| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,732,866 | +G | 91.5% | intergenic (‑290/‑113) | RCAP_rcc01601 ← / → tgt | FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,732,866 | 3 | .→G | 91.5% | 15.1 ‑0.5 ‑1.7 | 82 | intergenic (‑290/‑113) | RCAP_rcc01601/tgt | FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase |
| Reads supporting (aligned to +/- strand): new base (10/65): ref base (0/7): total (10/72) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.89e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.96e-02 | ||||||||||
Only 100 of 116 total aligned reads displayed.
CTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCC....GT...C...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGC > NC_014034/1732766‑1732948
|
cTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...cccccc < 2:3895712/101‑1 (MQ=255)
cTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...cccccc < 1:2406561/101‑1 (MQ=255)
cTGCAGCCACATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...cccccc < 2:7595793/101‑1 (MQ=255)
tGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGCGGGGGAGG...cccccc > 2:5402430/1‑101 (MQ=255)
gCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGGAG...cccccccc > 2:2483603/1‑99 (MQ=255)
gCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGGAG...CCCCCC....gc > 2:2729958/1‑100 (MQ=255)
cAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCC....gcg < 1:1814054/101‑3 (MQ=255)
cAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGGAG...ccccccccc > 1:2617009/1‑98 (MQ=255)
cAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGAAG...caccccccc > 2:5632416/1‑98 (MQ=255)
aGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCC....gcgg > 2:3766251/1‑98 (MQ=255)
cGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCC....gcgggtc < 1:5551296/101‑7 (MQ=255)
gCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGGAG...gccccccccgggtg > 2:8799210/1‑93 (MQ=255)
gCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGGAG...gccccccccgggcg > 2:5164857/1‑93 (MQ=255)
gCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGGAG...gccccccccgggcg > 1:244060/1‑93 (MQ=255)
gCATCCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCC....gcgggtcg < 1:1064219/101‑8 (MQ=255)
cATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGGAG...gcccccccggggcgc > 1:3805046/1‑92 (MQ=255)
aTGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGGAG...ccccccccggggggcc > 1:5534488/1‑91 (MQ=255)
aTGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGAAG...gccccccccgggcgcc > 2:5961451/1‑91 (MQ=255)
tGCCGCCCGCGTCAACAGGCAAGGTCCCCGCTTTTCCTAGGCAAAATCCGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCC....gcgggtcgcct < 2:4000740/101‑11 (MQ=37)
cGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGAAG...CCCCCC....GC...C...GG.ccgcccccg > 1:8193809/1‑94 (MQ=255)
gcAACAGGAGAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCC....GCGGGT...CG.CCTCGGGCTTGccc < 2:6776328/100‑1 (MQ=21)
acgggCAGGGCCCCCGCTTTTCCTGGGCAAAATACGCCCTCCTTTCTTTTCGGGGGGGCGGG.GGTTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAg < 2:571090/98‑1 (MQ=12)
ggCAGGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTTTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g < 1:4492154/101‑1 (MQ=18)
ggCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g < 2:8963130/101‑1 (MQ=21)
ggCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g < 1:7822077/101‑1 (MQ=21)
ggCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.g < 2:7740725/101‑1 (MQ=21)
gccagggcccccGTTTTCCCTGGGCAAAATCCCCCCTTCTTTCTTTGGGGGGGGGGGGG.GGGGAAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.g < 2:4614877/93‑1 (MQ=2)
gCAAGGGCCCCGCTTTTCCTAGGCAAACTACGCCCTTCTTTCTTTGCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.Ga < 2:929356/101‑1 (MQ=18)
gCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.Ga < 1:921973/101‑1 (MQ=21)
cAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.Gaa > 2:3870616/1‑101 (MQ=21)
aGGGCCGCGCTGTCCCTAGTCAAACTTCGCCCTTCTTTCTTTGCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAg < 2:2887872/101‑1 (MQ=9)
gggCCCGGTTTTTCCGGGGAAAAGTCCGCCCTTGTTTTTGTGGGGGGGGGGGGG.GGGGGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGc < 1:6290766/101‑1 (MQ=2)
gcccccGTTTTTCCTAGGCAAAATCCCCCCTTTTTTCTTTGGGGGGGGGCGGG.GGGGGAAC...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCt < 1:67034/99‑1 (MQ=2)
cacggCTTTTCCGGGCCAAAATGGGCTTTTGTTTCTTGCAGGGGGGGGAGA.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.c < 1:1283412/97‑1 (MQ=2)
cccGCTTTTCCTAGGCAAAATCCGCCCTTCTTTCTTGTCGGGGGGGGGGG.GGGTGAAC...CCCCCC....GCGGGT...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.cc < 1:8173736/101‑1 (MQ=18)
ccGCTTTCCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCC....GC...GGGTCG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.ccc < 2:8669873/101‑1 (MQ=18)
cGCTTTTCCTGGGCAAAATGCGCCCTTCTTTCTTTGCGGGGGGGCGGG.GGGTGAAG...CCCCCC....GC...GGGTCG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.cccc < 2:2508570/101‑1 (MQ=17)
cTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTGGGGGGGGGGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.cccccc < 1:5297489/101‑1 (MQ=18)
cTTTCCCTAGGCAAAATCCCCCCTTTTTTCTTTTGGGGGGGGCGGG.GGGTGACG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.cccccc < 1:5963820/101‑1 (MQ=9)
ttttCCTAGGCACAATTCGCCTTTCTTTCTTTGCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCg < 2:4879547/101‑1 (MQ=17)
ttttCCTAGGCAAAATCCGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCg < 2:4676943/101‑1 (MQ=18)
tttCCTAGGCAAAATCCGCCCTTCTTTCTTTGGGGGGGGGGGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGt < 1:4570822/101‑1 (MQ=17)
ttCCTAGGCAAAATGCGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTg < 2:4103966/101‑1 (MQ=18)
ttCCTAGGCAAAANCCGCCTNNNTTTNTTNNCGGGGGGGCGGG.GGTTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTg < 1:3639305/101‑1 (MQ=17)
tcccTAGGCAAAATCCGCCCTTCTTTCTTTTGGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTg < 2:4534751/99‑1 (MQ=17)
tCCTAGGCAAAATCCGCCCTTTTTTCTTTTGGGGGGGGGGGG.GGGTGAAC...CCCCCCGCG.GG...T...CG.CCTTGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGa < 1:4754998/101‑1 (MQ=12)
tCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGGAGGC.CCCCCCG...GG...G...CGCCCCCGGGCTGGCCCCCGGC.GGAAGCTT.ccccccccc > 1:6426769/1‑98 (MQ=255)
ccTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGaa < 2:2580140/101‑1 (MQ=21)
cTAGGCAAAATCCGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGaaa < 2:7003610/101‑1 (MQ=18)
agtcAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAc < 2:9143811/98‑1 (MQ=18)
aGGCAAATTCCCCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAc < 1:1687178/101‑1 (MQ=17)
aGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAc < 2:8439840/101‑1 (MQ=21)
gacAAAAGTCGCCCTTCTTTCTTTGGGGGGGGGCGGG.GGTGGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAAcc < 1:5693992/99‑1 (MQ=9)
gCAAGATGCCCCCTTCTTTTGTTAGGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCt < 2:7089179/101‑1 (MQ=9)
gCAAAAGACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGTGGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCt < 1:7302494/101‑1 (MQ=18)
cAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCtt < 2:5169475/101‑1 (MQ=21)
cAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGAAG...CCCCCCGCG.GG...G...CG.CCTCGGGGCTGGCCGAGGG.GGAAGCTT.CCCCCCCGGGAAAccct > 1:2980902/1‑99 (MQ=12)
aaaTACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGGAGGC.CCCCCCGG..GG...C...GG.CCCCCGCCTTCCCCGGGGG.GAAAGCGT.CCCCCCCGGAAAAccctc > 1:6050026/1‑98 (MQ=255)
aattccgccTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGcc < 1:5888929/94‑1 (MQ=18)
aaTCCGCCCTTCTTTCTTTGCGGGGGGGGGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGcc < 1:2629042/101‑1 (MQ=18)
aCGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGGGGAGCCCCCCCCC....GG...G...CGCCCCCGGGCTTCCCCGGGGG.GAAGGCTT.CCCCCCGGGAAAACCtgccccc > 2:5253443/1‑95 (MQ=255)
gtccTTCTTTCTTTTGGGGGGGGGGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTgcgc < 2:8334277/99‑1 (MQ=18)
ccTTCTTTCTTGGGGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTgcgcgc < 1:9073136/101‑1 (MQ=17)
tctttcttTTCGGGGGGGCGGG.GGGGGAAG...CCCCCCCCGGGG...C...CG.CCCCGGGCTTGCCCCGGGG.GAAACCTT.CCCCCC.CGAAAAACCTGCCCgcgccccgc > 1:8914027/1‑96 (MQ=255)
tctttcttTTCGGGGGGGCGGG.GGGGGAAG...CCCCCCCCG.GG...G...GG.CCCCGGGGTTGCCCCCGGC.GGAAGCTTCCCCCCCGGGAAAACCTTGccgccccgccc > 2:907546/1‑92 (MQ=255)
tttccttgTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCg < 2:9003824/97‑1 (MQ=18)
ttccttgtggggggggGGGC.GGGTGAAG...CCCCCCGCG.GG...G...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGc < 1:922659/92‑1 (MQ=18)
tttttgggggggggGGGG.GGGTGAGC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCtt < 1:2135367/94‑1 (MQ=17)
tctttTCGGGGGGGCGGG.GGGGGGAGGC.CCCCCCGG..GG...C...GG.CCCGGGGGTGGCCCGGGGG.GCAAGCTT.CCCCCCCCGAAAACCTGCCCTGCGCGCGGCGCt > 1:1162582/1‑101 (MQ=255)
ttttgggggggggGGGG.GGGGGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 1:383728/95‑1 (MQ=17)
ctttTGGGGGGGGGGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 2:4139532/101‑1 (MQ=18)
ctttTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 1:4139230/101‑1 (MQ=21)
ctttTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 1:5165026/101‑1 (MQ=21)
ctttTCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCttt < 2:2084553/101‑1 (MQ=21)
ctttTCGGGGGGGCGGG.GGGGGAAGGC.CCCCCCGG..GG...G...GG.CCCCGGGGTGGCCCGGGGG.GAAGGGTC.CCCCCCGCGAAAACCTTTCC.GCGCGCGCCggctt > 2:6227605/1‑97 (MQ=255)
tttcCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTc < 2:3750071/101‑1 (MQ=18)
tttCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTcc < 1:56048/101‑1 (MQ=21)
tttCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...G...CG.GCTCGGGGTTGCCCGGGGG.GAAAGCGT.TCCCCCGGGAAAAACTTTGCTGCGCGCGTGGGTTTcc > 1:1338346/1‑101 (MQ=255)
tttCGGGGGGGCGGG.GGGCGAAG...CCCCCCGCG.GG...G...CG.CCTCCGGGTTGCCCGAGGC.GGAAGCTT.CCCCCCCCGAAAAACCTGCCTGCGCGCGGCCCCTTcc > 2:6345974/1‑101 (MQ=2)
ttgggggggggGGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTcc < 1:4961944/97‑1 (MQ=18)
ttCGGGGGGGCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTccc < 2:3511610/101‑1 (MQ=21)
ttCGGGGGGGCGGG.GGGGGAAG...CCCCCCCCG.GG...G...CG.CCCCCGGCTTGCCCCCGGCGGAAACATT.CCCCCCCGGAAACACTT.CCTGGGCGCGGCGCTTTcgc > 2:5968239/1‑99 (MQ=255)
tggggggggGGGG.GGGGGAGG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCt < 1:322251/99‑1 (MQ=18)
cGGGGGGGCGTG.GGTGGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCtt < 2:2246000/101‑1 (MQ=18)
cGGGGGGGCGGG.GGGGGAAG...CCCCCCGCG.GG...G...CG.CCCCCGGCGTGCCCGCGGCGGAAACGTC.CCCCCCCCGAAAACC.TGCCCCCGCGCGGCGCTTTCCCtt > 2:8016072/1‑101 (MQ=255)
ggggggCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTc < 2:8516181/101‑1 (MQ=21)
ggggggCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTc < 2:1136105/101‑1 (MQ=21)
gggggCGGG.GGGTGACG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCg < 2:5301255/101‑1 (MQ=21)
gggGGGG.GGGTGAAC...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGc < 1:6303815/101‑1 (MQ=21)
gggCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGc < 1:5688135/101‑1 (MQ=21)
gggCGGG.GGGGGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGc < 2:8008591/101‑1 (MQ=21)
ggCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGcc < 1:331132/101‑1 (MQ=21)
gCGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGccc < 2:3950001/101‑1 (MQ=21)
cGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCg < 2:1699815/101‑1 (MQ=21)
cGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCg > 1:3962372/1‑101 (MQ=21)
cGGG.GGGTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCg > 2:267526/1‑101 (MQ=21)
ggg.gggTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGccccg > 2:5569540/1‑99 (MQ=21)
ggg.gggTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCgc > 1:7707072/1‑100 (MQ=21)
ggg.gggTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGCCGCTTTCCCTTTCGGCCCgg > 2:705857/1‑101 (MQ=21)
gg.gggTGAAG...CCCCCCGCG.GG...T...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGgc < 2:2717010/101‑1 (MQ=21)
|
CTGCAGCCGCATGCCGTCCGCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGG.GGGTGAAG...CCCCCC....GT...C...CG.CCTCGGGCTTGCCCGAGGC.GAAAGCTT.CCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGC > NC_014034/1732766‑1732948
Base quality scores:
ATCG
< 3 ≤
ATCG
< 10 ≤
ATCG
< 22 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|