| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,640,207 | Δ1 bp | 11.0% | intergenic (‑183/+93) | thrS ← / ← RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,640,207 | 0 | C→. | 11.0% | 156.1 ‑2.9 ‑0.0 | 465 | intergenic (‑183/+93) | thrS/RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (32/19): ref base (192/214): total (225/240) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.25e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.56e-01 | ||||||||||
Only 100 of 494 total aligned reads displayed.
TCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GG.CTT.CGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGAACC > NC_014034/2640109‑2640307
|
aCCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCCCCCCCCGAGGTATTTGGAGCAATAT.TAAAGACCAAgg > 2:4157635/1‑101 (MQ=21)
aCCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATgg < 2:6289534/101‑1 (MQ=21)
aCCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATgg < 2:8519836/101‑1 (MQ=25)
aCCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATgg < 2:8268564/101‑1 (MQ=25)
gTGGCGCTTTTGCGCAGGCAAAAGGGGGGGGGCGCCCCCCCCCTT.GC.CTTCCGGCCAA.TCACCCCCCCCGGCAGTTTGAGCGAGATCAAAA.ACCATGGG..tt > 1:7501151/1‑101 (MQ=255)
gTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..tt < 2:6832851/101‑1 (MQ=25)
tGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTTGGG.CTT.CGGCCAATTCACCCCCCGAGGGATTTGGAGCAAGATG.AAAGACCCTGGG..GTc > 1:2771956/1‑101 (MQ=21)
gcgcTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCAt < 1:6736064/101‑1 (MQ=25)
gcgcTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCAt < 2:789557/101‑1 (MQ=25)
gcTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCt < 2:7145618/101‑1 (MQ=21)
tttGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGc < 2:7390367/101‑1 (MQ=25)
ttGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGcc < 2:6732890/101‑1 (MQ=25)
tGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCt < 1:6159898/101‑1 (MQ=25)
ggcgaAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCC.ATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTc < 2:6172181/100‑1 (MQ=21)
cAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCaaa < 2:3178298/101‑1 (MQ=25)
cccctaaa.AGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGG..TTTATCTTGCCCCAAata < 2:2124653/96‑1 (MQ=17)
gCAAAA.GGGGGGCCCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAatat < 1:3327943/101‑1 (MQ=21)
cAAAA.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATc < 2:8102212/101‑1 (MQ=21)
gaaa.AGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGG..TTTATCTTGCCCCAAATATccc < 2:4617937/100‑1 (MQ=17)
aaaa.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATcc > 1:4907522/1‑101 (MQ=21)
aaa.AGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGG..TTTATCTTGCCCCAAATATCCCg > 1:7898947/1‑101 (MQ=17)
aaa.AGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGG..TTTATCTTGCCCCAAATATCCCg < 2:5918091/101‑1 (MQ=17)
aa.GGGGGGCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCg < 2:7566000/101‑1 (MQ=21)
aaagggggCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGG..TTTATCTTGCCCCCAATATTCCgg > 2:4485477/4‑101 (MQ=17)
ggggCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCggggg > 2:4307349/1‑101 (MQ=25)
ggggCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCggggg < 1:4324482/101‑1 (MQ=25)
ggggCGCTG.CCCCCTCTT.GGCCTT.TGGCCAATTC.ACCCCTGGGATATTTCGGGCAAGATGAA...ATCATGCCCCTTCATCTTGCCGCAAATATCCCGGGGGGa < 2:343243/101‑1 (MQ=2)
gggCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGG..TTTATCTTGCCCCAAATATCCCgggggtg < 2:1067756/101‑3 (MQ=18)
gggCGCTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGG..TTTATCTTGCCCCAAATATCCCgggggtg < 2:8851178/101‑3 (MQ=18)
gcgcTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGG..TTTATCTTGCCCCAAATATCCCgggggtgag < 1:3905923/101‑5 (MQ=21)
gcgcTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGG..TTTATCTTGCCCCAAATATCCCgggggtgag < 1:4542479/101‑5 (MQ=21)
gcgcTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAg > 1:3700564/1‑101 (MQ=25)
gcgcTGCCCCCCTCGT.GGCCTT.CGGCCAATTCGCCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGG..TTTATCTTGCCCCAAATATCCCgggggtgag < 1:6932700/101‑5 (MQ=18)
gcTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGG..TTTATCTTGCCCCAAATATCCCgggggtgaggc > 1:359358/1‑95 (MQ=21)
cTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTcc < 1:6588502/101‑1 (MQ=25)
cTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTcc > 2:647789/1‑101 (MQ=25)
cTGCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTcc < 1:8871747/101‑1 (MQ=25)
gCCCCCCTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg < 2:550863/101‑1 (MQ=37)
ccccTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaaa > 1:1422510/1‑101 (MQ=37)
cccTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg < 1:5114776/101‑1 (MQ=37)
ccTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg < 2:3066294/101‑1 (MQ=37)
ccTCTT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg < 2:3988275/101‑1 (MQ=37)
ctctT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa < 1:8371097/101‑1 (MQ=37)
ctctT.GGCCTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCATCAAATATCCCGGGGGGAGTCCTGAAAgat > 1:651777/1‑99 (MQ=25)
tctT.GGCCTT.CGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAc < 1:4157754/101‑1 (MQ=37)
tggccTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGNACggg > 1:2043381/5‑101 (MQ=37)
gccTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggggg < 2:528230/99‑1 (MQ=37)
cTT.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc < 1:4739177/101‑1 (MQ=255)
t.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag > 1:941515/1‑101 (MQ=37)
t.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag < 1:5227328/101‑1 (MQ=255)
t.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag < 2:151925/101‑1 (MQ=255)
t.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag > 1:7725284/1‑101 (MQ=37)
t.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag < 1:1764971/101‑1 (MQ=255)
t.CGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag < 1:5809196/101‑1 (MQ=255)
cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga > 2:5140365/1‑101 (MQ=255)
cAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccc > 2:1882129/1‑101 (MQ=37)
aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc > 1:1093358/1‑101 (MQ=37)
aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc > 2:3266863/1‑101 (MQ=37)
aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc > 1:5471368/1‑101 (MQ=37)
aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc > 1:873633/1‑101 (MQ=37)
ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc > 2:9118210/1‑101 (MQ=25)
ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc > 2:5052234/1‑101 (MQ=255)
tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt > 1:1196910/4‑101 (MQ=25)
tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt < 2:5697428/98‑1 (MQ=255)
tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt < 1:5725110/98‑1 (MQ=255)
tcaccccacGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt > 2:3503572/4‑101 (MQ=25)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 1:7289234/3‑101 (MQ=255)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 1:3129534/3‑101 (MQ=255)
cccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc < 1:2820490/100‑1 (MQ=255)
accccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc < 2:2782350/100‑1 (MQ=255)
accccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc < 1:2577230/100‑1 (MQ=255)
accccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc > 1:3041456/2‑101 (MQ=255)
ccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCgg < 2:2601930/101‑1 (MQ=255)
ccGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGt < 2:7947076/101‑1 (MQ=255)
ccGACGTAGTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTTCCTCAAATACCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGt < 1:2929819/101‑1 (MQ=37)
cGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTc > 2:4821013/1‑101 (MQ=255)
cGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTc < 2:192220/101‑1 (MQ=255)
cGAGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTc < 1:6341211/101‑1 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt > 1:8184897/1‑101 (MQ=255)
ggTATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCttt < 2:135509/101‑1 (MQ=255)
tATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtct > 1:8591302/1‑101 (MQ=255)
tATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtct > 2:3848884/1‑101 (MQ=255)
tATTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGCCTTtct > 1:7112251/1‑101 (MQ=255)
aTTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc < 2:8754053/101‑1 (MQ=255)
aTTTGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc > 2:2564527/1‑101 (MQ=255)
ttGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa > 1:8001882/1‑101 (MQ=255)
ttGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa > 2:7012064/1‑101 (MQ=255)
tGGAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAg > 2:2906232/1‑101 (MQ=255)
ggAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGc > 1:3805831/1‑101 (MQ=255)
ggAGCAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGc > 1:4642810/1‑101 (MQ=255)
cAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc > 2:237332/1‑101 (MQ=255)
cAAGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc > 2:3568439/1‑101 (MQ=255)
aaGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTcc > 2:5403565/1‑101 (MQ=255)
aaGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTcc > 1:1341909/1‑101 (MQ=255)
aGATG.AAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCg < 1:2398946/101‑1 (MQ=255)
aaGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAg < 2:4711485/101‑1 (MQ=255)
aGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGa < 1:5331427/101‑1 (MQ=255)
gACCATGGG..TTCATCTTGACTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGaa < 2:6555670/101‑1 (MQ=255)
aCCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGAAc > 2:1188982/1‑101 (MQ=255)
ccATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGAAcc < 2:7793053/101‑1 (MQ=255)
|
TCAACCGTGGCGCTTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTCTT.GG.CTT.CGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGG..TTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGAACC > NC_014034/2640109‑2640307
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|