| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 580,975 | G→C | 1.3% | intergenic (+96/‑275) | RCAP_rcc00541 → / → RCAP_rcc00542 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 580,975 | 0 | G→C | 1.3% | 2.3 ‑1.7 ‑0.5 | 379 | intergenic (+96/‑275) | RCAP_rcc00541/RCAP_rcc00542 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (1/4): ref base (200/174): total (201/178) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.91e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.14e-01 | ||||||||||
Only 100 of 400 total aligned reads displayed.
TTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.AT.AA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTCTCCCTGCGGC > NC_014034/580876‑581075
|
tGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGt > 1:1233927/1‑101 (MQ=255)
gAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGGAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTg > 2:6980977/1‑101 (MQ=255)
gAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTgggg > 2:3803798/1‑99 (MQ=255)
gAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTg > 2:5186145/1‑101 (MQ=255)
gcggcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCaa < 1:6656496/101‑1 (MQ=255)
ggcCCGGGCAGGGGGCGGTGCCCCCTCTTTCGGCTGCGCCGAAATTTA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGGGCCTAT.GACCTTTGTGCaaaa > 2:5606578/1‑100 (MQ=21)
ggcCCGGGCAGGGGGCGCTGCCCCCTCTTTTGGCCGCGCCGGAATTCA.CCCCCCGGGTATTTTAGGCAAG.ATAAA.CGGGCGCCGATCCACCTTGGGCCaaa > 2:2390877/1‑101 (MQ=12)
gcCCGGGCAGGGGGCGCCTCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAata < 1:6923490/101‑1 (MQ=25)
ccGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATc < 2:3031470/101‑1 (MQ=255)
cgtgcggggggCGCTTCCCCCTCTTTCGGCTTCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATcc < 2:5401593/95‑1 (MQ=21)
gggCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCg < 1:852751/101‑1 (MQ=255)
ggCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCgg < 2:6859292/101‑1 (MQ=255)
gCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCggg > 2:3220216/1‑101 (MQ=255)
cAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCgggg > 2:5778704/1‑101 (MQ=255)
aGGGGGCGCTGCGCCCTCTTTCGGCTGCGCCGAAATTCA.CCGCCCCGATACTTGAGGCAAGTAA.AA.CGGGCGCCTAT.CGTCTTGATGCGAATATCCggggg > 1:7074644/1‑101 (MQ=255)
ggggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCggggggg > 2:6021891/1‑100 (MQ=255)
gggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTg < 1:5738909/101‑1 (MQ=255)
gcgcTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAg < 1:1535487/101‑1 (MQ=255)
cgcTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTGT.CACCTTGGTGCAAATATCCGGGGGGTGAgg < 1:4664209/101‑1 (MQ=255)
cgcTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAgg < 2:6687152/101‑1 (MQ=255)
gcTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGc > 1:2706571/1‑101 (MQ=255)
gCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGa > 1:4790972/1‑101 (MQ=255)
ccccTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGaaa > 2:350093/1‑101 (MQ=255)
ccccTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGaaa < 1:1696471/101‑1 (MQ=255)
ctctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGcc < 2:4279595/101‑1 (MQ=255)
tctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCg < 2:6617835/101‑1 (MQ=255)
tctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCg < 2:1911457/101‑1 (MQ=255)
tctTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCg < 2:3722473/101‑1 (MQ=255)
tttCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAg < 2:4605267/101‑1 (MQ=255)
tCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAggg > 1:5502358/1‑101 (MQ=255)
tCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAggg > 1:764882/1‑101 (MQ=255)
gCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGCGGTGAGGCCGAAAGCCGAGGGGGc < 2:3404812/101‑1 (MQ=255)
cTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCa > 2:2332169/1‑101 (MQ=255)
tGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAg < 1:342727/101‑1 (MQ=255)
tGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAg < 1:3904287/101‑1 (MQ=255)
cttcggccaaTTCACCCCCCGGGATATTTGCGGCAAG.GTGAA.AGGATGGGGTT.TATCTTGCCCCAAATATCCCGGGGGTGAGG.CG.AAGCCGAGGGGGCAgc < 1:2145794/93‑1 (MQ=37)
ttcggccaaTTCACCCCCCGGGATATTTGCGGCAAG.GTGAA.AGGATGGGGTT.TATCTTGCCCCAAATATCCCGGGGGTGAGG.CG.AAGCCGAGGGGGCAgcg < 1:2202565/94‑1 (MQ=37)
gcgcCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAgc < 1:3734904/101‑1 (MQ=255)
tcggccaaTTCACCCCCCGGGATATTTGCGGCAAG.GTGAA.AGGATGGGGTT.TATCTTGCCCCAAATATCCCGGGGGTGAGG.CG.AAGCCGAGGGGGCAgcgc < 2:6141742/95‑1 (MQ=37)
cgcCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAgcg > 2:2697472/1‑101 (MQ=255)
cGAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccc < 2:2884903/101‑1 (MQ=255)
gAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGcccc > 1:4880069/1‑101 (MQ=255)
gAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGcccc < 2:3833563/101‑1 (MQ=255)
gAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGcccc > 2:2171349/1‑101 (MQ=255)
gAAATTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGcccc > 2:181340/1‑101 (MQ=255)
aaaTTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccccc < 2:1973558/101‑1 (MQ=255)
aaTTCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCt < 2:776984/101‑1 (MQ=255)
tCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt < 2:2744305/101‑1 (MQ=255)
tCA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt > 1:5688527/1‑101 (MQ=255)
cA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTc < 1:6231219/101‑1 (MQ=255)
cA.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATACGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTc > 2:5256997/1‑101 (MQ=255)
a.CCCCCGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTcc > 2:650343/1‑101 (MQ=255)
ccccccGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTcc < 2:6412295/100‑1 (MQ=255)
cccccGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTccc < 2:2569389/101‑1 (MQ=255)
cccGGGATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgt < 1:533444/101‑1 (MQ=255)
gggATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtcgt > 1:96897/1‑101 (MQ=255)
ggATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtg > 1:2402861/1‑101 (MQ=255)
gagatTTGAGGCAAG.AA.AATCGGGCGCCTAT.CCCCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtgt < 2:7074270/98‑1 (MQ=37)
gATATTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtgg > 2:1040747/1‑100 (MQ=255)
atatTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGtgtg > 1:3823803/1‑101 (MQ=255)
tatTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTgg < 1:3220332/101‑1 (MQ=255)
atTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGa > 2:3360638/1‑101 (MQ=255)
atTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGa > 2:149602/1‑101 (MQ=255)
atTTGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGa > 1:5212464/1‑101 (MQ=255)
tttGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGAt > 1:583624/1‑101 (MQ=255)
ttGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc < 1:3528492/101‑1 (MQ=255)
ttGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc < 2:4175217/101‑1 (MQ=255)
tGAGGCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATcg > 1:1137151/1‑101 (MQ=255)
gCAAG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCa > 2:1255616/1‑101 (MQ=255)
aaG.ATAAA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGGGGATCGCGCAAc < 1:5052555/101‑1 (MQ=255)
gataaa.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGt > 1:2845930/5‑101 (MQ=255)
taaa.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTc < 2:3905731/99‑1 (MQ=255)
aaa.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCa > 2:2115732/2‑101 (MQ=255)
aa.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAg > 1:5391062/1‑101 (MQ=255)
a.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAAGGTTCAgg > 2:5091217/1‑101 (MQ=255)
a.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAgg < 2:725349/101‑1 (MQ=255)
a.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAgg < 1:4112905/101‑1 (MQ=255)
cGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGc < 1:4486703/101‑1 (MQ=255)
gggCGCCTAT.CAACTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCg > 2:1367999/1‑101 (MQ=255)
gcCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAtt < 1:4524779/101‑1 (MQ=255)
ccTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCGACGTTCAGGCGGAttt > 1:6033138/1‑101 (MQ=255)
ccTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAttt < 1:1780864/101‑1 (MQ=255)
ccTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAttt < 2:228530/101‑1 (MQ=255)
ccTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAttt > 1:673324/1‑101 (MQ=255)
cTAT.CACCTTGGTGCCAATAGCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAtttt < 1:5606868/101‑1 (MQ=255)
cTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAtttt < 1:1911999/101‑1 (MQ=255)
cTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAtttt > 1:6488046/1‑101 (MQ=255)
cTAT.CACCTTGGTGCAAATACCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAtgtt > 2:6803233/1‑101 (MQ=255)
tAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTtc > 2:5932973/1‑101 (MQ=255)
aT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTtct > 1:6204232/1‑101 (MQ=255)
aT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTtct > 2:6320144/1‑101 (MQ=255)
ttccTTGGTGCAAAAGGACTGGGTGTGAGTCCGAAAGCCGAGGGGGCAGCGCGCCCTTTTCCCTTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTCTcc < 2:880737/99‑1 (MQ=255)
cACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTCTcc > 1:1432981/1‑101 (MQ=255)
aCCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTCTccc > 1:3324939/1‑101 (MQ=255)
aCCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTCTccc < 2:4879825/101‑1 (MQ=255)
ccTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTCTCCCt < 1:4217103/101‑1 (MQ=255)
ccTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTCTCCCt > 2:4491260/1‑101 (MQ=255)
cTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTCTCCCTg < 1:5887627/101‑1 (MQ=255)
cTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTCTCCCTg > 2:2507830/1‑101 (MQ=255)
gTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTCTCCCTGCGGc > 1:6424638/1‑101 (MQ=255)
|
TTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCA.CCCCCGGGATATTTGAGGCAAG.AT.AA.CGGGCGCCTAT.CACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTCTCCCTGCGGC > NC_014034/580876‑581075
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|