| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,640,203 | Δ1 bp | 1.0% | intergenic (‑179/+97) | thrS ← / ← RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,640,203 | 0 | A→. | 1.0% | 2.6 ‑2.1 ‑0.9 | 418 | intergenic (‑179/+97) | thrS/RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (0/4): ref base (194/220): total (194/224) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.27e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.28e-01 | ||||||||||
Only 100 of 495 total aligned reads displayed.
GCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGG.C.TTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAG > NC_014034/2640104‑2640303
|
gcgttgcAACCGTGGCGGTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGGCAATTCCCCCCCCGAGGTATTTGGAGCAAGATGaaa < 2:856520/95‑1 (MQ=25)
gCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaa < 1:3442538/101‑1 (MQ=25)
cGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGGGCTGCCCCCCCCCTGGCC.CTCGGCCCATTCCCCCCCCCAGGGATTTTGAGCCAGAAGaaaa > 1:5175079/1‑101 (MQ=255)
cGTGTCAACCGTGGCGCTTTGGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaag < 1:9103171/101‑2 (MQ=25)
gtgtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaaga < 1:801475/101‑3 (MQ=25)
gtgtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaaga < 2:1912966/101‑3 (MQ=25)
gtgtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaaga < 1:6841081/101‑3 (MQ=25)
tCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCa < 1:712022/101‑1 (MQ=25)
caCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg < 2:4783237/100‑1 (MQ=21)
ccGTGGCGCTTTTGCGCAGGCAAAACGGGGGCGCTGCCCCCCTCTTGGCC.CTCCGCCAATTCACCCCCCCAGGCATTTGGAGCAAGATG.AAAGAGCATg..gg > 2:3852988/1‑101 (MQ=21)
gTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..tt < 2:6832851/101‑1 (MQ=25)
tGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTc < 2:5471634/101‑1 (MQ=25)
ggCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCa < 1:8619762/101‑1 (MQ=25)
gcgcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCAt < 2:789557/101‑1 (MQ=25)
gcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCt < 2:7145618/101‑1 (MQ=21)
cTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCtt < 1:4678157/101‑1 (MQ=25)
tttGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGc < 2:7390367/101‑1 (MQ=25)
ttGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGcc < 2:6732890/101‑1 (MQ=25)
tGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGGATTTGGAGCCAGATG.AAAGACCAAG..GG..TTCATCTTGCCt > 2:2577157/1‑101 (MQ=21)
cgcAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCCCCCCCCGAGGTCTTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCa < 1:1595539/101‑1 (MQ=25)
cgcAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCa < 2:6146053/101‑1 (MQ=21)
cAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCaaa < 2:3178298/101‑1 (MQ=25)
cAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCaaa > 2:1252188/1‑101 (MQ=21)
aGGCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAat < 1:6354434/101‑1 (MQ=25)
ggCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAata < 1:556535/101‑1 (MQ=25)
cccgaaaAGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAatat > 2:2694194/5‑101 (MQ=17)
gCAAAAGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAatat < 1:4395948/101‑1 (MQ=25)
cgaaaAGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATcc > 1:4307606/3‑101 (MQ=17)
gaaaAGGGGGTGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATccc > 1:5416497/2‑101 (MQ=18)
gaaaAGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGAC..GG..GG..TTTATCTTGCCCCAAATATccc > 1:3313207/2‑101 (MQ=17)
aaaAGGGGGCGCTGCCCCCCTCTTGG.CTTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCg < 2:524788/101‑1 (MQ=18)
aaagggggCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCgg > 1:1414557/4‑101 (MQ=17)
aagggggCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCggg > 1:133504/3‑101 (MQ=18)
aGGGGGGCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCgg < 2:5403377/101‑1 (MQ=25)
ggggggCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCggg > 1:8418753/1‑101 (MQ=21)
agggggCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCgggg > 2:7574840/2‑101 (MQ=18)
gggggCGCTG.CCCCCTCTTGGCC.TTTGGCCAATTC.ACCCCTGGGATATTTCGGGCAAGATGAA...ATCATGCCCC..TTCATCTTGCCGCAAATATCCCgggggg < 1:7814630/101‑1 (MQ=2)
ggggCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCgggggg > 1:2741492/1‑101 (MQ=18)
ggggCGCTG.CCCCCTCTTGGCC.TTTGGCCAATTC.ACCCCTGGGATATTTCGGGCAAGATGAA...ATCATGCCCC..TTCATCTTGCCGCAAATATCCCGGGGGGa < 2:3525400/101‑1 (MQ=2)
ggggCGCTG.CCCCCTCTTGGCC.TTTGGCCAATTC.ACCCCTGGGATATTTCGGGCAAGATGAA...ATCATG..CCCCTTCATCTTGCCGCAAATATCCCGGGGGGa < 2:343243/101‑1 (MQ=2)
gggCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCgggggtg < 1:969375/101‑3 (MQ=18)
gggCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCgggggtg < 1:5077480/101‑3 (MQ=18)
gggCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCgggggtg < 2:8851178/101‑3 (MQ=18)
ggCGCTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGa < 2:4645515/101‑1 (MQ=25)
gcgcTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCgggggtgag < 1:3905923/101‑5 (MQ=21)
gcgcTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCgggggtgag > 1:215241/1‑97 (MQ=21)
gcTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GG..TTTATCTTGCCCCAAATATCCCgggggtgaggc > 1:8864799/1‑95 (MQ=21)
gcTGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTc < 2:453995/101‑1 (MQ=25)
tGCGCCCCTC.TGG.C.TTC.GCC.ATTCCCCCCCCGGGATATTTCGGGCAAGATGAAAGGCATCCG..GT..TTCATCTTGCTGCAAATATCCCGGGGGGAGTccgctt < 1:2520630/101‑5 (MQ=18)
tGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt < 2:6406878/101‑1 (MQ=25)
tGCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt > 2:1781353/1‑101 (MQ=25)
gCCCCCCTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg < 1:3640360/101‑1 (MQ=25)
atctctctTGGCC.TTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa < 2:651767/97‑1 (MQ=25)
cccTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg > 1:281226/1‑101 (MQ=37)
ccTCTTGGCC.TTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg < 2:1490003/101‑1 (MQ=37)
ccTCTTGGCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg < 2:3066294/101‑1 (MQ=37)
ttggcc.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg > 1:762615/6‑101 (MQ=37)
ggcc.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggg > 2:4981206/4‑101 (MQ=37)
c.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc < 2:5663938/101‑1 (MQ=255)
ggCCAATTCACCCCCCGNGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag < 2:2783888/101‑1 (MQ=37)
ccAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcc > 1:487965/1‑101 (MQ=255)
ccAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcc < 1:6536494/101‑1 (MQ=255)
cAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccc > 1:7936033/1‑101 (MQ=37)
aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc < 2:1111937/101‑1 (MQ=255)
aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc > 1:5758641/1‑101 (MQ=37)
aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGAACATG..GG..TTTATCTTGCCTCAAATATCTCGGGGGGAAACAGGAAAGGAGGGGGGGCACGGccca > 2:2931737/1‑100 (MQ=16)
aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc > 2:3266863/1‑101 (MQ=37)
aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc > 1:1093358/1‑101 (MQ=37)
ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc > 2:9118210/1‑101 (MQ=25)
tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt > 2:2398873/4‑101 (MQ=25)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 1:3129534/3‑101 (MQ=255)
caccccccGAGGAATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 1:6647924/3‑101 (MQ=25)
accccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc > 1:3041456/2‑101 (MQ=255)
ccccccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc < 2:8331401/101‑1 (MQ=255)
ccGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGt < 2:7947076/101‑1 (MQ=255)
ccGACGTAGTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTTCCTCAAATACCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGt < 1:2929819/101‑1 (MQ=37)
cGAGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTc > 1:6171331/1‑101 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt > 2:5114242/1‑101 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt > 1:5816572/1‑101 (MQ=255)
ggTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCttt > 2:8158060/1‑101 (MQ=255)
ggTATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCttt < 1:8258630/101‑1 (MQ=255)
tATTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCGTtcg > 1:7341864/1‑100 (MQ=25)
aTTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCNCCTCCCGGGTCTTtctc > 2:3675953/1‑101 (MQ=255)
aTTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc < 2:2338201/101‑1 (MQ=255)
aTTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc > 2:4338923/1‑101 (MQ=255)
aTTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc < 2:8754053/101‑1 (MQ=255)
aTTTGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGCGTTtctc > 1:1948421/1‑101 (MQ=25)
tttGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGGCTTTCTCa > 2:4029055/1‑101 (MQ=255)
ttGGAGCAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa > 2:7012064/1‑101 (MQ=255)
gagcAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCg > 1:3727543/4‑101 (MQ=255)
gcAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAGATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGtt < 2:5899131/100‑1 (MQ=255)
gcAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGtt < 2:2080606/100‑1 (MQ=255)
cAAGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc < 1:1192941/101‑1 (MQ=255)
aaGATG.AAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTcc < 1:4584204/101‑1 (MQ=255)
agagtaaaGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCg < 2:4242161/96‑1 (MQ=255)
aaaGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCa > 1:523221/1‑101 (MQ=255)
aaaGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCa < 1:4132570/101‑1 (MQ=255)
aaaGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCa < 1:7039886/101‑1 (MQ=255)
aaGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAg > 2:7749470/1‑101 (MQ=255)
aaGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCACGGGTCTTTCTCAAGCGTTCCGGCTCAg > 2:6249329/1‑101 (MQ=255)
|
GCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTGG.C.TTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATG..GG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAG > NC_014034/2640104‑2640303
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|