Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,040,373 Δ1 bp 96.1% intergenic (‑121/‑267) RCAP_rcc01888 ← / → RCAP_rcc01889 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,040,3730C→.96.1% 35.2 ‑0.6 ‑1.5429intergenic (‑121/‑267)RCAP_rcc01888/RCAP_rcc01889hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (232/180):  ref base (6/7):  total (241/188)
Fisher's exact test strand distribution p-value = 5.74e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.39e-02

Only 100 of 464 total aligned reads displayed.

GGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGG.CGCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCATAAA  >  NC_014034/2040272‑2040474
                                                                                                     |                                                                                                      
ggCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAc                                                                                                        <  2:1808868/101‑1 (MQ=255)
 gCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCTAAAGCAcc                                                                                                       <  2:4679628/101‑1 (MQ=255)
 gCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAcc                                                                                                       <  2:595769/101‑1 (MQ=255)
  cACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAccg                                                                                                      <  1:6134232/101‑2 (MQ=255)
  cACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAccg                                                                                                      <  1:6927715/101‑2 (MQ=255)
   aCCGCCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAccgg                                                                                                     <  2:4171670/101‑3 (MQ=255)
    ccGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgg                                                                                                    <  2:3436434/101‑1 (MQ=255)
     cGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGggg                                                                                                   >  2:4294787/1‑101 (MQ=255)
      ggCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgggc                                                                                                  >  2:5007993/1‑100 (MQ=255)
        ccTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCgg                                                                                               >  1:5776481/1‑101 (MQ=255)
         ctctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGa                                                                                              >  2:8853061/1‑101 (MQ=255)
           ctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATg                                                                                            >  1:6672738/1‑101 (MQ=255)
           ctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATg                                                                                            <  2:3950863/101‑1 (MQ=255)
            tGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATgg                                                                                           <  1:3601039/101‑1 (MQ=255)
             gggTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGc                                                                                          <  1:9029059/101‑1 (MQ=255)
               gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt                                                                                        >  1:5381229/1‑101 (MQ=255)
               gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt                                                                                        >  1:5726075/1‑101 (MQ=255)
               gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt                                                                                        >  1:4185949/1‑101 (MQ=255)
               gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt                                                                                        <  2:717614/101‑1 (MQ=255)
               gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt                                                                                        <  1:2448318/101‑1 (MQ=255)
                ttGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTa                                                                                       <  1:498273/101‑1 (MQ=255)
                ttGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTa                                                                                       <  1:1262458/101‑1 (MQ=255)
                ttGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCG.GGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTa                                                                                       >  2:6257559/1‑101 (MQ=255)
                 tGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAc                                                                                      >  1:5038097/1‑101 (MQ=255)
                  gggATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcg                                                                                     >  2:776552/1‑101 (MQ=255)
                  gggATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcg                                                                                     <  2:1197006/101‑1 (MQ=255)
                    gATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcgcg                                                                                   >  1:296197/1‑101 (MQ=255)
                     aTGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCgg                                                                                  >  2:5479231/1‑101 (MQ=255)
                       ggAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTa                                                                                >  1:4834142/1‑101 (MQ=255)
                        gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                                                               <  2:8571518/101‑1 (MQ=255)
                        gAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTAt                                                                               <  1:5426184/101‑1 (MQ=255)
                         aaaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATg                                                                              >  1:1322577/1‑101 (MQ=255)
                         aaaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATg                                                                              <  2:5815696/101‑1 (MQ=255)
                           ttccaatctaaCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGgc                                                                            <  1:8592305/92‑1 (MQ=255)
                            aaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGgcg                                                                           <  1:8774890/101‑1 (MQ=255)
                                  ggAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGGGCGTGcc                                                                     >  2:8364197/1‑101 (MQ=255)
                                  ggAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGcc                                                                     >  1:6413937/1‑101 (MQ=255)
                                  ggAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGcc                                                                     <  2:2275182/101‑1 (MQ=255)
                                   gAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCa                                                                    <  1:5893870/101‑1 (MQ=255)
                                   gAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCa                                                                    <  2:1406474/101‑1 (MQ=255)
                                    aaCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaa                                                                   >  1:7580863/1‑101 (MQ=255)
                                    aaCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaa                                                                   >  2:2790895/1‑101 (MQ=255)
                                      cGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAg                                                                 <  1:1888236/101‑1 (MQ=255)
                                      cGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGAGGTATGGCGCGTGCCAAAg                                                                 >  2:7293170/1‑101 (MQ=255)
                                       ggCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGa                                                                >  2:6179522/1‑101 (MQ=255)
                                       ggCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGa                                                                >  1:4652636/1‑101 (MQ=255)
                                        gCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAc                                                               <  1:3403763/101‑1 (MQ=255)
                                         ccAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcg                                                              <  2:6409238/101‑1 (MQ=255)
                                          cAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcgg                                                             >  2:1042454/1‑101 (MQ=255)
                                          cAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcgg                                                             >  1:6842515/1‑101 (MQ=255)
                                          cAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcgg                                                             >  2:7849336/1‑101 (MQ=255)
                                           aGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAG.AACCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcgga                                                            >  1:1695877/1‑100 (MQ=255)
                                            ggggCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGGATGGCGCGGGCCGAAGAcggtg                                                           >  2:2071049/1‑99 (MQ=255)
                                             gggCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcggcgg                                                          >  2:8754330/1‑101 (MQ=255)
                                              ggCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACggcggc                                                         >  1:5566336/1‑101 (MQ=255)
                                               gCCAGACGCAGGCGT.GGGGGTTCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGATGGCGGcc                                                        <  2:9077240/101‑1 (MQ=255)
                                               gCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGcc                                                        >  1:7881225/1‑101 (MQ=255)
                                               gCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGcc                                                        <  1:2618425/101‑1 (MQ=255)
                                                    aCGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaaa                                                   <  2:3737774/101‑1 (MQ=255)
                                                    aCGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaaa                                                   >  1:1000124/1‑101 (MQ=255)
                                                     cGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAg                                                  <  1:3237612/101‑1 (MQ=255)
                                                      gCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAgg                                                 >  2:3164366/1‑101 (MQ=255)
                                                           gcgtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGg.ccgc                                            <  2:7017088/97‑4 (MQ=255)
                                                             gtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGg.ccgcgc                                          >  1:2200651/3‑96 (MQ=255)
                                                              tgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGcc                                          <  1:6254388/100‑1 (MQ=255)
                                                                 gggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATa                                       <  2:5670967/101‑1 (MQ=255)
                                                                     tCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTg                                   >  2:7507272/1‑101 (MQ=255)
                                                                     tCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTg                                   <  1:3812675/101‑1 (MQ=255)
                                                                     tCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTg                                   <  2:4644381/101‑1 (MQ=255)
                                                                      ccGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGa                                  >  1:1554658/1‑101 (MQ=255)
                                                                          tCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGccc                              <  2:5373727/101‑1 (MQ=255)
                                                                           cGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCa                             >  2:805614/1‑101 (MQ=255)
                                                                           cGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCa                             >  1:8877636/1‑101 (MQ=255)
                                                                            gAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAACGGCCGCGCCATAAGTGAGCCCAc                            >  1:7083037/1‑101 (MQ=255)
                                                                             gaGGTCAGGAGTTTTGCAAAAGCA.CCGGGGCGGGTGGCTTACGCGGGATGGCGCGTGCCAAAGCCGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCAcc                           <  2:2960197/100‑1 (MQ=255)
                                                                             aaGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAATGGCCGCGCCATAAGTGAGCCCAcc                           <  2:4379584/101‑1 (MQ=255)
                                                                             aaGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCAcc                           >  2:8259353/1‑101 (MQ=255)
                                                                                gTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCAccggt                        >  1:8346629/1‑98 (MQ=255)
                                                                                 tCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCAccggtt                       <  1:6491855/101‑5 (MQ=255)
                                                                                 tCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCAccggtt                       <  1:777496/101‑5 (MQ=255)
                                                                                 tCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCAccggtt                       <  1:8427331/101‑5 (MQ=255)
                                                                                 tCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCCCGCCATAAGTGAGCCCAccggtt                       >  2:3551275/1‑97 (MQ=255)
                                                                                    gACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCgg                   <  2:6872454/101‑1 (MQ=255)
                                                                                     aCGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGa                  >  2:2696594/1‑101 (MQ=255)
                                                                                      cGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAg                 >  1:2318765/1‑101 (MQ=255)
                                                                                        ttGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAggt               >  1:4025318/1‑100 (MQ=255)
                                                                                        ttGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAggt               <  2:4873588/101‑2 (MQ=255)
                                                                                         tgtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAggtt              >  1:5252706/1‑99 (MQ=255)
                                                                                         tgtgCAAAAGC.CCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAggtt              <  1:7345803/101‑3 (MQ=255)
                                                                                          gtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAggttg             <  2:6731057/101‑4 (MQ=255)
                                                                                          gtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGAGAGCCCA.CCGGTTCGGAggctg             >  1:5150913/1‑98 (MQ=255)
                                                                                            gCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGa          >  1:2080659/1‑101 (MQ=255)
                                                                                             cAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGAt         <  2:5198119/101‑1 (MQ=255)
                                                                                              aaaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATg        >  2:2441342/1‑101 (MQ=255)
                                                                                              aaaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATg        <  1:9172139/101‑1 (MQ=255)
                                                                                              aaaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATg        >  1:4369562/1‑101 (MQ=255)
                                                                                              aaaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATg        <  1:7992259/101‑1 (MQ=255)
                                                                                              aaaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGACAAAGACGGCGGCCGCAAAGGCCGCGGCATAAGCGAGCCC.CCCAGCTCGGGGGGtggctg         >  1:4284391/1‑96 (MQ=255)
                                                                                                aaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCa      >  1:2869117/1‑101 (MQ=255)
                                                                                                     cccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCCGCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATaaa  <  2:1526591/101‑1 (MQ=255)
                                                                                                     |                                                                                                      
GGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGG.CGCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCATAAA  >  NC_014034/2040272‑2040474

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG