| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,732,702 | +GG | 100% | intergenic (‑126/‑277) | RCAP_rcc01601 ← / → tgt | FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,732,702 | 1 | .→G | 100.0% | 27.8 | 169 | intergenic (‑126/‑277) | RCAP_rcc01601/tgt | FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase |
| Reads supporting (aligned to +/- strand): new base (2/154): ref base (9/4): total (11/158) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.51e-10 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.59e-07 | ||||||||||
| * | NC_014034 | 1,732,702 | 2 | .→G | 100.0% | 27.8 | 170 | intergenic (‑126/‑277) | RCAP_rcc01601/tgt | FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase |
| Reads supporting (aligned to +/- strand): new base (2/155): ref base (9/4): total (11/159) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.43e-10 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.12e-07 | ||||||||||
Only 100 of 258 total aligned reads displayed.
TATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.CC..GGGC..GGG..CGG..G...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTCC > NC_014034/1732604‑1732784
||
tatataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGGG.ACCc..gggc..g > 2:8808093/1‑101 (MQ=255)
atataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.Cc..cggg..ggg > 1:2331098/1‑101 (MQ=255)
atataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.Cc..cggg..ggg > 1:917195/1‑101 (MQ=255)
atataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.Cc..cggg..ggg > 1:2717092/1‑101 (MQ=255)
tataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGTCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.Cc..cggg..gggg > 1:7329098/1‑100 (MQ=255)
tataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGTCGCGGCGGGGCCGCGGCG.ACCc..gggc..ggc > 1:4978701/1‑100 (MQ=255)
ataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCc..gggc..gggg > 2:4726699/1‑100 (MQ=255)
ataGGGTATCGGGGGGAGAGGTAAAAGCCGTCGGTGGGGGGCGGAAAGCCGCGGGCCAAGCAGGGTTTCGGCGCAGCGGGGCCGCGGCG.AGGc..gggc..gggg > 2:1283380/1‑100 (MQ=255)
taGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCc..gggc..ggggg > 1:4791151/1‑99 (MQ=255)
taGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCc..gggc..ggggg < 2:5726826/101‑3 (MQ=255)
aGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGGG.A.Cc..cggg..ggg..ggg..g > 1:6668487/1‑101 (MQ=255)
gggTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGGGCC.Cc..gggc..gggggcg > 2:4210820/1‑97 (MQ=255)
gggTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCc..gggc..gggggct < 2:5247596/101‑5 (MQ=255)
gggTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCc..gggc..ggg..ggg..g > 2:3675076/1‑101 (MQ=255)
gggTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCc..gggc..ggg..ggg..g > 2:7064875/1‑101 (MQ=255)
ggTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCc..gggc..gggggctc < 2:2538498/101‑6 (MQ=255)
ggTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCc..gggc..gggggctc < 2:8903601/101‑6 (MQ=255)
gTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCc..gggc..gggggctcc < 2:4146603/101‑7 (MQ=255)
gTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGC..GGG...GG..G...Gcc > 1:1158653/1‑101 (MQ=255)
caTCGGGGGGAGAGGTAAAGGCCGTCGGTGCGCGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCGCC.Cc..gggc..gggggctccg < 2:2888033/100‑8 (MQ=255)
aTCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGC..GGG...GG..G...Gcccc > 2:1612037/1‑101 (MQ=255)
aTCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.CC..CGGG..GGG..Ggg..g...ggcgc > 1:2528202/1‑97 (MQ=255)
cGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGG..GGG..GGG..G...Gcgccc > 1:6770678/1‑101 (MQ=255)
cGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGC..AGG...GG..G...Gccggcc > 2:832119/1‑97 (MQ=255)
cGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.CC..CGGG..GGG..GGG..G...Gccgccc > 2:2328319/1‑100 (MQ=255)
cGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.CC..CGGG..GGG..GGG..G...Gcacccc > 2:4858018/1‑100 (MQ=255)
ggggggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGC..GGG..Ggg..g...gggcccc > 1:5937719/1‑95 (MQ=255)
ggggggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.Cc..cggg..ggg..gggcgggggccc > 1:5714952/1‑92 (MQ=255)
ggggggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.CC..CGGG..GGG..GGG..G...Gccccccc > 1:9004246/1‑99 (MQ=255)
gggggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGGG.ACCC..GGGC..GGG..GGG..G...Cccccccc > 2:7477722/1‑99 (MQ=255)
gggggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGC..GGG..GGG..G...Gccccccc > 1:4534886/1‑99 (MQ=255)
gggggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.CCCGGGGC..GGG..Ggg..g...gggcccc > 1:3523465/1‑95 (MQ=255)
ggggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.CC..CCGC..GCG..Ggg..g...gggcggcgcc > 2:1758959/1‑92 (MQ=255)
ggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGC..GGG..Ggg..g...ggcgccccccc > 2:3222525/1‑91 (MQ=255)
gagGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGC..GGG..GGC..G...GCCGCCCCCccccc > 1:2308456/1‑101 (MQ=255)
agGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCAcccc < 1:1938919/101‑1 (MQ=25)
ggTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCAccccc < 1:7279045/101‑1 (MQ=25)
ggTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCAccccc < 1:3567784/101‑1 (MQ=25)
ggTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCAccccc < 1:5750371/101‑1 (MQ=25)
aaaGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGc < 1:2103293/101‑1 (MQ=25)
aaaGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGC..GGG..GGGTCC...GGCCCCGCACCCCCGGc > 2:4200446/1‑101 (MQ=255)
ggCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTa < 1:3049472/101‑1 (MQ=25)
gCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTAt < 1:5192050/101‑1 (MQ=25)
gCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTAt < 1:5592399/101‑1 (MQ=25)
gCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTAt < 1:7183287/101‑1 (MQ=25)
gatctggTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTAtt < 2:595651/96‑1 (MQ=21)
cGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTAttt < 1:5546090/101‑1 (MQ=25)
cGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTAttt < 2:6263842/101‑1 (MQ=25)
cGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTAttt < 2:8936504/101‑1 (MQ=25)
ggcGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTg < 2:7322606/99‑1 (MQ=21)
cGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTgcg < 2:3550895/101‑1 (MQ=21)
ggTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTgcgc < 1:3214200/101‑1 (MQ=25)
ggCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCa < 2:546338/100‑1 (MQ=21)
ggCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCa < 2:2996180/100‑1 (MQ=21)
cGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCaag < 2:9051217/101‑1 (MQ=21)
cGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCaag < 1:3996934/101‑1 (MQ=21)
ggCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCaagaag < 2:6668227/101‑1 (MQ=18)
gCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAagaaga < 2:2360154/101‑1 (MQ=18)
gAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAAc < 2:281692/101‑1 (MQ=18)
aaaGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACa < 1:940709/101‑1 (MQ=18)
aaGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACaa < 2:8220967/101‑1 (MQ=18)
cgcgTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCgg < 1:2893085/101‑1 (MQ=18)
cgTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGa < 1:1661085/101‑1 (MQ=18)
cgTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGC..GGG..GGG..GCC.CCCCCCCCACCCCCCGCGGATTTTCGCCCAGAAGAAAAAAGCgggc > 2:3344069/1‑100 (MQ=255)
tGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGAcc < 1:3151674/101‑1 (MQ=18)
ccAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAg < 2:771328/101‑1 (MQ=18)
ccAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAg < 2:3758519/101‑1 (MQ=18)
ccAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAg < 1:1879932/101‑1 (MQ=18)
cAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAgg < 2:3766147/101‑1 (MQ=18)
cAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGC..GGG..GGGTCC...CCCCCCCCCCCCCCCGCGTCTTTTCGCCCAGAAGAAAAAAGCcggggccgg > 2:8550346/1‑95 (MQ=255)
aaGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.CC..CGGG..GGG..GGG..GTCCCCCCCCCCACCCCCCGCGGATTTGCGCCCAGAAGAAAAAAGCGGGACCCGGc > 1:3895827/1‑101 (MQ=255)
gCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGccc < 2:2451446/101‑1 (MQ=18)
cAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCATGcccc < 1:6033480/101‑1 (MQ=18)
cAGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGcccc < 2:4947733/101‑1 (MQ=18)
aGGGTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGccccc < 2:926006/101‑1 (MQ=18)
gggTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGcccccc < 1:6342982/101‑1 (MQ=18)
gggTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGcccccc < 1:1221964/101‑1 (MQ=18)
gggTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGcccccc < 2:6970295/101‑1 (MQ=18)
ggTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCt < 2:6813355/101‑1 (MQ=18)
ggTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCt < 1:8274933/101‑1 (MQ=18)
ggTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGC..GGG..GGG..GCC.GCCCCCCCCCCCCCCCCGCCGTTTTGCCCAGAAGAAAAAAACGGGGACAGGcgccccc > 2:1876990/1‑100 (MQ=255)
gTTTCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTg < 1:762002/101‑1 (MQ=18)
tttCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGc < 1:2493419/101‑1 (MQ=18)
tttCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGc < 1:8059519/101‑1 (MQ=18)
ttCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCa < 1:3675185/101‑1 (MQ=18)
ttCGCCGCGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...CCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCa < 2:9000966/101‑1 (MQ=25)
cgccgcGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGc < 1:8542072/101‑1 (MQ=18)
gccgcGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGcc < 1:7953615/101‑1 (MQ=18)
gccgcGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGcc < 2:8624204/101‑1 (MQ=18)
ccgcGGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCg < 2:2618005/101‑1 (MQ=18)
cgcgGGGGGGCCGCGGCG.ACCC..GGGC..GGGGCCTC..C...GCCCCCGCACTCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGc < 1:1395764/101‑1 (MQ=25)
cgcgGCGGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGc < 1:9051967/101‑1 (MQ=18)
gcggcgGGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCa < 1:4379799/101‑1 (MQ=18)
ggcggGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATg < 2:8387048/101‑1 (MQ=18)
gcggGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATGc < 2:4421199/101‑1 (MQ=18)
cggGGCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATGcc < 1:8814534/101‑1 (MQ=18)
ggggCCGCGGCGCC.CC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATGCCg < 2:7940752/101‑1 (MQ=18)
ggggCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCCGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCCGCAGCCGCACGccc > 2:1064201/1‑100 (MQ=18)
ggCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTc < 2:5356495/101‑1 (MQ=18)
gCCGCGGCG.ACCC..GGGCGGGGG..CTC..C...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTcc < 1:7573093/101‑1 (MQ=18)
||
TATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCG.A.CC..GGGC..GGG..CGG..G...GCCCCCGCACCCCCGGCGTATTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTCC > NC_014034/1732604‑1732784
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|