Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,040,334 Δ1 bp 98.8% intergenic (‑82/‑306) RCAP_rcc01888 ← / → RCAP_rcc01889 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,040,3340G→.98.8% 6.2 ‑1.0 ‑1.4415intergenic (‑82/‑306)RCAP_rcc01888/RCAP_rcc01889hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (221/189):  ref base (4/1):  total (225/190)
Fisher's exact test strand distribution p-value = 3.81e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.68e-02

Only 100 of 467 total aligned reads displayed.

AGTCATCGGTTCTGGTCATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCGC  >  NC_014034/2040234‑2040431
                                                                                                    |                                                                                                 
        gTTCTGGTCATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTgggggatcc                                                                                           >  1:7420958/1‑97 (MQ=255)
        gTTCTGGTCATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTgggggatcc                                                                                           <  1:1846694/101‑5 (MQ=255)
        gTTCTGGTCATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTgggggatcc                                                                                           <  2:4336457/101‑5 (MQ=255)
         ttCTGGTCATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCg                                                                                         <  2:5759418/101‑1 (MQ=255)
           cTGGTCATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGt                                                                                       >  1:1197038/1‑101 (MQ=255)
           cTGGTCATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGt                                                                                       >  1:4077913/1‑101 (MQ=255)
             ggTCATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCg                                                                                     <  1:8638080/101‑1 (MQ=255)
             ggTCATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCg                                                                                     <  2:8672163/101‑1 (MQ=255)
             ggTCATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGGCg                                                                                     >  1:2531999/1‑101 (MQ=255)
              gTCATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGa                                                                                    >  2:3009818/1‑101 (MQ=255)
               tCATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGaa                                                                                   <  2:1063420/101‑1 (MQ=255)
                cATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGG.TCCGGTCGAAg                                                                                  >  2:4083251/1‑101 (MQ=255)
                cATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGGTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAg                                                                                  >  1:7484335/1‑101 (MQ=255)
                 aTGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAgg                                                                                 >  2:8426968/1‑101 (MQ=255)
                   gTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTc                                                                               <  1:6143806/101‑1 (MQ=255)
                   gTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTc                                                                               >  2:5834948/1‑101 (MQ=255)
                   gTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTc                                                                               >  1:2387198/1‑101 (MQ=255)
                    tCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCa                                                                              <  1:1503389/101‑1 (MQ=255)
                     ccTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAg                                                                             <  1:2033283/101‑1 (MQ=255)
                     ccTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAg                                                                             >  2:8329412/1‑101 (MQ=255)
                      cTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGa                                                                            <  2:2695309/101‑1 (MQ=255)
                       tttCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGAc                                                                           >  1:2160483/1‑101 (MQ=255)
                        ttCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACg                                                                          >  1:6875763/1‑101 (MQ=255)
                        ttCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACg                                                                          >  2:1902490/1‑101 (MQ=255)
                          ccGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGtt                                                                        <  1:7882475/101‑1 (MQ=255)
                          ccGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGtt                                                                        <  2:3333729/101‑1 (MQ=255)
                           cGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTtg                                                                       >  1:1643422/1‑101 (MQ=255)
                           cGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTtg                                                                       >  1:2830688/1‑101 (MQ=255)
                            ggTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGACCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTtgt                                                                      >  1:4657457/1‑101 (MQ=255)
                              tGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGc                                                                    <  1:5786436/101‑1 (MQ=255)
                              tGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGc                                                                    >  2:8774564/1‑101 (MQ=255)
                               gCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCa                                                                   <  1:3642239/101‑1 (MQ=255)
                               gCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCa                                                                   <  2:6165800/101‑1 (MQ=255)
                                cGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCaa                                                                  <  1:2199719/101‑1 (MQ=255)
                                 ggATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCaaa                                                                 <  1:8341449/101‑1 (MQ=255)
                                 ggATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCaaa                                                                 >  2:5407637/1‑101 (MQ=255)
                                 ggATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCaaa                                                                 <  2:7465712/101‑1 (MQ=255)
                                 ggATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCaaa                                                                 <  1:3523696/101‑1 (MQ=255)
                                 ggATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCaaa                                                                 >  2:1539973/1‑101 (MQ=255)
                                  gATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCaaaa                                                                <  2:1209533/101‑1 (MQ=255)
                                  gATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCaaaa                                                                <  1:5630343/101‑1 (MQ=255)
                                  gATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCaaaa                                                                <  1:4416596/101‑1 (MQ=255)
                                   aTCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAg                                                               <  1:9029577/101‑1 (MQ=255)
                                    tCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGc                                                              <  1:6739648/101‑1 (MQ=255)
                                    tCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGc                                                              <  2:1647043/101‑1 (MQ=255)
                                      ggCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAc                                                            <  2:1808868/101‑1 (MQ=255)
                                       gCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCTAAAGCAcc                                                           <  2:4679628/101‑1 (MQ=255)
                                            ggCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTGGAAGGTCAGACGTTGTGCAAAAGCACCGgggc                                                      >  2:6767393/1‑100 (MQ=255)
                                            ggCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgggc                                                      >  2:5007993/1‑100 (MQ=255)
                                                 ctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATg                                                >  2:8090846/1‑101 (MQ=255)
                                                  tGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATgg                                               >  1:8506586/1‑101 (MQ=255)
                                                  tGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATgg                                               <  1:2867878/101‑1 (MQ=255)
                                                    ggTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCt                                             >  1:7131349/1‑101 (MQ=255)
                                                     gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt                                            >  1:3765753/1‑101 (MQ=255)
                                                     gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt                                            >  2:5095340/1‑101 (MQ=255)
                                                      ttGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTa                                           <  1:498273/101‑1 (MQ=255)
                                                      ttGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCG.GGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTa                                           >  2:6257559/1‑101 (MQ=255)
                                                       tGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAc                                          >  1:7813523/1‑101 (MQ=255)
                                                       tGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAc                                          >  1:5038097/1‑101 (MQ=255)
                                                        gggATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcg                                         >  2:776552/1‑101 (MQ=255)
                                                          gATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcgcg                                       <  2:390814/101‑1 (MQ=255)
                                                          gATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcgcg                                       >  1:296197/1‑101 (MQ=255)
                                                          gATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcgcg                                       >  1:8958780/1‑101 (MQ=255)
                                                            tGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGt                                     <  1:3872858/101‑1 (MQ=255)
                                                              gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTTCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                   <  1:6448691/101‑1 (MQ=255)
                                                              gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                   <  1:5426184/101‑1 (MQ=255)
                                                              gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                   >  1:6323008/1‑101 (MQ=255)
                                                              gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                   >  2:7125656/1‑101 (MQ=255)
                                                               aaaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATg                                  <  1:932958/101‑1 (MQ=255)
                                                               aaaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATg                                  >  1:1322577/1‑101 (MQ=255)
                                                                aaaaGACCGGAAGGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTGCGCGGTATgg                                 >  1:6539261/1‑101 (MQ=255)
                                                                  aaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGgcg                               >  2:5646090/1‑101 (MQ=255)
                                                                   aGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGgcgc                              <  2:3489480/101‑1 (MQ=255)
                                                                      ccGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTg                           >  2:7586383/1‑101 (MQ=255)
                                                                      ccGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTg                           >  2:7925377/1‑101 (MQ=255)
                                                                       cGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGc                          <  2:6961559/101‑1 (MQ=255)
                                                                        ggAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGcc                         >  2:4849735/1‑101 (MQ=255)
                                                                        ggAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGcc                         <  2:2275182/101‑1 (MQ=255)
                                                                        ggAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGcc                         <  1:6058674/101‑1 (MQ=255)
                                                                        ggAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGGATGGCGCGTGcc                         >  1:6954086/1‑101 (MQ=255)
                                                                         gAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCa                        <  2:13920/101‑1 (MQ=255)
                                                                         gAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCa                        >  1:5158756/1‑101 (MQ=255)
                                                                          aaCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGgcagatcggaa                       >  2:8591920/1‑92 (MQ=255)
                                                                          aaCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaa                       >  2:2790895/1‑101 (MQ=255)
                                                                            cGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAg                     <  1:8774969/101‑1 (MQ=255)
                                                                            cGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAg                     <  1:7586707/101‑1 (MQ=255)
                                                                             ggCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGa                    >  2:9072005/1‑101 (MQ=255)
                                                                             ggCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGa                    >  1:4873748/1‑101 (MQ=255)
                                                                               ccAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcg                  <  2:6409238/101‑1 (MQ=255)
                                                                               ccAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcg                  >  1:9154177/1‑101 (MQ=255)
                                                                                 aGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcggc                <  1:4773749/101‑1 (MQ=255)
                                                                                  ggggCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGGATGGCGCGGGCCGAAGAcggtg               >  2:2071049/1‑99 (MQ=255)
                                                                                    ggCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACggcggc             >  2:256266/1‑101 (MQ=255)
                                                                                     gCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGcc            <  1:2618425/101‑1 (MQ=255)
                                                                                       cAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGc          >  1:5342719/1‑101 (MQ=255)
                                                                                       cAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGc          >  1:4340361/1‑101 (MQ=255)
                                                                                          aCGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaaa       >  1:1000124/1‑101 (MQ=255)
                                                                                           cGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAg      <  1:3237612/101‑1 (MQ=255)
                                                                                            gCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAgg     >  2:3164366/1‑101 (MQ=255)
                                                                                               ggCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAAGgccg  >  2:7224849/1‑99 (MQ=255)
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AGTCATCGGTTCTGGTCATGTCCTTTCCGGTGCGGATCGGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCGC  >  NC_014034/2040234‑2040431

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG