGCAGCGc.ccccc < 2:5759785/94‑2 (MQ=25)
ctttcGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.GAA.ACCCATCCC.TTTCATC.TTG..CCCCAAATATCCCGGGGGGCCCGGGGGGCAGCGc.cccccgcc < 1:5462351/97‑5 (MQ=25)
ctttcGATGCCTCCGGC.GGGGATATTNGNGNCAAGAT.GAA.ACCCATCCC.TTTCATC.TTG..CCCCAAATATCCCGGGGGGCCCGGGGGGCAGCGc.cccccgcc < 1:4585024/97‑5 (MQ=21)
cGGCCGATGCCTCCGGC.GGGGATATTTTGGGGAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..TCCCAAATATCCCCGGGGTGC..GGGGGCCGAGC.CCCcgccgc > 2:1678654/1‑98 (MQ=37)
tttcGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.GAA.ACCCATCCC.TTTCATC.TTG..CCCCAAATATCCCGGGGGGCCCGGGGGGCAGCGc.cccccgcca < 1:3044469/98‑6 (MQ=25)
ggCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGTGCAGAGC.CCCcgccgcc < 2:5988698/101‑5 (MQ=255)
ttcGATGCCTCCGGC.GGGGATATTTTGGGCAAGAT.GAA.ACCCATCCC.TTTCATC.TTT..CCCCCAATATCCCGGGGGGCC..CGGGGGGGAGCGCCCCCcgcccc > 1:4343352/3‑99 (MQ=21)
cGATGCCTCCGGC.GGGGATATTTTGGGCAAGAT.GAA.AACCCTCCC.TTTTCTC.TTG..CCCCAAAAATCCCGGGGGGCC..CGGGGGGGAGc.gcccccccccccct > 2:4841360/1‑91 (MQ=18)
aTGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACggg > 1:387912/1‑100 (MQ=255)
tGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGGGC..GGGGGCAGAGG.CCC..CGCCGCCACGGtt > 2:2214242/1‑101 (MQ=18)
ccccggggggggTTGTTGGGGACAAGAT.AAGGGGGTTTTTT.TTTTTTC..TT..CCCCAAAT.TACCGGGGGGGG..GGGGGGGCAGC.CCCCCCGCCGCCACGGTTCa < 2:6556221/93‑1 (MQ=255)
gcgcggggggGTATTTTGGGGAAAAT.ATAGGGGGGTTTT.TTTTTTT.TCT..TCCCAAAAATCGCGGGGGGGG..GGGGGGGCAGC.CCCCCCGCCGCCACGGTTCa < 2:3025894/95‑1 (MQ=255)
ggc.ggGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCAcgccg > 2:3773995/1‑101 (MQ=255)
gggggggGTTTTGGGGGAAAAAA.AAAGGGTGTTTTT.TTTTTTT.CTC..CCCCAAATTCCCCGGGGGGGG..GGGGGC.CACC.CCCCCCGCCGCCACGGTTCAcgcc < 1:2099666/98‑1 (MQ=255)
c.ggGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCcgcg > 1:271182/1‑101 (MQ=255)
ggggATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGCTCACGCCGCGa > 2:1777576/1‑101 (MQ=255)
gggATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGAc > 1:4134508/1‑101 (MQ=255)
ggATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGAcc > 2:4777677/1‑101 (MQ=255)
gATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCg > 2:3332655/1‑101 (MQ=255)
gATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGCTCACGCCGCGACCg > 2:439511/1‑101 (MQ=255)
tatTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGtc > 2:7077351/1‑101 (MQ=255)
tatTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGtc > 1:585913/1‑101 (MQ=255)
atTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGtct > 2:1452312/1‑101 (MQ=255)
tGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCg > 2:2804644/1‑101 (MQ=255)
tGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCg > 1:799538/1‑101 (MQ=255)
aaGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCg > 1:350862/1‑101 (MQ=255)
aGAT.AAAGGGTCTTTGC.TTTTATC.TTC..CCCAAAATACCCCGGGGGTGC..GGGGGCAGA.C.CCCC.CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGc < 1:4405892/101‑1 (MQ=25)
aGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGc > 1:2785758/1‑101 (MQ=255)
gAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 2:1122311/1‑101 (MQ=255)
gAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 1:1366587/1‑101 (MQ=255)
aT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 1:1536312/1‑101 (MQ=255)
aT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 2:2121171/1‑101 (MQ=255)
aT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 1:4204189/1‑101 (MQ=255)
aT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 2:2738773/1‑101 (MQ=255)
t.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAg > 1:628374/1‑101 (MQ=255)
t.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAg > 2:28872/1‑101 (MQ=255)
aaaGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgc > 1:250897/1‑101 (MQ=255)
aGGTGCTTTGC.TTTTATC.TTT..CCCCAAATATCCGGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcgc > 1:5020564/1‑101 (MQ=37)
aGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcgc > 1:1880328/1‑101 (MQ=255)
gggCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGcga > 2:681900/1‑101 (MQ=255)
|
GCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.TTT..CCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGA > NC_014034/3439692‑3439894
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 28 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|