Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 1,395,698 | Δ1 bp | 8.0% | intergenic (+510/‑421) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 1,395,698 | 0 | A→. | 8.0% | 97.5 ‑1.5 ‑0.0 | 447 | intergenic (+510/‑421) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (13/23): ref base (198/213): total (211/236) | ||||||||||
Fisher's exact test strand distribution p-value = 2.23e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.96e-01 |
Only 100 of 478 total aligned reads displayed.
CCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTG > NC_014034/1395598‑1395798
|
cccTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGt < 2:437371/100‑1 (MQ=255)
cTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCg > 2:2877296/1‑101 (MQ=255)
cTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCg > 2:2435596/1‑101 (MQ=255)
cTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCg > 2:1080628/1‑101 (MQ=255)
gCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTc > 1:1017147/1‑101 (MQ=255)
aTTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTccccc < 1:8596316/101‑1 (MQ=255)
aTTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTccccc > 1:2764870/1‑101 (MQ=255)
tGTCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCcg < 2:1236883/101‑1 (MQ=255)
gTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCcgc < 2:2113328/101‑1 (MQ=255)
cACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCgg > 1:1731193/1‑101 (MQ=255)
cACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GACGCAGTCGCTCCCCCCGCgg > 1:5642593/1‑101 (MQ=255)
cACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGCGGATCGAAACATCTGCATGCAGTCGGCGG.GCAGCTCTA.GCCGCAGTCGCTCCCGCCGCgg > 1:2979398/1‑101 (MQ=38)
ccTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCggg < 2:873687/100‑1 (MQ=255)
ttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.CCCGCTGGA.GCCGCAGGCGCTTCCCCCGCGGCGGc > 2:7347798/1‑101 (MQ=25)
ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTg > 2:5734907/10‑101 (MQ=2)
ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTg > 1:1189167/10‑101 (MQ=2)
ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTAGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTg > 1:6473577/10‑101 (MQ=2)
gtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTgg < 2:1471612/93‑1 (MQ=2)
ggggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGa > 2:1935834/1‑101 (MQ=255)
gggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:3738050/101‑1 (MQ=255)
ggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:8476112/101‑1 (MQ=255)
gCGAAGCGCCGCTCCCCCCGCGGGGGCGTGGATCAAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:8566409/101‑1 (MQ=255)
ccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:8118958/96‑1 (MQ=2)
gctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGa > 2:3243457/4‑101 (MQ=2)
gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:3855902/1‑101 (MQ=255)
cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.g > 2:5217229/1‑101 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAACT.gg > 2:8493761/1‑101 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.gg > 2:4695163/1‑101 (MQ=255)
ccGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGt < 2:7727175/100‑1 (MQ=255)
cGCCCCCCCCGGGGGGGCGTGGATCGAAACATCTGCATTTAGTCGGCGT.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTa < 1:1574047/101‑1 (MQ=37)
gccccccccGCGGGGGGGGGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTAt < 1:2322296/98‑1 (MQ=255)
cccccccgGGGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATg < 2:1565832/99‑1 (MQ=255)
cTCCCCCCGGGGGGGCGTGGAGCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATg < 2:504086/101‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATg < 1:61707/101‑1 (MQ=255)
ccccccGGGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGa < 1:6704232/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGa > 1:4099766/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCt < 2:179784/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCt < 2:6674320/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCt < 1:437804/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCt < 1:4520389/101‑1 (MQ=255)
ccGGGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTg < 1:2033584/101‑1 (MQ=255)
ggggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCa < 2:6494688/101‑1 (MQ=255)
ggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCaaa < 1:8744175/101‑1 (MQ=255)
cGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGGGTGGATCGAAACG.GGTATGAGTTCGGCGCaaagg > 2:8966096/1‑99 (MQ=37)
cGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACg < 1:2565719/101‑1 (MQ=255)
gAAACATCTGCATGTGGTCGGCGG.GCGGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCt < 1:9137598/101‑1 (MQ=255)
gAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCt > 1:7403700/1‑101 (MQ=255)
gAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCt > 1:5123917/1‑101 (MQ=255)
gAAACATCTGCATGTAGTCGGCGG.GCAGTTCAA.GCCGCAGTCGCACCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTcg > 1:8971841/1‑100 (MQ=255)
aaaCATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTg > 2:4446939/1‑101 (MQ=255)
aaCATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTgt < 1:1080646/101‑1 (MQ=255)
aCATCGGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTgtc < 1:6592999/101‑1 (MQ=255)
cATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTgtcg > 2:5587481/1‑101 (MQ=255)
cttggCATGTAGTCGGCGG.GCAGTTGGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTgtcgt < 2:80515/97‑1 (MQ=255)
ctCTGCATGTGGCCGGCGG.GCGGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTgtcgt < 2:2240799/100‑1 (MQ=255)
aTCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACT.GGTATGGGTCTGGCGCAAACGG..AAAGTCTggcgg > 2:3725528/1‑100 (MQ=255)
cTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGtcgtcg > 2:3537640/1‑101 (MQ=255)
aTGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTcc < 2:7953520/101‑1 (MQ=255)
aTGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTcc < 1:5941947/101‑1 (MQ=255)
aTGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCGGTGGTCGCTcc > 2:4936558/1‑101 (MQ=255)
tGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTccc > 2:7513387/1‑101 (MQ=255)
gTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTcccc > 2:6874540/1‑101 (MQ=255)
ggTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTcccccc < 2:6050490/100‑1 (MQ=255)
gTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCcg < 1:7699651/101‑1 (MQ=255)
ggg.gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCgggg < 2:1017129/100‑1 (MQ=255)
ggg.gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCgggg < 1:6257551/100‑1 (MQ=255)
gg.gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCggggg > 1:1899628/1‑101 (MQ=255)
gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCg > 1:5351869/1‑101 (MQ=255)
aGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTg > 1:3554439/1‑101 (MQ=255)
aGTCCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCggg > 1:7216967/1‑99 (MQ=255)
gtgcGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTgg < 2:6172622/98‑1 (MQ=255)
gTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTgg > 2:2686860/1‑101 (MQ=255)
gTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTgg > 1:6840928/1‑101 (MQ=255)
gTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTgg > 2:8333411/1‑101 (MQ=255)
gTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTgg > 2:5496538/1‑101 (MQ=255)
ttCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGa > 1:3214051/1‑101 (MQ=255)
ttCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGa < 1:7513711/101‑1 (MQ=255)
tCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:5044304/101‑1 (MQ=255)
gA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:3855793/101‑1 (MQ=255)
gA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:2776266/101‑1 (MQ=255)
caggattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTgg < 2:9119184/94‑1 (MQ=2)
gggCCGCAGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:5131107/99‑1 (MQ=255)
aagattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGa > 1:287577/7‑101 (MQ=2)
aagattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGa > 1:4784935/7‑101 (MQ=2)
agattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:7020256/96‑1 (MQ=2)
gcagCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:1556136/98‑1 (MQ=255)
gCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:1401975/1‑101 (MQ=255)
ccGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:5329308/101‑1 (MQ=255)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:2129890/98‑1 (MQ=2)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:5813000/4‑101 (MQ=2)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:7143125/4‑101 (MQ=2)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:7579598/98‑1 (MQ=2)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:7186577/4‑101 (MQ=2)
gtcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 2:2533321/99‑1 (MQ=2)
tcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:6364818/100‑1 (MQ=2)
tcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:6326193/2‑101 (MQ=2)
cAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGGGGATCGaaa > 2:3148402/1‑101 (MQ=2)
aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 1:7880537/1‑101 (MQ=2)
aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTg > 2:5907301/1‑101 (MQ=255)
aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGGGGGTCGCAAcccc > 2:4223438/1‑99 (MQ=255)
|
CCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTG > NC_014034/1395598‑1395798
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|