| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,439,804 | T→C | 5.8% | intergenic (‑107/+56) | RCAP_rcc03240 ← / ← mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,439,804 | 0 | T→C | 5.8% | 21.7 ‑2.4 0.0 | 233 | intergenic (‑107/+56) | RCAP_rcc03240/mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Reads supporting (aligned to +/- strand): new base (5/9): ref base (134/85): total (139/94) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.93e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 315 total aligned reads displayed.
GACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCA > NC_014034/3439704‑3439906
|
gACCCTACACGGCGCGGCCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCtttt < 2:1895917/101‑1 (MQ=255)
gACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTGGGGGGAGAG.AAAAGGGGTTTGCtttt > 2:4502665/1‑101 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTTGGGGAAGAT.AAAAGGGCTTTGCtttttt > 2:2841439/1‑99 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTTGGGCAAGATAAAAGGGGGTTTGTttttt > 1:1618485/1‑100 (MQ=255)
accTGCACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTAt < 2:1858758/100‑1 (MQ=255)
ccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGAAGAT.AAAAGGGGTTTGGttttttt > 1:3056068/1‑98 (MQ=255)
ccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATc < 1:2991409/101‑1 (MQ=255)
cTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTGGGGCAAGAG.AAAGGGGGTTTGCTTTTAttt > 1:1909414/1‑99 (MQ=39)
cTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTagat > 1:116295/1‑98 (MQ=255)
tACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGCAGAT.AAAAGGGCTTTGCTTTTTTCtt > 1:4440987/1‑101 (MQ=255)
ccGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.cc < 2:5435566/100‑1 (MQ=255)
acGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.cc < 2:3069714/101‑1 (MQ=255)
cGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.ccc < 1:316649/101‑1 (MQ=255)
ggCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.cccc < 2:3505286/101‑1 (MQ=255)
ggCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.cccc < 2:2773400/101‑1 (MQ=255)
ggCGCAACCAGCTTGCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.cccc < 2:2609785/101‑1 (MQ=255)
gcgcGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGAATTTTGGGGAAGAT.AAAAGGGGTTTGCTTTTTTTTTT.ccccc > 1:2001622/1‑100 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCaaa < 1:4100347/101‑1 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCaaa < 1:372520/101‑1 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCaaa < 1:5407918/101‑1 (MQ=255)
cgACCAGCTTTCGAAAGACATGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAat < 1:4359064/101‑1 (MQ=255)
gACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTGGGGGAAGAT.AAAGGGGGGTTGGTTTTATCTTT.CCCCacaaa > 1:6352635/1‑97 (MQ=255)
gACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAata < 2:7098901/101‑1 (MQ=255)
aCCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAatat < 2:1019151/101‑1 (MQ=255)
cAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTGGGGCAAGAT.AAAGGGGCGTTGCTTTTTTTTTT.TCCCAAATAT.cc > 1:2877760/1‑101 (MQ=38)
cAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.cc < 2:4618377/101‑1 (MQ=255)
aGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.TCCCAAATAT.ccc > 2:4193104/1‑101 (MQ=255)
aGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.ccc < 2:6526557/101‑1 (MQ=255)
ttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGAAGAT.AAAGGGGGTTTGCTTTTTTTTTT.TCCCCAAAAT.CCCgggg > 1:6121268/1‑101 (MQ=255)
ttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCgggg < 2:2904432/101‑1 (MQ=255)
gAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTGGGGCAAGAT.AAAGGGGGTTTGCTTTTATTTTT.TCCCCAATAT.CCCggggggg > 1:6885547/1‑99 (MQ=38)
gAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCGAGAT.AAAGGGGCTTTGCTTTTATCTTT.TCCCCAATAT.CCCcgggggg > 2:6340805/1‑99 (MQ=38)
aaaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGc < 2:4368925/101‑1 (MQ=255)
aaaGACAGGAATTCGGCCTGCGGCCGATGCCTCAGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTACTTTTATCTTT.CCCCAAATAT.CCCcggggggg > 2:5247767/1‑98 (MQ=37)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..g < 1:2841541/101‑1 (MQ=255)
aGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGAATTTGGGGGAAAAT.AAAGGGGCTTTGGTTTTTTCTTT.CCCCCCAAAT.CCCgggggggggg > 1:1255659/1‑96 (MQ=255)
aGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTTTCTTT.CCCCCAATAT.CCCCGGGGGGC..GGGGGc > 1:1124096/1‑101 (MQ=37)
aGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGc < 1:6233208/101‑1 (MQ=255)
ggAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGCAAGAT.AAAGGGGGTTTGCTTTTATCTTT.CCCCCAATAT.CCCGGGGGGGG..ggggggg > 1:679386/1‑99 (MQ=37)
gAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCCAATAT.CCCGGGGGTGC..GGGGGGag > 2:7004615/1‑101 (MQ=37)
cGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTTGGGGAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGccc > 2:76352/1‑101 (MQ=255)
cGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGccc < 1:259569/101‑1 (MQ=255)
gCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGccccc < 1:4556567/101‑1 (MQ=255)
gCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGccccc < 1:882130/101‑1 (MQ=255)
ccTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCCcg < 2:1258793/101‑1 (MQ=255)
tgactttcGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAA.ACCCATCCCTTTCATCTTG.CCCCAAATAT.CCCGGGGGGCCCGGGGGGCAGCGcccccc < 1:2135005/94‑2 (MQ=25)
tgactttcGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAA.ACCCATCCCTTTCATCTTG.CCCCAAATAT.CCCGGGGGGCCCGGGGGGCAGCGcccccc < 2:5759785/94‑2 (MQ=25)
cTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCCcgc > 2:4124060/1‑101 (MQ=255)
cGGCCGATGCCTCCGGCGGGGATATTTTGGGGAAGAT.AAAGGGGCTTTGCTTTTATCTTT.TCCCAAATAT.CCCCGGGGTGC..GGGGGCCGAGCCCCcgccgc > 2:1678654/1‑98 (MQ=37)
cGGCCGATGCCTCCGGCGGGGATATTTGGGGCCAGAT.AAAGGGGCTTTGGTTTTATCTTT.TCCCCAATAT.CCCGGGGGTGG..GGGGGCCGAGGCCCcgccgc > 2:1787442/1‑98 (MQ=37)
tttcGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAA.AACCATCCCTTTCATCTTG.CCCCAAATATCCCCGGGGGCCCG.GGGGGCAGCGccccccgccc > 2:5496352/4‑96 (MQ=21)
tttcGATGCCTCAGGCGGGGATATTTGGGGCAAGAT.GAA.ACCCATCCCTTTCATCTTG.CCCCAAATAT.CCCGGGGGGCCCGGGGGGCAGCGccccccccca > 2:2718379/4‑96 (MQ=21)
ggCCGATGCCTCCGGCGGGGATATTTTGGGGAAGAT.AAAGGGGCTTTGCTTTTTTCTTT.CCCCCAATAT.CCCGGGGGGGC..GGGGGCAGAGccccccccgcc > 1:5891818/1‑95 (MQ=21)
ggCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGTGCAGAGCCCCcgccgcc < 2:5988698/101‑5 (MQ=255)
gCCGATGCCTCCGGCGGGGATATTTTGGGGAAAAT.AAAAGGGGTTTGCTTTTTTTTTTCCCCCAAAAAC.CCCGGGGGGGG..GGGGGCGGAGccccccccgcc > 2:4715367/1‑95 (MQ=255)
aTGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAA.ACCCATCCCTTTCATCTTG.CCCCAAATAT.CCCGGGGGGCCCGGGGGGCAGGGccccccgccacctcc > 2:3815895/1‑91 (MQ=21)
aTGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACggg > 1:387912/1‑100 (MQ=255)
ccGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGGTCAcgc > 2:5837980/1‑101 (MQ=255)
ggcggGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGGGC..GGGGGCAGAGCCCC..CGCCGCCACGGGTCAccccg > 1:5523315/1‑101 (MQ=18)
cggGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCcgcg > 1:271182/1‑101 (MQ=255)
ggggATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGa > 1:2743845/1‑101 (MQ=255)
gggATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGAc > 1:4134508/1‑101 (MQ=255)
ggATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGAcc > 2:4834090/1‑101 (MQ=255)
atTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGtct > 2:672834/1‑101 (MQ=255)
ttGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTcc > 1:5772179/1‑101 (MQ=255)
tGGGGCAAGAT.ACAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCg > 1:6318477/1‑101 (MQ=255)
tGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCg > 1:799538/1‑101 (MQ=255)
cAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTc > 1:6595071/1‑101 (MQ=255)
aGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGc > 2:1436274/1‑101 (MQ=255)
gAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 2:1122311/1‑101 (MQ=255)
gAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 2:1595707/1‑101 (MQ=255)
gAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 1:1366587/1‑101 (MQ=255)
aT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 2:1473301/1‑101 (MQ=255)
aT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 2:2121171/1‑101 (MQ=255)
aT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 1:1536312/1‑101 (MQ=255)
aT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 1:4204189/1‑101 (MQ=255)
aT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGCCGccg > 1:5200695/1‑100 (MQ=25)
t.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAg > 2:3723575/1‑101 (MQ=255)
aaaGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgc > 2:3420106/1‑101 (MQ=255)
aaaGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgc > 1:3318609/1‑101 (MQ=255)
aaGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcg > 1:4933775/1‑101 (MQ=255)
aGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcgc > 1:1880328/1‑101 (MQ=255)
aGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcgc > 1:4331871/1‑101 (MQ=255)
aGGGGCTCTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcgc > 2:443185/1‑101 (MQ=255)
ggggCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGcgcg > 1:4621381/1‑101 (MQ=255)
gggCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGcga > 2:681900/1‑101 (MQ=255)
ctttgctttTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGcgacga > 2:2499272/1‑101 (MQ=255)
ttgctttTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGata > 1:3197614/1‑101 (MQ=255)
ttgctttTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGata > 1:2329643/1‑101 (MQ=255)
gctttTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATc > 1:6395153/1‑101 (MQ=255)
gctttTATCTTT.CCCCAAATAT.CCCGGGGGCGC..GGGGGCCGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGCCGCCAGCGCGACGATATc > 1:6052219/1‑101 (MQ=37)
gctttTATCATT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATc > 1:1040084/1‑101 (MQ=255)
ctttTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATcc > 2:1363926/1‑101 (MQ=255)
ttttATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCca > 1:352518/1‑101 (MQ=255)
ttttATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCca > 1:2093509/1‑101 (MQ=255)
tttATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcat > 2:4859960/1‑101 (MQ=255)
ttATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTNTCCGGGGTCGCCAGCGCGACGATATCcatc > 1:706427/1‑101 (MQ=255)
ttATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcatc > 2:6141186/1‑101 (MQ=255)
ttATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcatc > 2:2239371/1‑101 (MQ=255)
tATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcatca > 2:5084918/1‑101 (MQ=255)
|
GACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGCTTTTATCTTT.CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCA > NC_014034/3439704‑3439906
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 29 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|