Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,757,445 Δ1 bp 1.6% intergenic (+322/‑247) RCAP_rcc02566 → / → RCAP_rcc02567 reverse transcriptase catalytic domain‑containing protein/resolvase

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,757,4450C→. 1.6% 6.6 ‑0.4 ‑0.4313intergenic (+322/‑247)RCAP_rcc02566/RCAP_rcc02567reverse transcriptase catalytic domain‑containing protein/resolvase
Reads supporting (aligned to +/- strand):  new base (2/3):  ref base (163/144):  total (166/147)
Fisher's exact test strand distribution p-value = 6.69e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.82e-01

Only 100 of 380 total aligned reads displayed.

GGCCGCCCGCACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCTCTCC  >  NC_014034/2757345‑2757544
                                                                                                     |                                                                                                   
ggCCGCCCGCACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.c                                                                                                     >  2:4731607/1‑101 (MQ=255)
 gccgccCGCACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.cc                                                                                                    <  2:1720202/101‑1 (MQ=255)
   cgcccgcACGGCAAGCCCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.cccc                                                                                                  <  2:8638835/101‑1 (MQ=255)
     cccgcACGGCAAGCCCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAACAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.cccccc                                                                                                <  2:6260238/101‑1 (MQ=255)
     cccgcACGGCAAGCCCCAGCCGCAAAAGCGATAAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.cccccc                                                                                                <  1:4378725/101‑1 (MQ=255)
      ccgcGCGGCAAGCCCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.ccccccc                                                                                               <  2:4051275/101‑1 (MQ=255)
      ccgcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.ccccccc                                                                                               <  2:3045057/101‑1 (MQ=255)
        gcccGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.ccccccccc                                                                                             <  1:3644225/98‑1 (MQ=255)
        gcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.ccccccccc                                                                                             <  1:1741694/101‑1 (MQ=255)
         cACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCg                                                                                            <  1:9033017/101‑1 (MQ=255)
           cGGCAAGCGCCAGCCGCAAAGGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGt                                                                                          >  1:8217553/1‑101 (MQ=255)
           cGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCggg                                                                                          >  2:4119940/1‑100 (MQ=255)
           cGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGt                                                                                          >  2:9126162/1‑101 (MQ=255)
           cGGCAAGCGCCAGCCGCAAAAGCGAGCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGt                                                                                          <  2:5082455/101‑1 (MQ=255)
            ggCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTg                                                                                         >  1:718182/1‑101 (MQ=255)
             gCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTgg                                                                                        <  2:6998563/101‑1 (MQ=255)
                   cccAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGccgccc                                                                                  <  2:3463445/100‑1 (MQ=255)
                   cccAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGccgccc                                                                                  <  2:1120158/100‑1 (MQ=255)
                   cccAGCCGCAAAAGCGATCAGGGCCGCAGATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGccgccc                                                                                  <  1:6401429/100‑1 (MQ=255)
                    ccAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGccgcccg                                                                                 <  1:6031960/101‑1 (MQ=255)
                        ccGCAAAAGCGATCAGGGCCGCATTTTTTGGCGGAAAAATCCGAGCCCCCCCCCCGACCGAAGTGCAGCCGCGCAG.GCCCCCCCCGGTGGCCGCCCGCCCt                                                                             <  2:2821695/101‑1 (MQ=255)
                         cGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTg                                                                            <  1:8689828/101‑1 (MQ=255)
                           cAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTggg                                                                          <  1:3740029/101‑1 (MQ=255)
                            aaaaGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGACGTGCAGCCGCGCAG.CCCCCCCCCGGGGGCCGGCCCCCCTGGGc                                                                         >  2:2937121/1‑101 (MQ=255)
                             aaaGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGcc                                                                        >  1:3940727/1‑101 (MQ=255)
                                gCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCCGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGt                                                                     <  2:4449616/101‑1 (MQ=255)
                                 cGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCgct                                                                    >  2:5890366/1‑99 (MQ=255)
                                 cGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGtt                                                                    <  2:5393405/101‑1 (MQ=255)
                                 cGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGtt                                                                    >  1:1114457/1‑101 (MQ=255)
                                 cGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGtt                                                                    <  1:4729265/101‑1 (MQ=255)
                                 cGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCCGGGCCCGtc                                                                    >  2:8327631/1‑100 (MQ=255)
                                  gATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGGGGCCGCCCGCCCTGGGCCCGTTc                                                                   >  1:5161219/1‑101 (MQ=255)
                                   aTCGGGGCCGCATATTTTGGCGGAAAAACCCGAGCCACCCCCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCa                                                                  <  2:3569614/101‑1 (MQ=255)
                                   aTCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCa                                                                  >  1:3493891/1‑101 (MQ=255)
                                   aTCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCa                                                                  >  1:4626055/1‑101 (MQ=255)
                                    tCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGCGGCCGCCCCCCCCGGGCACGTTCac                                                                 >  2:197646/1‑100 (MQ=255)
                                    tCAGGGCCGCATATTTTGGCGGAAAAACCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAg                                                                 <  1:6816570/101‑1 (MQ=255)
                                     cAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAgg                                                                >  1:4086787/1‑101 (MQ=255)
                                      aGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAggc                                                               >  2:6919449/1‑100 (MQ=255)
                                       gggCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTc                                                              >  1:5873310/1‑101 (MQ=255)
                                            gCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCTCGTTCAGGTCGCCCa                                                         <  1:7643498/101‑1 (MQ=255)
                                            gCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCa                                                         >  2:5302046/1‑101 (MQ=255)
                                            gCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGGTCAGGTCGCCCa                                                         <  1:6612605/101‑1 (MQ=255)
                                            gCATATTTGGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCa                                                         <  2:8012691/101‑1 (MQ=255)
                                              atatTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCCGGTCGCCCAGc                                                       >  2:2313531/1‑101 (MQ=255)
                                                atTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTcagatcggaa                                                     >  2:6115736/1‑92 (MQ=255)
                                                atTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCAc                                                     <  1:6248023/101‑1 (MQ=255)
                                                  tttGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGc                                                   >  2:3199119/1‑101 (MQ=255)
                                                    tGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG..CCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTcc                                                <  2:1563292/101‑1 (MQ=255)
                                                      gCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTccc                                               >  2:3698335/1‑101 (MQ=255)
                                                      gCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTccc                                               >  1:2398595/1‑101 (MQ=255)
                                                      gCGGAAAAACCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTccc                                               <  1:5584017/101‑1 (MQ=255)
                                                       cGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCg                                              <  2:8199026/101‑1 (MQ=255)
                                                         gAAAAACCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAg                                            <  1:1187068/101‑1 (MQ=255)
                                                          aaaaaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAgg                                           >  2:7328490/1‑101 (MQ=255)
                                                           aaaaTCCGAGCCACCCCCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgc                                          <  1:4502435/101‑1 (MQ=255)
                                                           aaaaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgc                                          >  1:8971577/1‑101 (MQ=255)
                                                            aaaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgcc                                         >  2:7664496/1‑101 (MQ=255)
                                                            aaaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGGTCAGGTCGCCCAGCACGCTCCCCAGgcc                                         >  2:1860287/1‑101 (MQ=255)
                                                             accccGAGCCACCCCCTCGGCCGAAGTGCGGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgccg                                        <  1:7076868/98‑1 (MQ=255)
                                                              aTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgccgc                                       >  2:5708890/1‑101 (MQ=255)
                                                              aTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgccgc                                       <  2:2468250/101‑1 (MQ=255)
                                                                 cGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGcccc                                    >  1:2999809/1‑101 (MQ=255)
                                                                  gacccaccaCCTCGACCGAAGTCCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCa                                   <  2:4625920/98‑1 (MQ=255)
                                                                  gAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCTCCCAGCACGCTCCCGAGGCCGCCCCa                                   <  2:3944533/101‑1 (MQ=255)
                                                                  gAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCa                                   <  2:4897772/101‑1 (MQ=255)
                                                                  gAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCa                                   >  1:730824/1‑101 (MQ=255)
                                                                   aGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAg                                  <  1:8430201/101‑1 (MQ=255)
                                                                   aGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGACGCCGCCCCAg                                  >  2:5999396/1‑101 (MQ=255)
                                                                   aGCCACCACCTCGACCGAAGTGCAGCCCCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAg                                  <  2:2066360/101‑1 (MQ=255)
                                                                       accaccTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCGCCCCGCCCTGGGCCCGTTCAGGGCGCCCAGCACGCTCCCCTGGCCGCCCCCGggcc                              >  2:2547660/1‑101 (MQ=255)
                                                                        ccaccTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGCGGCCGCCCCAGggccg                             >  2:8457138/1‑101 (MQ=255)
                                                                        ccaccTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCCGcgccc                             >  2:1478280/1‑100 (MQ=255)
                                                                           ccTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGccc                          >  1:3236579/1‑101 (MQ=255)
                                                                           ccTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGccc                          >  1:2084244/1‑101 (MQ=255)
                                                                             tCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCt                        <  1:738384/101‑1 (MQ=255)
                                                                               gACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTcc                      <  1:1417078/101‑1 (MQ=255)
                                                                               gACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTcc                      <  1:9143062/101‑1 (MQ=255)
                                                                                cccGAAGGGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTccc                     <  1:2623032/100‑1 (MQ=255)
                                                                                aCCGAAGTGCCGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTccc                     <  1:8327994/101‑1 (MQ=255)
                                                                                  cGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGc                   >  2:6705647/1‑101 (MQ=255)
                                                                                   gAAGTGCAGCCGCGCAGCCCCCCCCCCGGGGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGc                   >  1:2823923/1‑101 (MQ=255)
                                                                                   gAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGcc                  >  2:4182955/1‑101 (MQ=255)
                                                                                   gAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGcc                  >  1:5044314/1‑101 (MQ=255)
                                                                                    aaGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGccc                 >  1:4267846/1‑100 (MQ=255)
                                                                                     aGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCCCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAc                >  1:7970129/1‑101 (MQ=255)
                                                                                      gTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAcc               <  1:8039745/101‑1 (MQ=255)
                                                                                       tGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAccc              <  1:6115490/101‑1 (MQ=255)
                                                                                        gCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAcccc             <  1:4878282/101‑1 (MQ=255)
                                                                                        gCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGGCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGGCCCTCCCGCCAcccc             >  2:6805748/1‑101 (MQ=255)
                                                                                        gCAGCCGCGCAC.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAcccc             <  2:9061258/101‑1 (MQ=255)
                                                                                         cggCCGCCCAC.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCg            <  1:667691/99‑1 (MQ=255)
                                                                                         cAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCg            <  2:7542479/101‑1 (MQ=255)
                                                                                          aGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCgg           >  2:2673475/1‑101 (MQ=255)
                                                                                            gcgcgCAC.CCCCCCCCCGGCGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCa         <  1:577889/100‑1 (MQ=255)
                                                                                             cgcgCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCAc        <  2:5558487/101‑1 (MQ=255)
                                                                                               cgcAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACct      >  1:8889187/1‑101 (MQ=255)
                                                                                                 cAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACctct    <  2:8842978/101‑1 (MQ=255)
                                                                                                  aG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCtctc   >  2:3367266/1‑101 (MQ=255)
                                                                                                   g.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCTCTcc  <  1:3980955/101‑1 (MQ=255)
                                                                                                     |                                                                                                   
GGCCGCCCGCACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCTCTCC  >  NC_014034/2757345‑2757544

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG