| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 580,966 | A→T | 1.4% | intergenic (+87/‑284) | RCAP_rcc00541 → / → RCAP_rcc00542 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 580,966 | 0 | A→T | 1.4% | 4.2 ‑1.7 ‑0.0 | 367 | intergenic (+87/‑284) | RCAP_rcc00541/RCAP_rcc00542 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (1/4): ref base (194/167): total (195/172) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.89e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.25e-01 | ||||||||||
Only 100 of 400 total aligned reads displayed.
CCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAT.AACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTCT > NC_014034/580867‑581066
|
cGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAt < 1:1722675/101‑1 (MQ=255)
gCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.c < 2:651121/101‑1 (MQ=255)
gCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.c < 1:3672500/101‑1 (MQ=255)
ccTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.Ca < 2:585674/101‑1 (MQ=255)
cGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCt > 1:7057443/1‑101 (MQ=255)
cGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCt < 1:4047102/101‑1 (MQ=255)
gATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCtt > 1:1973630/1‑101 (MQ=255)
cttGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTg < 1:5467036/100‑1 (MQ=255)
aTTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTTGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAAAGGGCGCCTAT.CACCTTg > 2:150335/1‑101 (MQ=21)
ttGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTgg > 2:5538234/1‑101 (MQ=255)
ggcCCGGGCAGGGGGCGCTGCCCCCTCTTTTGGCCGCGCCGGAATTCA.CCCCCCGGGTATTTTAGGCAAGATAAACGGGCGCCGATCCACCTTGGGCCaaa > 2:2390877/1‑101 (MQ=12)
cccGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAatat < 2:446895/101‑1 (MQ=255)
ccGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATc < 2:3031470/101‑1 (MQ=255)
gCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCggg > 2:3220216/1‑101 (MQ=255)
aGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCggggg < 2:7001257/101‑1 (MQ=255)
gggggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCgggggg > 2:4257454/1‑101 (MQ=255)
ggggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCggggggg > 2:6021891/1‑100 (MQ=255)
gggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTg < 1:5807641/101‑1 (MQ=255)
gggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTg < 2:7088240/101‑1 (MQ=255)
gggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGGGCAAATATACGGGGGGTg > 1:3833726/1‑101 (MQ=25)
ggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGa < 1:152622/101‑1 (MQ=255)
tGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCg > 1:4175412/1‑101 (MQ=255)
gCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGa < 1:6053294/101‑1 (MQ=255)
cccccTCTTTCGGCTGCGCCGAAATTCA.CCCCCCGGGTATTTGAGGCAAGATAAACGGGCGCCTAT.CATCTTGGTGCAAATATCCGGGGGGGGAGGCCGaa > 2:5256342/1‑101 (MQ=37)
ccccTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CGCCTTGGTGCAAATATCCGGGGGGTGAGGCCGaaa < 1:4506238/101‑1 (MQ=255)
ccccTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGaaa < 1:6522080/101‑1 (MQ=255)
ccTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGc > 1:2715585/1‑101 (MQ=255)
ctctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGcc < 1:4925462/101‑1 (MQ=255)
tctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCg > 1:725394/1‑101 (MQ=255)
ctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGa > 2:5948744/1‑101 (MQ=255)
tttCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAg < 2:4605267/101‑1 (MQ=255)
ttCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.TACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAgg < 2:3461487/101‑1 (MQ=255)
cGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAgggg > 1:5642229/1‑101 (MQ=255)
gCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGc < 1:4437119/101‑1 (MQ=255)
gCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGc < 1:3765362/101‑1 (MQ=255)
cTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCa < 2:6669094/101‑1 (MQ=255)
cTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCa > 2:2332169/1‑101 (MQ=255)
tGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAg > 2:1011600/1‑101 (MQ=255)
tGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAg < 1:3904287/101‑1 (MQ=255)
tcggccaaTTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGATGGGGTT.TATCTTGCCCCAAATATCCCGGGGGTGAGG.CG.AAGCCGAGGGGGCAgcgc < 2:6141742/95‑1 (MQ=37)
cgcCGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAgcg > 2:2697472/1‑101 (MQ=255)
cGAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccc < 2:2884903/101‑1 (MQ=255)
gAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGcccc > 2:2171349/1‑101 (MQ=255)
gAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGcccc < 1:571482/101‑1 (MQ=255)
gAAATTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGcccc > 1:5348592/1‑101 (MQ=255)
aaaTTCC.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccccc < 1:350837/101‑1 (MQ=255)
aaaTTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccccc > 1:4747355/1‑101 (MQ=255)
aaaTTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccccc < 2:1973558/101‑1 (MQ=255)
aTTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtt > 2:6333016/1‑101 (MQ=255)
aTTCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtt > 2:5351818/1‑101 (MQ=255)
ttCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCttt > 2:1192852/1‑101 (MQ=255)
tCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt < 1:1656683/101‑1 (MQ=255)
tCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt < 2:2744305/101‑1 (MQ=255)
tCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt > 2:6700321/1‑101 (MQ=255)
tCA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt < 1:3154273/101‑1 (MQ=255)
cA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTc > 2:484115/1‑101 (MQ=255)
cA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTc < 1:6231219/101‑1 (MQ=255)
cA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTc > 1:6455480/1‑101 (MQ=255)
a.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTcc > 2:1844263/1‑101 (MQ=255)
cccccGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTccc < 2:2569389/101‑1 (MQ=255)
cccgGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcg < 1:2153540/101‑1 (MQ=255)
ccGGGATATTTGAGGCAAGATAAACGGGCGCCTAT.CACTTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtc < 2:6950961/101‑1 (MQ=255)
gggATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtcgt > 2:3833162/1‑101 (MQ=255)
ggATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtg > 1:1301125/1‑101 (MQ=255)
gATATTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtgt < 1:6873609/101‑1 (MQ=255)
atatTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGtgtg > 1:5576897/1‑101 (MQ=255)
atatTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGtgtg < 2:760988/101‑1 (MQ=255)
tatTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTgg < 2:5073985/101‑1 (MQ=255)
atTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGTGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGa > 1:4858302/1‑101 (MQ=255)
atTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGa > 2:3360638/1‑101 (MQ=255)
atTTGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGa > 2:3570718/1‑101 (MQ=255)
tttGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGAt < 1:1841456/101‑1 (MQ=255)
ttGAGGCAATATAAACGGGCGCCTAT.CGCCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc < 2:866112/101‑1 (MQ=37)
ttGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc < 2:5641939/101‑1 (MQ=255)
ttGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc < 2:4175217/101‑1 (MQ=255)
tGAGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATcg > 1:1137151/1‑101 (MQ=255)
aGGCAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATcgcg > 1:788099/1‑101 (MQ=255)
cAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCaa > 2:6445807/1‑101 (MQ=255)
cAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCaa > 2:1768587/1‑101 (MQ=255)
cAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCaa > 1:931488/1‑101 (MQ=255)
cAAGATAAACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCCCGCaa > 2:378207/1‑101 (MQ=255)
agataaaCGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACg < 1:6700663/96‑1 (MQ=255)
gataaaCGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGt < 1:3419831/97‑1 (MQ=255)
taaaCGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTc < 1:331282/99‑1 (MQ=255)
taaaCGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTc > 2:6593646/3‑101 (MQ=255)
taaaCGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTc > 2:5145432/3‑101 (MQ=255)
taaaCGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTc < 2:3905731/99‑1 (MQ=255)
taaaCGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGAGCGCGCAACGTTc < 1:5140580/99‑1 (MQ=255)
aaaCGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCa > 2:2115732/2‑101 (MQ=255)
aaaCGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCa < 1:4550983/100‑1 (MQ=255)
aaCGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAg > 1:5261185/1‑101 (MQ=255)
aaCGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAg < 1:2390971/101‑1 (MQ=255)
gggCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCg > 2:2531015/1‑101 (MQ=255)
gggCGCCTAT.CAACTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCg > 2:1367999/1‑101 (MQ=255)
gcgcCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGa > 1:5877550/1‑101 (MQ=255)
ccTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAttt < 2:228530/101‑1 (MQ=255)
tAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTtc < 1:2608601/101‑1 (MQ=255)
aT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTtct < 1:695896/101‑1 (MQ=255)
aT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTtct > 1:6204232/1‑101 (MQ=255)
aT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTtct > 2:6836939/1‑101 (MQ=255)
|
CCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAGAT.AACGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTCT > NC_014034/580867‑581066
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|