| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,575,638 | 5 bp→GGGGC | 100% | intergenic (+40/+129) | corA → / ← RCAP_rcc01455 | magnesium/cobalt transport protein CorA/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,575,638 | 0 | C→G | 100.0% | 130.8 | 37 | intergenic (+40/+133) | corA/RCAP_rcc01455 | magnesium/cobalt transport protein CorA/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (0/37): ref base (0/0): total (0/37) | ||||||||||
| * | NC_014034 | 1,575,639 | 0 | C→G | 100.0% | 131.7 | 38 | intergenic (+41/+132) | corA/RCAP_rcc01455 | magnesium/cobalt transport protein CorA/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (0/38): ref base (0/0): total (0/38) | ||||||||||
| * | NC_014034 | 1,575,640 | 0 | A→G | 100.0% | 128.8 | 38 | intergenic (+42/+131) | corA/RCAP_rcc01455 | magnesium/cobalt transport protein CorA/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (0/38): ref base (0/0): total (0/38) | ||||||||||
| * | NC_014034 | 1,575,641 | 0 | T→G | 100.0% | 116.2 | 38 | intergenic (+43/+130) | corA/RCAP_rcc01455 | magnesium/cobalt transport protein CorA/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (0/38): ref base (0/0): total (0/38) | ||||||||||
| * | NC_014034 | 1,575,642 | 0 | T→C | 100.0% | 128.5 | 38 | intergenic (+44/+129) | corA/RCAP_rcc01455 | magnesium/cobalt transport protein CorA/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (0/38): ref base (0/0): total (0/38) | ||||||||||
CTGGGCCTTCTTCAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGCCATTTG.CGGCG.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAGAAGAAACC > NC_014034/1575565‑1575718
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cTGGGCCTTCTTCAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGcc < 2:457294/101‑1 (MQ=37)
tGGGCCTTCTTCAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCt < 2:3321620/101‑1 (MQ=37)
gggCCTTCTTCAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTG.CCGCCCCCCGCACCCCCTGCCTg < 2:6019983/101‑1 (MQ=255)
ggCCTTCTTCAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGc < 1:2053571/101‑1 (MQ=37)
ggCCTTCTTCAAAGGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGc < 1:1967830/101‑1 (MQ=25)
aaaTGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGAt < 2:3063820/101‑1 (MQ=37)
aaaTGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGAt < 1:2265971/101‑1 (MQ=37)
aaTGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATg < 2:3830362/101‑1 (MQ=37)
tGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTc < 1:817262/101‑1 (MQ=37)
tGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTc < 2:3395530/101‑1 (MQ=37)
ggAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTcc < 2:4171274/101‑1 (MQ=37)
ggAAGGACTGGCTTTAGGGCTGGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTcc < 2:297217/101‑1 (MQ=25)
gAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTccc < 2:7000453/101‑1 (MQ=37)
gAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTccc < 1:6502481/101‑1 (MQ=37)
gAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTccc < 2:2513934/101‑1 (MQ=37)
aGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTccccc < 1:4337621/101‑1 (MQ=37)
aGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTccccc < 2:462731/101‑1 (MQ=37)
ggACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCcg < 1:1356961/101‑1 (MQ=37)
gACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCcgc < 1:6080869/101‑1 (MQ=37)
gACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCcgc < 2:2257128/101‑1 (MQ=37)
tGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGcc < 2:1680458/101‑1 (MQ=37)
cTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGccccc < 1:2166904/101‑1 (MQ=37)
tttAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCt < 1:6021112/101‑1 (MQ=37)
tAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCCCCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTg < 1:4272052/101‑1 (MQ=255)
tAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCCCCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTg < 1:2081246/101‑1 (MQ=255)
tAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTg < 1:6703015/101‑1 (MQ=37)
aGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGc < 2:965162/101‑1 (MQ=37)
gggCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCg < 1:2737554/101‑1 (MQ=37)
ggCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGt < 1:973274/101‑1 (MQ=37)
ttGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTAtt < 2:6839798/101‑1 (MQ=37)
gtGCGCCCGCGCGCGGCTCGGGCGCCCGGAACGGGGGGGGCTGCCGCCC.CCCGCCCCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTAtt < 2:2763977/100‑1 (MQ=255)
tGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTAttt < 1:6730995/101‑1 (MQ=37)
cTCGCGCGGCTCGGGCGCCCCGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCGTGCGTATTTTCCCCa < 1:6855790/101‑1 (MQ=19)
cTCGCGCGGCCCGGGCGCCCGGAACGCGGGGGGCTGCCTCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCa < 1:2236404/101‑1 (MQ=25)
cgcgcgGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCaag < 2:4758946/101‑1 (MQ=37)
ggCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAgaagaa < 1:3946296/101‑1 (MQ=37)
cTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAGAAGAAAc < 1:6589970/101‑1 (MQ=37)
cTCGGGCCCCCGGAACGCGGGTGCCGG.CCGCCCCCCGCACCTCCCGCCTGCGGGGGTCGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAGAAGAAAc < 2:6276150/101‑1 (MQ=19)
tCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAGAAGAAAcc < 1:3062503/101‑1 (MQ=37)
gcGGGCGCCGGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAGAAGAAAcc < 2:1622791/100‑1 (MQ=25)
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CTGGGCCTTCTTCAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGCCATTTG.CGGCG.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAGAAGAAACC > NC_014034/1575565‑1575718
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 32 ≤
ATCG
< 39 ≤
ATCG
|