| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,396,031 | +G | 16.3% | intergenic (+843/‑88) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,396,031 | 2 | .→G | 16.3% | 261.0 ‑0.6 ‑0.1 | 484 | intergenic (+843/‑88) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (35/44): ref base (195/210): total (230/254) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.41e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.32e-01 | ||||||||||
Only 100 of 524 total aligned reads displayed.
GATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT > NC_014034/1395931‑1396131
|
aTGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCTCGGGCGG.GTGGATCGAAACTCGCCTTCGATCCGGGCCGGCCTC.CCGCCT.GC.cgc..g > 1:9086805/1‑101 (MQ=37)
aTGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.cgc..g > 1:6734391/1‑101 (MQ=255)
gCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTc > 1:1434443/1‑101 (MQ=255)
gCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTc > 2:3292516/1‑101 (MQ=255)
gCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTc < 2:1364916/101‑1 (MQ=255)
cGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCg < 2:3184304/101‑1 (MQ=255)
gTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGc > 1:8738586/1‑101 (MQ=255)
tCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTc > 2:4061335/1‑101 (MQ=255)
cATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTcc < 2:4101956/101‑1 (MQ=255)
ggCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTccccc < 1:8355748/101‑1 (MQ=255)
gCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTcccccc < 1:8140252/101‑1 (MQ=255)
gCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTcccccc < 2:4703270/101‑1 (MQ=255)
cTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCcgc > 1:7800799/1‑101 (MQ=255)
cGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTGCCCCcgcgcg > 2:3413008/1‑99 (MQ=255)
cGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGc < 1:4818303/101‑1 (MQ=255)
ggCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGt > 1:7466198/1‑101 (MQ=255)
ggCAGTGGACTGGTCGCTCCCCCCCCGGGGGCGGGGGACCGAAACCCCCCCTCG.TCCGCGGCTTCCTC.ACCCCTGGC.CCC..GCCCCCCCCCCCCCggggcgg > 1:3863660/1‑98 (MQ=255)
aGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGa < 1:4919727/101‑1 (MQ=255)
aGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGa > 1:7882265/1‑101 (MQ=255)
aGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGa > 1:3125235/1‑101 (MQ=255)
tctgcgcggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGa < 2:824873/94‑1 (MQ=2)
tGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 2:495620/101‑1 (MQ=255)
tGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTGGCCGC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:5423499/101‑1 (MQ=255)
gggACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:1049657/100‑1 (MQ=255)
ctgcgcggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTCGTATTGT.GCGCTG..GTCGCTCCCCCCGCGGGGGCGTGGAt > 2:641327/7‑101 (MQ=2)
tgcgcggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:19931/96‑1 (MQ=9)
tgcgcggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:8859178/96‑1 (MQ=9)
tgcgcggTCCCTGCCCCCGCGGGGGC.CTGGATCCAAACTCGGCCTCGATCCGATC.AGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:5301786/96‑1 (MQ=2)
ggACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:5239120/1‑101 (MQ=255)
ggACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:6520424/1‑101 (MQ=255)
ggACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:7285038/1‑101 (MQ=255)
ggACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGCGGATCg > 2:6188057/1‑101 (MQ=255)
gcgcggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:362679/97‑1 (MQ=9)
aCTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:5682072/101‑1 (MQ=255)
aCTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:8480181/101‑1 (MQ=255)
cTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:4889813/1‑101 (MQ=255)
cggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:6945872/100‑1 (MQ=2)
cggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:2247879/100‑1 (MQ=2)
ggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 1:3229322/101‑1 (MQ=9)
ggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 2:4459135/101‑1 (MQ=2)
ggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 1:5153240/1‑101 (MQ=9)
ggTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa < 1:121219/101‑1 (MQ=255)
gTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct > 1:978268/1‑100 (MQ=2)
gTCGCGCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAg < 2:3774205/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActt < 2:1879601/101‑3 (MQ=2)
cGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgc < 2:4607404/101‑1 (MQ=255)
cGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgc > 2:8741892/1‑101 (MQ=255)
cGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgc > 1:1664640/1‑101 (MQ=255)
cTCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgat < 1:61432/101‑6 (MQ=2)
tCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatg > 1:4189848/1‑95 (MQ=2)
tCCCCCCGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatg > 2:7960895/1‑95 (MQ=2)
ccccccGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCAt > 1:2564854/1‑101 (MQ=255)
cccccGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatgac < 1:6245237/101‑9 (MQ=2)
cccGCGGGGGC.GTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC..GTATT.GCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatgacca < 2:8894215/101‑11 (MQ=2)
gggggC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGta < 2:2043693/101‑1 (MQ=255)
ggggC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtat < 2:3110036/101‑1 (MQ=255)
gggC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata < 1:7614403/101‑1 (MQ=255)
ggC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat > 1:2153321/1‑101 (MQ=255)
ggC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat < 1:635570/101‑1 (MQ=255)
ggcgtgatccGAACCTCCCACGCGGTCCGCGCTTGGCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat < 2:8519548/92‑1 (MQ=25)
gC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATg < 2:7884233/101‑1 (MQ=255)
gC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATg < 2:3905608/101‑1 (MQ=255)
c.GTGGATCGAACCTCGCCCTCGATCCGCGCTTGCCTC.ACCCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGc < 1:2932466/101‑1 (MQ=255)
gTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGcc > 1:5854349/1‑101 (MQ=255)
ggATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCg < 2:1443563/101‑1 (MQ=255)
ggATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCg > 2:7459863/1‑101 (MQ=255)
tCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTg < 2:1153832/101‑1 (MQ=255)
tCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCCCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTg > 2:352751/1‑101 (MQ=255)
cGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GCCCCTCCCCCCGCGGGGGCGGGGATCGAAACAGGCGCATCGGAGGTATATGCCCGGTgg > 2:6129579/1‑100 (MQ=38)
gAAAATCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag > 2:9108756/1‑101 (MQ=255)
aaaCTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgaga > 2:5396106/1‑101 (MQ=255)
aaaCTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgaga < 2:1857188/101‑1 (MQ=255)
accTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGAc < 2:673548/99‑1 (MQ=255)
aaCTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGAc < 2:5901397/101‑1 (MQ=255)
aCTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACg < 1:278130/101‑1 (MQ=255)
aCTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACg < 1:4409550/101‑1 (MQ=255)
cGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCt > 2:7143410/1‑101 (MQ=255)
gCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTg < 2:629831/101‑1 (MQ=255)
gATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTc > 1:6937142/1‑101 (MQ=255)
aTCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcc < 1:4312944/101‑1 (MQ=255)
aTCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcc > 1:7096394/1‑101 (MQ=255)
aTCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcc > 1:1801372/1‑101 (MQ=255)
ccGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccc < 2:2978615/101‑1 (MQ=255)
cTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCcgcg > 2:7626832/1‑101 (MQ=255)
tGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCggg > 1:4034553/1‑101 (MQ=255)
cTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGc < 2:5560110/101‑1 (MQ=255)
aCGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTg < 1:6659952/101‑1 (MQ=255)
gCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGa < 2:6653044/101‑1 (MQ=255)
ccT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:2650092/101‑1 (MQ=255)
ccT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt > 1:1145830/1‑101 (MQ=255)
cT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:6024875/101‑1 (MQ=255)
cT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATc > 2:1751091/1‑101 (MQ=255)
t.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:5688967/101‑1 (MQ=255)
t.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:1271380/101‑1 (MQ=255)
cgC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:5125080/100‑1 (MQ=255)
c.cGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:7296418/101‑1 (MQ=255)
cgc..gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 1:5009125/1‑101 (MQ=255)
cgc..gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 1:3404929/1‑101 (MQ=255)
c..gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt > 1:3606976/1‑101 (MQ=255)
c..gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt > 2:289197/1‑101 (MQ=255)
|
GATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGC.GTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC.ACGCCT.GC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT > NC_014034/1395931‑1396131
Base quality scores:
ATCG
< 3 ≤
ATCG
< 21 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|