| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,253,890 | +GGGGC | 100% | intergenic (+48/+43) | RCAP_rcc01181 → / ← hisH | hypothetical protein/imidazole glycerol phosphate synthase subunit HisH |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,253,890 | 1 | .→G | 100.0% | 165.1 | 133 | intergenic (+48/+43) | RCAP_rcc01181/hisH | hypothetical protein/imidazole glycerol phosphate synthase subunit HisH |
| Reads supporting (aligned to +/- strand): new base (86/1): ref base (19/27): total (105/28) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.07e-15 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.65e-01 | ||||||||||
| * | NC_014034 | 1,253,890 | 2 | .→G | 100.0% | 165.1 | 133 | intergenic (+48/+43) | RCAP_rcc01181/hisH | hypothetical protein/imidazole glycerol phosphate synthase subunit HisH |
| Reads supporting (aligned to +/- strand): new base (86/1): ref base (19/27): total (105/28) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.07e-15 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.36e-01 | ||||||||||
| * | NC_014034 | 1,253,890 | 3 | .→G | 100.0% | 165.1 | 133 | intergenic (+48/+43) | RCAP_rcc01181/hisH | hypothetical protein/imidazole glycerol phosphate synthase subunit HisH |
| Reads supporting (aligned to +/- strand): new base (86/1): ref base (19/27): total (105/28) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.07e-15 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.18e-01 | ||||||||||
| * | NC_014034 | 1,253,890 | 4 | .→G | 100.0% | 165.1 | 133 | intergenic (+48/+43) | RCAP_rcc01181/hisH | hypothetical protein/imidazole glycerol phosphate synthase subunit HisH |
| Reads supporting (aligned to +/- strand): new base (86/1): ref base (19/27): total (105/28) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.07e-15 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.74e-01 | ||||||||||
| * | NC_014034 | 1,253,890 | 5 | .→C | 100.0% | 165.7 | 133 | intergenic (+48/+43) | RCAP_rcc01181/hisH | hypothetical protein/imidazole glycerol phosphate synthase subunit HisH |
| Reads supporting (aligned to +/- strand): new base (86/1): ref base (19/27): total (105/28) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.07e-15 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.89e-01 | ||||||||||
Only 100 of 155 total aligned reads displayed.
TGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGAG.........CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAA > NC_014034/1253790‑1253954
|||||
tGGTGCTGGTCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....g < 2:6002396/101‑1 (MQ=255)
tGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....g > 1:1326338/1‑101 (MQ=255)
tGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....g > 2:8555315/1‑101 (MQ=255)
tGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....g < 1:5354444/101‑1 (MQ=255)
gggtcctgcccAAGCTCGGCTTCCAGGCCGGGTGCGCCTTCGAGGCGAAATAAACCCACCCCGCCCCGCTCTCATCTTGCCCTAAATCCCTCGGGGGTGC.....g < 1:4232846/91‑1 (MQ=255)
ggTGCTGGGCAAGTGCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....g.....g < 2:3666647/101‑1 (MQ=255)
ggTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....g.....g < 1:34238/101‑1 (MQ=255)
ggTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGATCTCATCTTGCCCTAAATACCTCGGGGGTGC.....g.....g < 1:7193819/101‑1 (MQ=255)
tGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....g.....ggg < 2:8711436/101‑2 (MQ=255)
tGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....g.....ggg > 1:2447492/1‑100 (MQ=255)
tGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....g.....ggg < 2:6057410/101‑2 (MQ=255)
gggCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cgg > 1:1781962/1‑100 (MQ=255)
gggCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cgg > 2:5855873/1‑100 (MQ=255)
gggCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cgg > 2:6707128/1‑100 (MQ=255)
ggCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cgga < 2:6302869/101‑3 (MQ=255)
ggCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cgga < 2:8793931/101‑3 (MQ=255)
ggCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cgga > 1:149369/1‑99 (MQ=255)
gaaaaGCGCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cgga > 2:5476609/4‑99 (MQ=255)
gCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggag > 2:1055552/1‑98 (MQ=255)
gCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggag > 2:3033536/1‑98 (MQ=255)
gCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggag < 2:6864967/101‑4 (MQ=255)
cAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagc < 2:1441839/101‑5 (MQ=255)
aaGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagcc < 1:7826247/101‑6 (MQ=255)
aaGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagcc > 2:6728619/1‑96 (MQ=255)
aaGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagcc > 2:5947550/1‑96 (MQ=255)
aaGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagcc < 2:4968898/101‑6 (MQ=255)
aGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagccc < 1:3920448/101‑7 (MQ=255)
aGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagccc < 1:7497415/101‑7 (MQ=255)
aGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagccc < 1:2681763/101‑7 (MQ=255)
aGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagccc < 1:5692483/101‑7 (MQ=255)
gCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagcccc < 1:8769849/101‑8 (MQ=255)
gCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagcccc < 1:4094477/101‑8 (MQ=255)
cTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagccccc < 2:6681810/101‑9 (MQ=255)
cGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagcccccgc > 1:4752015/1‑91 (MQ=38)
cGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGGg.........cggagcccccgc > 1:7840961/1‑91 (MQ=38)
ggCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCg > 2:5836135/1‑101 (MQ=12)
gCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGa > 2:575108/1‑101 (MQ=12)
cGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaa > 2:2660637/1‑101 (MQ=12)
cGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaa > 2:1173669/1‑101 (MQ=12)
gAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaaa > 1:6546052/1‑101 (MQ=12)
gAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaaa > 1:6772444/1‑101 (MQ=12)
gAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaaa > 2:6503729/1‑101 (MQ=12)
aaaTAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAAt > 1:2727867/1‑101 (MQ=9)
aaaTAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAAt > 1:8663666/1‑101 (MQ=9)
aaTAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATc > 1:5175856/1‑101 (MQ=9)
aaTAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATc > 1:979518/1‑101 (MQ=9)
aTAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATcc > 1:3401184/1‑101 (MQ=9)
aTAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATcc > 1:1235660/1‑101 (MQ=9)
aTAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATcc > 1:475660/1‑101 (MQ=9)
tAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCct > 1:1418121/1‑101 (MQ=9)
tAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCct > 2:1395948/1‑101 (MQ=9)
tAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCct > 1:2384669/1‑101 (MQ=9)
aaacccacccccgccccgcTCTCATCTTGCCCTAACTCCCTGGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCct < 2:8074193/92‑1 (MQ=0)
aaaCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc > 1:5025910/1‑101 (MQ=9)
aaaCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc > 1:7667888/1‑101 (MQ=9)
aaaCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc > 2:6509054/1‑101 (MQ=9)
aaaCCGATCACGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAACTccac > 2:5945615/1‑99 (MQ=2)
aaCCGGTCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctct > 1:8841053/1‑101 (MQ=2)
aCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCtctc > 1:3100799/1‑101 (MQ=9)
aCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCtctc > 2:7023524/1‑101 (MQ=9)
ccGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCa > 2:722753/1‑101 (MQ=9)
cGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCAc > 1:6955682/1‑101 (MQ=9)
cGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGCCGGATTCCCCTCAc > 2:2173292/1‑101 (MQ=2)
cGACCCCCCCCCGCTCTCATCTTGCCCTAAATCCCTGGGGGGTGCGGGGGG.....GGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCAc < 2:3854897/101‑1 (MQ=2)
gATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACg > 1:4909665/1‑101 (MQ=9)
gATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACg > 2:8092207/1‑101 (MQ=9)
aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGACATCCTCTCCCgg > 2:3733071/1‑101 (MQ=9)
tCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGc > 1:5838248/1‑101 (MQ=9)
tCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGc > 2:404281/1‑101 (MQ=9)
tCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGc > 2:2050074/1‑101 (MQ=9)
tCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGc > 2:9082893/1‑101 (MQ=9)
tCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGGGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGc > 2:6733417/1‑101 (MQ=9)
cccgccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCt > 1:4626118/1‑101 (MQ=9)
cccgccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCt > 2:95684/1‑101 (MQ=9)
gccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTcc > 2:1333188/1‑101 (MQ=9)
gccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTca > 1:4226714/1‑100 (MQ=9)
ccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGt > 2:4908913/1‑101 (MQ=9)
ccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGt > 1:3873006/1‑101 (MQ=9)
cgcTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGtt > 1:1656071/1‑101 (MQ=9)
gcTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTc > 2:618467/1‑101 (MQ=9)
gcTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTc > 1:5717891/1‑101 (MQ=9)
ctctCATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCa > 1:4081208/1‑101 (MQ=9)
tctcATCTTGCCCTAAATACCTCGGGGGTGG.....G.....GGGGGGGACCCCCCGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAg < 2:4075102/101‑1 (MQ=9)
tctcATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAg > 1:8480789/1‑101 (MQ=9)
ctcATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAgg > 1:869899/1‑101 (MQ=9)
ctcATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAgg > 1:4472095/1‑101 (MQ=9)
ctcATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAgg > 1:8500534/1‑101 (MQ=9)
tcATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGa > 2:4065500/1‑101 (MQ=9)
tcATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGa > 2:3012837/1‑101 (MQ=9)
tcATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGa > 2:150018/1‑101 (MQ=9)
tcATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGa > 1:7342186/1‑101 (MQ=9)
tcAGCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTGTCACGGCTTCCAGTTCAGGa > 1:8810848/1‑101 (MQ=9)
cATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa > 1:9058708/1‑101 (MQ=9)
cATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa > 2:1093288/1‑101 (MQ=9)
cATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa > 2:1397449/1‑101 (MQ=9)
cATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa > 1:6961741/1‑101 (MQ=9)
cATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa > 1:6366021/1‑101 (MQ=9)
cATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa > 2:4679216/1‑101 (MQ=9)
cATCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa > 2:6348156/1‑101 (MQ=9)
aTCTTGCCCTAAATACCTCGGGGGTGC.....GGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaaa > 1:4440906/1‑101 (MQ=9)
|||||
TGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGC.....G.....GGAG.........CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAA > NC_014034/1253790‑1253954
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|