Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 774,622 | 2 bp→TC | 100% | intergenic (‑76/+43) | oppB1 ← / ← oppA1 | oligopeptide ABC transporter permease OppB/oligopeptide ABC transporter periplasmic oligopeptide‑binding protein OppA |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 774,622 | 0 | G→T | 100.0% | 49.0 | 17 | intergenic (‑76/+44) | oppB1/oppA1 | oligopeptide ABC transporter permease OppB/oligopeptide ABC transporter periplasmic oligopeptide‑binding protein OppA |
Reads supporting (aligned to +/- strand): new base (15/0): ref base (2/0): total (17/0) | ||||||||||
* | NC_014034 | 774,623 | 0 | G→C | 100.0% | 56.5 | 16 | intergenic (‑77/+43) | oppB1/oppA1 | oligopeptide ABC transporter permease OppB/oligopeptide ABC transporter periplasmic oligopeptide‑binding protein OppA |
Reads supporting (aligned to +/- strand): new base (16/0): ref base (0/0): total (16/0) |
CCGGGCCGCAGCGCCCCCCCCCCCCTGGGGAACCGGCCCTGCC.GGT.C..GA.CGTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCAGTATTCG > NC_014034/774595‑774705
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cgcaggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACg > 2:904313/11‑101 (MQ=255)
cgcaggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACg > 1:888017/11‑101 (MQ=255)
cgcaggcccggcgcCCCCCCGCCCGGGGCGGACCGGCCCCGCC.GGTCC..GACCCTACGGTCTCCTATCCTGCGATCACTTCGCCCCCCACCCGTCGGCCACg > 1:3432203/11‑101 (MQ=255)
gcaggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGt > 1:1684666/10‑101 (MQ=255)
gcaggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGt > 2:5550855/10‑101 (MQ=255)
aggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCCCGTTc > 2:6371066/8‑101 (MQ=255)
aggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTc > 1:4138066/8‑101 (MQ=255)
aggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTc > 1:688960/8‑101 (MQ=255)
aggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTc > 1:7027323/8‑101 (MQ=255)
aggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTc > 2:3251495/8‑101 (MQ=255)
ggcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTcc > 2:2832121/7‑101 (MQ=255)
gcccggcgcCCCCCCGCCCGGGGCGGACCGGCCCTGCCGGGC.C..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCCGTCGGCCACGGTccc > 2:109810/6‑100 (MQ=255)
cggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCAGTa > 1:4070306/3‑101 (MQ=255)
ggcgcCCCCCCGCCCGGGTGGGACCGGCCCTGCC.GGT.CCGGC.CCTACGGTCTCTTGTCCTGCGATCACTTCGCCCGCGACCACGCGGCCACGATCCAGTAt > 2:6639767/2‑101 (MQ=255)
ggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCAGTAt > 1:7134034/2‑101 (MQ=255)
cgcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCAGTATTc > 1:1015695/1‑101 (MQ=255)
gcCCCCCCGCCCGGGTCGGACCGGCCCTGCC.GGTCC..GACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCACTATTcc > 1:1654780/1‑100 (MQ=255)
||
CCGGGCCGCAGCGCCCCCCCCCCCCTGGGGAACCGGCCCTGCC.GGT.C..GA.CGTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCAGTATTCG > NC_014034/774595‑774705
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 16 ≤
ATCG
< 23 ≤
ATCG
< 31 ≤
ATCG
< 39 ≤
ATCG
|