| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,493,971 | Δ1 bp | 1.4% | intergenic (+19/‑223) | RCAP_rcc02319 → / → RCAP_rcc02320 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,493,971 | 0 | G→. | 1.4% | 5.8 ‑0.5 ‑0.0 | 365 | intergenic (+19/‑223) | RCAP_rcc02319/RCAP_rcc02320 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (2/3): ref base (91/269): total (93/272) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.05e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.11e-01 | ||||||||||
Only 100 of 395 total aligned reads displayed.
TGATGGCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAA.GG.GGGGG..CGCTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAGCAGA > NC_014034/2493876‑2494067
|
tGATGGCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..AGCTGCCCCCCGTCCg > 2:790557/1‑101 (MQ=255)
aTGGCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCa < 2:4613818/101‑1 (MQ=39)
ggCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAg > 2:772440/1‑101 (MQ=38)
gCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGc < 1:342539/101‑1 (MQ=38)
cGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..GGCTGGCCCCCGTCCGCAAGCgg > 2:1425922/1‑101 (MQ=38)
ggCTGCCCCCCCGGGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGGAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGAc < 1:8626689/100‑1 (MQ=25)
aGCTGCCCGCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGAc < 1:4708498/101‑1 (MQ=37)
cTGCCCCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTc < 2:3056340/101‑1 (MQ=37)
cTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTc < 1:4477869/101‑1 (MQ=37)
tGCCCCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTcc < 1:2649921/101‑1 (MQ=37)
gCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCCAGCGGACTccc > 1:7627945/1‑101 (MQ=37)
gCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTccc > 2:2715102/1‑101 (MQ=37)
ccACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCCAGCGGACTccccc > 2:1154309/1‑101 (MQ=37)
ccACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTccccc > 2:2583795/1‑101 (MQ=37)
ccccGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCg < 1:2844268/100‑1 (MQ=25)
ccccGCGCCCCGCGTCGGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCg < 1:2394515/100‑1 (MQ=25)
ccGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCggg > 2:3775742/1‑101 (MQ=25)
cgcggcccgcTTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGAAAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGa < 1:2595437/95‑1 (MQ=21)
gcgcgcCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGat < 2:5511536/101‑1 (MQ=25)
gcgcgcCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGat < 1:2135915/101‑1 (MQ=25)
gcgcgcCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGat < 1:3505917/101‑1 (MQ=25)
gcgcgcCGCGTCGGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGat < 2:2831014/101‑1 (MQ=25)
gcgcCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGatat < 2:1010938/101‑1 (MQ=25)
gcgcCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACAACAGGCCGAGTAAGGG.GGGGG..GGCTGCCCCCCGGCCGCAAGCGGACTCCCCCCGGGgtat > 2:6489274/1‑101 (MQ=21)
cgccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCCAGCGGACTCCCCCCCGGATAtt > 2:8497676/1‑101 (MQ=25)
cgccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATAtt < 1:3747971/101‑1 (MQ=25)
gccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATAttt < 1:7090858/101‑1 (MQ=25)
gccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATAttt < 2:5002641/101‑1 (MQ=25)
ccccgTCTGGCCCAGCGCCGCGGCGGGCCCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTg < 2:4210597/98‑1 (MQ=21)
cgTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgcag < 2:5348972/101‑1 (MQ=25)
cgTATGGCCCAGCGCCGCGGCGGGCGGGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgcag < 2:5752692/101‑1 (MQ=21)
gTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGGCGCCCCCCCTCCGCCAGCGGACTCCCCCCGGGGTATTTgcagc > 1:2222050/1‑101 (MQ=25)
tCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgcagca < 2:8910033/101‑1 (MQ=25)
cTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCaa > 2:3597667/1‑101 (MQ=25)
cTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCaa > 2:6027240/1‑101 (MQ=25)
ggCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGa < 2:2872178/101‑1 (MQ=21)
gCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATAATTGCAGCAAGAt < 1:6573133/101‑1 (MQ=21)
ccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGa < 2:8083763/101‑1 (MQ=21)
ccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGa < 2:4697996/101‑1 (MQ=21)
cAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaa > 1:4257417/1‑101 (MQ=21)
cAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAA.GGTGGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATTaa < 2:9146321/101‑1 (MQ=21)
aGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaaa < 1:8468030/101‑1 (MQ=21)
aGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaaa < 2:8838211/101‑1 (MQ=21)
aGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaaa > 1:1291021/1‑101 (MQ=21)
gcgcCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAc < 1:5079510/101‑1 (MQ=21)
cgccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAcc < 1:6872812/101‑1 (MQ=21)
cgccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAcc < 2:5256757/101‑1 (MQ=21)
cgccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAcc < 1:6363469/101‑1 (MQ=21)
gccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCg < 2:7460995/101‑1 (MQ=21)
gccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCg > 1:7704678/1‑101 (MQ=21)
ccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCgg < 2:4003316/101‑1 (MQ=21)
ccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCgg < 1:935108/101‑1 (MQ=21)
gcggcgGGGGCGCGGCACGACAGGCCGGGTAAGGG.GGGGG..CGCTGCGCCCCCTCCCGAAGCGGCCTTCCCCCGGGGAAGTTGCAGGACGATCAAACCGGag > 2:162524/1‑100 (MQ=16)
cggcggGCGCGCGGCACGACAGGCCGGGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGGAAGATGAAACCGGATg > 2:5961040/1‑101 (MQ=18)
cggcggGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATg < 2:8683934/101‑1 (MQ=21)
cggcggGCGCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATg < 2:2095322/101‑1 (MQ=21)
ggcgggcgCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGGGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGc > 1:5295295/1‑101 (MQ=21)
gggcgCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCtt > 1:5995945/1‑101 (MQ=21)
ggcgCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCttt < 1:1945162/101‑1 (MQ=21)
ggcgCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCttt < 1:5678555/101‑1 (MQ=21)
ggcgCGCGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCttt < 2:6888974/101‑1 (MQ=21)
gcgcgcGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGGTATTTGCAGCAAGATGAAACCGGCTGCCTTTc > 1:1802607/1‑101 (MQ=18)
gcgcgcGGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTc < 1:786711/101‑1 (MQ=21)
cgcgcgGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGCTATTTGCAGCAAGATGAAACCGGATGCCTTTCa < 1:6468131/101‑1 (MQ=21)
cgcgcgGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa > 1:4839243/1‑101 (MQ=21)
cgcgcgGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa < 2:3501035/101‑1 (MQ=21)
cgGCACGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCtt < 2:6857187/101‑1 (MQ=21)
aCGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCCTCTTGccc > 2:1895580/1‑101 (MQ=18)
aCGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGccc > 1:314690/1‑101 (MQ=21)
cGACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCg < 2:3357381/101‑1 (MQ=21)
gACAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGa > 2:7073967/1‑101 (MQ=21)
aCAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGaa < 2:379302/101‑1 (MQ=21)
aCAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGaa < 1:3255690/101‑1 (MQ=21)
cAGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGaaa > 2:7990327/1‑101 (MQ=21)
cAGGCCGAGTAA.GG.GGGGGT.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGaaa < 1:3587970/101‑1 (MQ=21)
aGGCCGAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGCAat > 2:6214733/1‑101 (MQ=18)
gCCGGGTAA.GG.GGGGGGCCCCTCCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata < 1:8946637/101‑1 (MQ=18)
gAGTAAGGG.GGGGG..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATccc > 1:1152592/1‑101 (MQ=18)
taaggg.ggggg..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggg > 2:7402294/5‑101 (MQ=255)
ggg.ggggg..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgggggg < 2:6346311/100‑1 (MQ=255)
ggg.ggggg..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGAGGAAACCGGATGCCTTTCATCTTGCCCGAAATATCACggcggg > 1:8301384/2‑101 (MQ=18)
ggg.ggggg..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCACGGGCTATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgggggg > 1:4038957/2‑101 (MQ=18)
gg.ggggg..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggggg > 1:5378965/1‑100 (MQ=255)
gg.ggggg..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggggg > 2:4399036/1‑100 (MQ=255)
g.ggggg..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTg < 1:880170/101‑1 (MQ=255)
ggggg..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGa < 1:1052772/101‑1 (MQ=255)
ggggg..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATAGCCCGGGGGGTGa < 1:8155471/101‑1 (MQ=255)
ggg..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAAt < 2:7193470/101‑1 (MQ=255)
ggg..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAAt > 2:5189108/1‑101 (MQ=255)
ggg..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAAt < 2:8176758/101‑1 (MQ=255)
gg..CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATg < 2:3220547/101‑1 (MQ=255)
cgcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGc > 1:4154401/1‑101 (MQ=255)
cgcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGc > 1:734792/1‑101 (MQ=255)
cgcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGGGAATGGc > 1:6159433/1‑101 (MQ=255)
gcTGCCCCCCGTCCGCAAGCGGACTCCCCGCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCg < 2:2362552/101‑1 (MQ=255)
gCCCCCCGTCCGCAAGCGGAGTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGCGGGTGAATGGCGaag < 1:7251021/101‑3 (MQ=21)
gCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaag > 1:5765528/1‑99 (MQ=255)
cccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaagcc < 1:9107171/101‑5 (MQ=255)
cccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaagcc < 1:8102985/101‑5 (MQ=255)
ccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaagcca > 2:5877657/1‑96 (MQ=255)
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TGATGGCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAA.GG.GGGGG..CGCTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAGCAGA > NC_014034/2493876‑2494067
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|