| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,748,575 | +G | 100% | intergenic (‑279/‑119) | RCAP_rcc01616 ← / → gppA | hypothetical protein/guanosine‑5'‑triphosphate,3'‑diphosphate pyrophosphatase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,748,575 | 1 | .→G | 100.0% | 73.3 | 256 | intergenic (‑279/‑119) | RCAP_rcc01616/gppA | hypothetical protein/guanosine‑5'‑triphosphate,3'‑diphosphate pyrophosphatase |
| Reads supporting (aligned to +/- strand): new base (209/21): ref base (4/21): total (214/42) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.64e-15 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.41e-01 | ||||||||||
Only 100 of 352 total aligned reads displayed.
CTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.C.GGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCTAGGGGGT > NC_014034/1748475‑1748670
|
cTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.cc.c > 1:5011630/1‑101 (MQ=255)
cTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.cc.c < 2:8437360/101‑1 (MQ=255)
cTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.cc.c < 2:4666513/101‑1 (MQ=255)
cTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.cc.c > 1:2027128/1‑101 (MQ=255)
cTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.cc.c < 2:7494699/101‑1 (MQ=255)
cTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.cc.c < 2:7360992/101‑1 (MQ=255)
gCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.C.ggg < 1:1459472/101‑1 (MQ=255)
cccTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.C.gggg > 2:7931023/1‑101 (MQ=255)
cTGCGCGGCGGAGCCTCCGGCGGAGGGATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.C.gggggg > 2:9185138/1‑100 (MQ=255)
tGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.C.ggggggc < 2:5523540/101‑3 (MQ=255)
tGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.C.ggggggc < 2:5090992/101‑3 (MQ=255)
tGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.C.ggggggc < 1:1385387/101‑3 (MQ=255)
gcgcGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.C.ggggggca < 1:8589508/101‑4 (MQ=255)
cggcggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACTGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAg.cg > 1:9094851/1‑101 (MQ=255)
cggcggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGGACC.G.GGGGG..CAg.cg > 1:8946476/1‑101 (MQ=255)
cggcggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAg.cg > 2:1065307/1‑101 (MQ=255)
gcggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGcc < 2:6472703/101‑1 (MQ=255)
gAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGccccc < 2:1996236/101‑1 (MQ=255)
aGCCTCGGGCGGAGTTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGcccccc < 1:3545219/101‑1 (MQ=25)
aGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGcccccc > 1:1040402/1‑101 (MQ=255)
ccGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCtt > 2:1212913/1‑101 (MQ=255)
cggcggAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTg > 2:299709/1‑101 (MQ=255)
ggcggAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGc > 2:8495246/1‑101 (MQ=255)
cggAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCtt > 1:6079350/1‑101 (MQ=255)
cggAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCtt > 1:8266501/1‑101 (MQ=255)
ggAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTc > 2:6371820/1‑101 (MQ=255)
aGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCgg > 2:8727729/1‑101 (MQ=255)
ggTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGc > 2:4525249/1‑101 (MQ=255)
gTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGcc > 1:1649000/1‑101 (MQ=255)
gTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGcc > 1:5466563/1‑101 (MQ=255)
gTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGcc > 2:8157362/1‑101 (MQ=255)
tATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCt > 2:8795765/1‑101 (MQ=255)
tATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCt > 1:941240/1‑101 (MQ=255)
aTTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCtt > 2:7441695/1‑101 (MQ=255)
ttAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGc > 2:2749587/1‑101 (MQ=255)
ttAGGGCAAGATGAAACGGTCCCCCTTCATCTTGCCTCAAATATCCG.GGGGGGGGG.CC.GCAGG.CCGG.GGGGG..CGG.CCCCCCCCGCCTTGCTTCGGCCttta < 2:2538010/101‑3 (MQ=25)
cAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTc > 1:2355717/1‑101 (MQ=255)
cAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTc > 2:3311633/1‑101 (MQ=255)
gATGAACCGGCCCCCTTCCATCTGCCCAC.AATACCCCGGGGGGGGGG.CC.GCGGC.CCGG.GGGGG..CGG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACg < 2:6997158/101‑1 (MQ=255)
aTGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGa > 1:7775658/1‑101 (MQ=255)
tGAAACGGTGCCCCTTCATCTTGCCTCAAATATACC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGaa > 1:6464221/1‑101 (MQ=255)
aaaaaCGGTGCCCCCTCATCCTTCCCCAAATTCCCG.GGGGGGAGGCCC.GCAGC.CG.G.GGGGGC.CGG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGa < 1:2708309/99‑1 (MQ=255)
gAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCCCGAAc > 2:4047589/1‑101 (MQ=255)
gAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAAc > 2:8952611/1‑101 (MQ=255)
aaccgtccccccTTCTTCTTGCCTAAAATGCCTG.GGGGGGAGC.CC.GCGGG.CCGG.GGGGG..CAC.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACt < 2:5011582/93‑1 (MQ=255)
aaaCGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACt > 2:2629370/1‑101 (MQ=255)
aaCGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACtt > 1:71364/1‑101 (MQ=255)
aaCGGGCCCCCTTCACCTTGCCCCAAATATCCC.GGGGGGAGC.CC.GCAGG.CC.CGGGGGG..CAG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACtt < 2:4207517/101‑1 (MQ=25)
cGGTGCCCCTTCCTCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGt > 1:8169526/1‑101 (MQ=255)
cGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGt > 1:4048157/1‑101 (MQ=255)
ggTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTc > 1:4943161/1‑101 (MQ=255)
tGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCAt > 1:5652009/1‑101 (MQ=255)
ccccccTTCTTCTTCCCTAAAACACCCG.GGGGGGGGC.CC.GCGGG.CCGG.GGGGG..CGG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCAt < 1:5860313/99‑1 (MQ=255)
gCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATc > 2:4819166/1‑101 (MQ=255)
ccccTCCATCTGCCCAAAAATCGCCG.GGGGGGGGG.CG.GCGGG.CC.G.GGGGGC.CCG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCg < 2:5374173/101‑1 (MQ=255)
ccTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCggg > 1:7871679/1‑101 (MQ=255)
cTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgc > 1:5325617/1‑101 (MQ=255)
ttCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgcg > 2:8235877/1‑101 (MQ=255)
ttCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgcg > 1:4671672/1‑101 (MQ=255)
cATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCt > 2:7709573/1‑101 (MQ=255)
ttCTTCCCTAAAATACCCG.GGGGGGAGG.CC.GCGGG.CC.C.GGGGGC.CAC.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCtt < 2:8901062/100‑1 (MQ=255)
ctCTTGCCTCAAATCCCCC.GGGGGGGGG.CC.GCGGG.CC.G.GGGGGC.CAG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCtt < 2:8301031/100‑1 (MQ=255)
aTCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCtt > 1:4474594/1‑101 (MQ=255)
ttggCCTAAAATACCCG.NGGGGGGGC.CC.GCGGC.CCGG.GGGGG..CCG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGa < 2:1304646/98‑1 (MQ=255)
cTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGa > 1:3707945/1‑101 (MQ=255)
tcgccaaaaaTACCCG.GGGGGGGGG.CC.GGCGG.CCGG.GGGGG..CCG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGaa < 2:8098650/94‑1 (MQ=255)
tGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAAc > 2:2372999/1‑101 (MQ=255)
tGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAAc > 1:4156939/1‑101 (MQ=255)
gCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAAcc > 1:5224294/1‑101 (MQ=255)
gCCTAAAATCCCCG.GGGGGGGGG.CC.GCGGG.CCGG.GGGGG..CAG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAAcc < 1:5123923/101‑1 (MQ=255)
cccaaaattCCG.GGGGGGGGG.GC.GCCGG.GC.C.GGGGGGCCGG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCt < 1:2823438/93‑1 (MQ=255)
cccAAATACCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAC.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCtt < 2:7322926/99‑1 (MQ=255)
cTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCtt > 2:2138323/1‑101 (MQ=255)
caaatcccccc.GGGGGGAGG.CC.GCGGG.CC.CGGGGGG..CAG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTc < 2:1480491/93‑1 (MQ=255)
caaaatcccc.GGGGGGGGGCCC.GCGGG.CCGG.GGGGG..CAG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTc < 1:782666/94‑1 (MQ=255)
cAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCCCTTGAACCTTCg > 2:5812562/1‑101 (MQ=255)
aaaTATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCgg > 2:6720904/1‑101 (MQ=255)
aaTATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGc > 2:6847319/1‑101 (MQ=255)
aaTATCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACCGCACGATCTTTTCAACGGGTGCTTGAActctttcc > 2:4144420/1‑94 (MQ=25)
atatCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcc > 2:3918876/1‑101 (MQ=255)
aatgccggggggggGGG.GC.GCGGC.CC.G.GGGNG..CCGCCCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGc < 1:971381/93‑1 (MQ=255)
tatCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGccc > 2:6546863/1‑101 (MQ=255)
tatCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGccc > 2:175012/1‑101 (MQ=255)
tcccc.GGGGGGGGG.CCGGCGGG.CC.G.GGGGGC.CCC.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGccc < 1:6829529/99‑1 (MQ=255)
tCCC.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCATTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGccccc > 2:4355822/1‑101 (MQ=255)
ccc.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcccccc > 1:8010100/1‑101 (MQ=255)
cc.GGGGGGAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGccccccc > 1:3378388/1‑101 (MQ=255)
cgggggggGGG.CC.GCGGG.CCGG.GGGGG..CGG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGccccccc < 1:3981101/99‑1 (MQ=255)
ggggggAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCcgc > 1:3030580/1‑101 (MQ=255)
ggAGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTa > 1:659791/1‑101 (MQ=255)
aGG.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTAcc > 2:3419387/1‑101 (MQ=255)
gg.CC.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCt > 1:6725325/1‑101 (MQ=255)
g.CC.GCGGG.CC.CGGGGGG..CAG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCTa < 2:621339/101‑1 (MQ=255)
c.GCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCTAgg > 1:4725631/1‑101 (MQ=255)
gCAGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCTAggg > 1:8492614/1‑101 (MQ=255)
aggg.CC.G.GGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCGCCCCCGCGCTACCTAggggg > 1:7205818/3‑101 (MQ=255)
aGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTCCCTAggggg > 1:1170511/1‑101 (MQ=255)
aGG.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCTAggggg > 2:3630414/1‑101 (MQ=255)
gg.CC.CGGGGGG..CCC.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCTAGGGGGt < 1:8779896/101‑1 (MQ=255)
gg.CC.CGGGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCTAggggga > 1:2457712/1‑100 (MQ=255)
|
CTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCC.GGGGGGAGG.CC.GCAGG.CC.C.GGGGG..CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCTAGGGGGT > NC_014034/1748475‑1748670
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|