| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,461,382 | C→A | 95.4% | intergenic (‑92/+38) | RCAP_rcc03260 ← / ← RCAP_rcc03261 | NAD‑dependent epimerase/dehydratase/TOBE domain‑containing protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,461,382 | 0 | C→A | 95.4% | 13.9 ‑3.8 ‑0.1 | 172 | intergenic (‑92/+38) | RCAP_rcc03260/RCAP_rcc03261 | NAD‑dependent epimerase/dehydratase/TOBE domain‑containing protein |
| Reads supporting (aligned to +/- strand): new base (70/94): ref base (7/1): total (77/95) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.30e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.73e-01 | ||||||||||
Only 100 of 230 total aligned reads displayed.
TCTTTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGG.GCAGCCGACCCCACCGGGCCGC.CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATCGCG > NC_014034/3461283‑3461462
|
tCTTTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGcc < 2:6015553/101‑1 (MQ=255)
cTTTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGcca > 2:791956/1‑100 (MQ=255)
cTTTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGcca > 2:2910379/1‑100 (MQ=255)
cTTTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGcca > 1:2361536/1‑100 (MQ=255)
tttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccac > 1:5528762/1‑99 (MQ=255)
tttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccac > 1:674834/1‑99 (MQ=255)
tttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccac < 2:2629072/101‑3 (MQ=255)
tttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccac < 2:4148683/101‑3 (MQ=255)
tttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccac > 2:5043340/1‑99 (MQ=255)
tttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccac > 2:69823/1‑99 (MQ=255)
ttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAG.GGGGGCGCAGCCgcc > 2:5719136/1‑99 (MQ=255)
ttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacc > 1:3946346/1‑98 (MQ=255)
ttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacc > 1:3860544/1‑98 (MQ=255)
ttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacc > 2:1763409/1‑98 (MQ=255)
ttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacc < 2:4038575/101‑4 (MQ=255)
ttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacc > 2:3589900/1‑98 (MQ=255)
ttCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacc > 1:3127714/1‑98 (MQ=255)
tCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccaccc > 2:6072025/1‑97 (MQ=255)
tCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccaccc > 2:4333917/1‑97 (MQ=255)
tCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccaccc > 1:1173602/1‑97 (MQ=255)
tCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTCGCGCAGGGCCAAAGGAA.GGGGGCGCAGccaccc < 1:5015684/101‑5 (MQ=255)
cATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacccg < 2:318453/101‑6 (MQ=255)
aTCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacccgg > 2:5586517/1‑95 (MQ=255)
cGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacccggcc > 1:2851609/1‑93 (MQ=255)
gCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacccggccg < 1:791980/101‑10 (MQ=255)
cAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacccggccgc > 1:4359736/1‑91 (MQ=255)
cAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacccggccgc > 1:4033322/1‑91 (MQ=255)
cAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacccggccgc > 1:1565096/1‑91 (MQ=255)
cAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacccggccgc > 2:2941067/1‑91 (MQ=255)
cAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGCGCAGccacccggccgc > 2:5286376/1‑91 (MQ=255)
aCCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCg > 2:1148531/1‑101 (MQ=255)
cccGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGt > 2:3447805/1‑101 (MQ=255)
ccGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGtt < 2:5360239/101‑1 (MQ=255)
cGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTc < 1:1006535/101‑1 (MQ=255)
cGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTc > 1:2950459/1‑101 (MQ=255)
gCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCg < 1:6072337/101‑1 (MQ=255)
cAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGa < 2:4933588/101‑1 (MQ=255)
ggCTTAGCAGGCTGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG.CCCC.CC.GGCCGCGCCCCCAACCCCGGTCGTTCGAt < 1:4503283/100‑1 (MQ=255)
gCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATc > 2:615219/1‑101 (MQ=255)
cTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAATGGGGC.GCAGCC.ACCCGGCCG...CGC.CCCCC.ACCCCGGCCGTTCGATCa > 2:5835327/1‑101 (MQ=255)
cTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCa < 1:2536688/101‑1 (MQ=255)
ttAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAg < 2:2873463/101‑1 (MQ=255)
tAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTTGATCAGt < 2:674081/101‑1 (MQ=255)
aGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGtt > 2:7131720/1‑101 (MQ=255)
aGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGtt > 2:3375971/1‑101 (MQ=255)
aGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGtt > 1:352481/1‑101 (MQ=255)
gCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTc > 2:2062869/1‑101 (MQ=255)
gCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTc > 1:540099/1‑101 (MQ=255)
gCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTc > 1:929777/1‑101 (MQ=255)
aGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGGTGCAGCC.ACCCGGCCG...CG..CCCCCAACCCCGGTCGTTCGATCAGTTCtt < 2:2071850/101‑1 (MQ=255)
aGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCtt > 1:1607054/1‑101 (MQ=255)
aGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCtt < 2:5118608/101‑1 (MQ=255)
aGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCtt > 2:3856584/1‑101 (MQ=255)
ggATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTg > 1:1439848/1‑101 (MQ=255)
ggATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTg < 1:5843829/101‑1 (MQ=255)
ggATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTg > 2:582465/1‑101 (MQ=255)
gATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGc > 2:5862634/1‑101 (MQ=255)
gATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGc > 2:2195819/1‑101 (MQ=255)
gATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGc < 2:3946171/101‑1 (MQ=255)
aTGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGcc < 2:1732466/101‑1 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg < 2:778454/101‑1 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg > 1:5552397/1‑101 (MQ=255)
tGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg < 2:266706/101‑1 (MQ=255)
gatctgggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcg < 2:1208345/96‑1 (MQ=255)
cACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcgac < 1:756845/101‑1 (MQ=255)
cACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcgac < 1:5879924/101‑1 (MQ=255)
gggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCcgagatc > 1:1208393/1‑97 (MQ=255)
gggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGAt < 2:1852444/101‑1 (MQ=255)
ggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATg < 1:6702441/101‑1 (MQ=255)
ggCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATg < 1:2113717/101‑1 (MQ=255)
gcgcGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGa < 1:2730339/101‑1 (MQ=255)
cgcgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGAc < 1:6340557/101‑1 (MQ=255)
cgcgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGAc < 2:1898078/101‑1 (MQ=255)
cgcgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGAc > 2:2541523/1‑101 (MQ=255)
cgcgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGAc < 2:4677862/101‑1 (MQ=255)
cgGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGt > 1:5653880/1‑101 (MQ=255)
ggCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTc > 2:6270836/1‑101 (MQ=255)
ggCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTc < 1:2125375/101‑1 (MQ=255)
ggCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTc < 2:3697413/101‑1 (MQ=255)
ggCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTc > 1:1762156/1‑101 (MQ=255)
ggCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTc < 1:6622364/101‑1 (MQ=255)
ccAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCag > 1:1657789/1‑101 (MQ=255)
cAGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCaga > 1:3553844/1‑101 (MQ=255)
aGACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCagag > 1:263801/1‑101 (MQ=255)
gACGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGCTGACGTCAGAgg > 2:1484072/1‑101 (MQ=255)
aCGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAGCCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGc < 1:3601981/101‑1 (MQ=255)
cGCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGcc < 1:1523597/101‑1 (MQ=255)
gCAGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCt > 2:6556905/1‑101 (MQ=255)
aGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtg > 2:4648476/1‑101 (MQ=255)
aGTTTGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtg < 1:5265569/101‑1 (MQ=255)
tttGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtgat < 1:2013702/101‑1 (MQ=255)
tttGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtgat > 1:5341571/1‑101 (MQ=255)
tGGCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTtgatga < 1:1913196/101‑1 (MQ=255)
ggCGCAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTgatgat < 2:4219351/101‑1 (MQ=255)
gcgcAGGGCCAAAGGAA.GGGGGCGCAGCC.ACCCGGCCG...CG..CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATc > 2:3422676/1‑101 (MQ=255)
cgcAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcg < 2:3612870/101‑1 (MQ=255)
gcAGGGCCAAAGGAA..GGGG.GC.GCAG...CCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCCGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcgc > 1:4719619/1‑101 (MQ=255)
cAGGGCCAAAGGAA.GGGGGCGCAGCC.ACCCGGCCG...CG..CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcgcg > 2:3879410/1‑101 (MQ=255)
cAGGGCCAAAGGAA.GGGGGCGCAGCC.ACCCGGCCG...CG..CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcgcg > 2:5526474/1‑101 (MQ=255)
cAGGGCCAAAGGAA.GGGGGCGCAGCC.ACCCGGCCG...CG..CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATcgcg > 1:3486827/1‑101 (MQ=255)
|
TCTTTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAA.GGGGG.GCAGCCGACCCCACCGGGCCGC.CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATCGCG > NC_014034/3461283‑3461462
Base quality scores:
ATCG
< 3 ≤
ATCG
< 23 ≤
ATCG
< 31 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|