| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 580,953 | A→G | 1.4% | intergenic (+74/‑297) | RCAP_rcc00541 → / → RCAP_rcc00542 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 580,953 | 0 | A→G | 1.4% | 2.3 ‑1.0 ‑0.5 | 342 | intergenic (+74/‑297) | RCAP_rcc00541/RCAP_rcc00542 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (1/4): ref base (167/170): total (168/174) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.72e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.43e-01 | ||||||||||
Only 100 of 376 total aligned reads displayed.
CGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAT.AACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAAC > NC_014034/580853‑581049
|
cgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGa < 2:3787152/101‑1 (MQ=255)
gTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAt < 1:5576174/101‑1 (MQ=255)
tGACAAGGTGTTCCGTCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGAGCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAT.a < 1:1207195/101‑1 (MQ=255)
tGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGGTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGGTATTTGAGGCAAGAT.a > 1:5990318/1‑101 (MQ=255)
tGACAAGGTGGTCCGCCTCGATTGAGGGTGCGCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAT.a < 1:5712572/101‑1 (MQ=21)
gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCGAGAT.aa < 2:1630989/101‑1 (MQ=255)
gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAACTCA.CCCCCCGGATATTTGAGGCAAGAT.aa > 2:4328333/1‑101 (MQ=255)
aCAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAT.aaa > 2:3076493/1‑100 (MQ=255)
cAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAT.aaac < 1:1063741/101‑3 (MQ=255)
cAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAT.aaac < 1:218761/101‑3 (MQ=255)
caGGTGTTCCGGCGCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAT.aaacg < 2:3314585/100‑4 (MQ=255)
aaGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAT.aaacg > 2:622178/1‑98 (MQ=255)
ggTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAT.aaacggg < 1:45868/101‑6 (MQ=255)
ggTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAT.aaaaggg > 2:1329088/1‑96 (MQ=255)
gtgtTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGgc > 2:5887325/1‑101 (MQ=255)
tCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGGGGCGCCCCCCCTTTTTGCTTGGCCGGAAATTA.CCCCCCGGGTAATTGAAGGAAAATAAACGGGGGccc > 2:4505999/1‑100 (MQ=255)
tCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCt > 2:3734754/1‑101 (MQ=255)
ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTa > 2:4784664/1‑101 (MQ=255)
ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTa > 1:979333/1‑101 (MQ=255)
ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTa < 1:4877763/101‑1 (MQ=255)
cGCCTCGATTGATGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAt < 1:7045306/101‑1 (MQ=255)
cGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAt < 1:1722675/101‑1 (MQ=255)
gCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.c < 1:3672500/101‑1 (MQ=255)
ccTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGGGCCTAT.Ca > 1:3899497/1‑101 (MQ=255)
cTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CAc < 1:424205/101‑1 (MQ=255)
cGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCt < 1:5835862/101‑1 (MQ=255)
cGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCt < 2:513213/101‑1 (MQ=255)
cttGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTg < 1:5467036/100‑1 (MQ=255)
gAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGGAAGATAAACGGGCGCCTAT.CACCTTGGTg > 2:6980977/1‑101 (MQ=255)
gAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTg < 1:3156221/101‑1 (MQ=255)
ggcggcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.GACCTTGGGGCa > 2:2293310/1‑101 (MQ=21)
ggcggcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCa < 2:6442237/101‑1 (MQ=255)
ggcCCGGGCAGGGGGCGCTGCCCCCTCTTTTGGCCGCGCCGGAATTCA.CCCCCCGGGTATTTTAGGCAAGATAAACGGGCGCCGATCCACCTTGGGCCaaa > 2:2390877/1‑101 (MQ=12)
gcCCGGGCAGGGGGCGCCTCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAata < 1:6923490/101‑1 (MQ=25)
cccGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.AACCTTGGTGCAAatat > 1:6571676/1‑101 (MQ=255)
cGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATcc < 2:6014510/101‑1 (MQ=255)
cGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATcc > 2:5627213/1‑101 (MQ=255)
gggCCGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCg < 1:4073559/101‑1 (MQ=255)
gggCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCg < 2:1832939/101‑1 (MQ=255)
ggCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCgg < 1:6086612/101‑1 (MQ=255)
ggCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCgg < 2:6859292/101‑1 (MQ=255)
cAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCgggg > 2:6537501/1‑101 (MQ=255)
cAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCgggg > 2:5778704/1‑101 (MQ=255)
aGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTTA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCggggg > 2:2562381/1‑101 (MQ=255)
aGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCggggg > 2:2361426/1‑101 (MQ=255)
aGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCggggg > 1:2844342/1‑101 (MQ=255)
ggggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCggggggg > 1:725369/1‑100 (MQ=255)
gggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTg < 1:5738909/101‑1 (MQ=255)
ggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGa < 1:152622/101‑1 (MQ=255)
tGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCg < 1:6218052/101‑1 (MQ=255)
tGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCg < 2:3544788/101‑1 (MQ=255)
gCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGa > 1:4790972/1‑101 (MQ=255)
cccccTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGaa < 1:872895/101‑1 (MQ=255)
cccccTCTTTCGGCTGCGCCGAAATTCA.CCCCCCGGGTATTTGAGGCAAGATAAACGGGCGCCTAT.CATCTTGGTGCAAATATCCGGGGGGGGAGGCCGaa > 2:5256342/1‑101 (MQ=37)
ccccTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CGCCTTGGTGCAAATATCCGGGGGGTGAGGCCGaaa < 1:4506238/101‑1 (MQ=255)
ccccTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGaaa < 1:1696471/101‑1 (MQ=255)
cccTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAg > 2:533432/1‑101 (MQ=255)
ccTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGc > 1:2715585/1‑101 (MQ=255)
ctctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGcc < 1:4925462/101‑1 (MQ=255)
tctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCg < 2:6617835/101‑1 (MQ=255)
tctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCg > 1:1321492/1‑101 (MQ=255)
tctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGGGAGGCCGAAAGCCg > 2:2744974/1‑101 (MQ=255)
tttCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAg < 2:4605267/101‑1 (MQ=255)
ttCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAgg < 1:767829/101‑1 (MQ=255)
cGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAgggg > 1:5642229/1‑101 (MQ=255)
gCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGCGGTGAGGCCGAAAGCCGAGGGGGc < 2:3404812/101‑1 (MQ=255)
cTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCa < 2:6669094/101‑1 (MQ=255)
cttcggccaaTTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGATGGGGTT.TATCTTGCCGCAAATATCCCGGGGGTGAGG.CG.AAGCCGAGGGGGCAgc > 1:5097686/9‑101 (MQ=25)
gcgcCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAgc < 1:3734904/101‑1 (MQ=255)
tcggccaaTTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGATGGGGTT.TATCTTGCCCCAAATATCCCGGGGGTGAGG.CG.AAGCCGAGGGGGCAgcgc < 2:7075430/95‑1 (MQ=37)
tcggccaaTTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGATGGGGTT.TATCTTGCCCCAAATATCCCGGGGGTGAGG.CG.AAGCCGAGGGGGCAgcgc < 2:6141742/95‑1 (MQ=37)
gAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGcccc > 1:5348592/1‑101 (MQ=255)
gAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGcccc > 2:2171349/1‑101 (MQ=255)
aaaTTCC.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccccc < 1:350837/101‑1 (MQ=255)
aaaTTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccccc > 1:2130001/1‑101 (MQ=255)
aaTTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCt < 2:776984/101‑1 (MQ=255)
aTTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtt < 2:2628750/101‑1 (MQ=255)
ttCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCttt > 2:1192852/1‑101 (MQ=255)
ttCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCttt > 2:1759325/1‑101 (MQ=255)
tCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt > 2:6700321/1‑101 (MQ=255)
cA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTc > 1:6455480/1‑101 (MQ=255)
a.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTcc > 2:650343/1‑101 (MQ=255)
cGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtcg > 2:1913376/1‑101 (MQ=255)
gggATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtcgt > 2:3833162/1‑101 (MQ=255)
gggATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtcgt > 2:2934947/1‑101 (MQ=255)
ggATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtg > 1:2402861/1‑101 (MQ=255)
ggATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtg > 2:2093089/1‑101 (MQ=255)
gATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtgt < 1:6873609/101‑1 (MQ=255)
atatTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGtgtg > 1:3823803/1‑101 (MQ=255)
tatTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTgg < 2:5073985/101‑1 (MQ=255)
tatTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTgg > 2:4216908/1‑101 (MQ=255)
tatTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTgg > 1:1906260/1‑101 (MQ=255)
atTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGTGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGa > 1:3412900/1‑101 (MQ=255)
atTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGa > 2:149602/1‑101 (MQ=255)
atTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGa > 1:5255085/1‑101 (MQ=255)
ttGAGGCAATATAAACGGGCGCCTAT.CGCCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc < 2:866112/101‑1 (MQ=37)
tGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATcg > 2:5481420/1‑101 (MQ=255)
tGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATcg > 2:3954175/1‑101 (MQ=255)
tGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATcg < 2:2706469/101‑1 (MQ=255)
cAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCaa > 1:3251101/1‑101 (MQ=255)
|
CGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAT.AACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAAC > NC_014034/580853‑581049
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|