BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,769,358	+G	100%	coding (430/744 nt)	RCAP_rcc01636 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,769,358	1	.→G	100.0%	1048.1	282	coding (430/744 nt)	RCAP_rcc01636	hypothetical protein
Reads supporting (aligned to +/- strand): new base (141/139): ref base (0/1): total (141/141)

Only 100 of 312 total aligned reads displayed.


GACGGGCTTTTGTGCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.C.GG..CA.GGGGCGGTGGTC.CC.CC.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGG  >  NC_014034/1769262‑1769446


gACGGGCTTTTGTGCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CA.ggg                                                                                          >  1:1580997/1‑101 (MQ=255)


 aCGGGCTTTTGTGCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CA.gggg                                                                                         >  2:2878278/1‑101 (MQ=255)


  cGGGCTTTTGTGCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CA.ggggg                                                                                        >  1:3279179/1‑100 (MQ=255)


    ggCTTTTGTGCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGTTCGATGT.CGGG..CA.gggggcg                                                                                      <  1:8224410/101‑4 (MQ=255)


        tttGTGCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCggtgg                                                                                   >  2:2242845/1‑101 (MQ=255)


        tttGTGCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CA.gggggcggcgg                                                                                  >  1:6938903/1‑94 (MQ=255)


         ttGTGCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CA.gggggcgggggt                                                                                 >  1:7813266/1‑93 (MQ=255)


          tgtgCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTc                                                                                 <  1:5848697/101‑1 (MQ=255)


          tgtgCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTc                                                                                 <  1:7431983/101‑1 (MQ=255)


           gtgCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGCTGT.CGGG..CAGGGGGCggtgggcg                                                                                >  1:8961727/1‑98 (MQ=255)


           gtgCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTcg                                                                                <  2:1647880/101‑2 (MQ=255)


                  aGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGTTGT.CGGG..CAGGGGGCGGTGGTcgcgcgcgg                                                                         >  1:3213819/1‑93 (MQ=255)


                   gCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTcgcgcgcggg                                                                        <  1:7949177/101‑10 (MQ=255)


                   gCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTcgcgcgcggg                                                                        >  1:8377968/1‑92 (MQ=255)


                    cGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTcgcgcgcgggc                                                                       <  1:6606478/101‑11 (MQ=255)


                    cGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTcgcgcgcgggc                                                                       >  1:4562884/1‑91 (MQ=255)


                    cGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTcgcgcgcgggc                                                                       >  2:4634842/1‑91 (MQ=255)


                      tCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCtt                                                                   >  2:7100900/1‑101 (MQ=255)


                       cGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCttt                                                                  >  1:229257/1‑101 (MQ=255)


                       cGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCttt                                                                  <  2:6326123/101‑1 (MQ=255)


                       cGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCttt                                                                  <  1:7331075/101‑1 (MQ=255)


                        ggCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTg                                                                 <  2:7926191/101‑1 (MQ=255)


                        ggCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTg                                                                 <  1:9144439/101‑1 (MQ=255)


                         gCGATCAGGACCAACGGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGc                                                                <  2:1515113/101‑1 (MQ=255)


                           gATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCt                                                              >  1:346395/1‑101 (MQ=255)


                           gATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCt                                                              <  1:2501264/101‑1 (MQ=255)


                           gATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCt                                                              >  2:2564982/1‑101 (MQ=255)


                           gATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTC.GCGCG.CGGGCTTTGCCt                                                              <  1:4876302/101‑1 (MQ=255)


                            aTCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCtt                                                             <  1:613155/101‑1 (MQ=255)


                              cAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTgg                                                           >  1:5102384/1‑101 (MQ=255)


                                 gtgcAACTGGAGGCGGCCCGCGCGGCGGAAAGCGTCGCGGCTGTGGGCGCGGTCGAGGT.CGGG..CAGGGGGCGGTGGGCGCG.CG.CGGGCTTTGCCTTGGGGt                                                        <  1:570800/98‑1 (MQ=255)


                                  aCCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTc                                                       >  1:3849712/1‑101 (MQ=255)


                                  aCCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTc                                                       <  1:5046039/101‑1 (MQ=255)


                                   ccAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCg                                                      <  1:2121386/101‑1 (MQ=255)


                                   ccAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCg                                                      <  1:2030183/101‑1 (MQ=255)


                                   ccAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCg                                                      <  1:156963/101‑1 (MQ=255)


                                    cAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGCCgg                                                     >  2:4999424/1‑100 (MQ=255)


                                    cAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGAG.CG.CGGGGTTTGCATTTGGGTCGa                                                     >  1:4240952/1‑101 (MQ=255)


                                     aaCTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGGGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAg                                                    >  1:1183347/1‑101 (MQ=255)


                                      aCTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGTGG.GG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAgg                                                   >  2:5228767/1‑101 (MQ=255)


                                       cTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGgc                                                  <  2:5695718/101‑1 (MQ=255)


                                        tGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGCTGT.C.GGGCCG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGGCGGGgcg                                                 >  2:4276397/1‑101 (MQ=255)


                                         ggATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGgcgc                                                <  1:7265400/101‑1 (MQ=255)


                                         ggATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGgcgc                                                >  2:1835612/1‑101 (MQ=255)


                                         ggATGCGGCCCGAGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGgcgc                                                >  1:8085953/1‑101 (MQ=255)


                                          gATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCt                                               <  1:1747413/101‑1 (MQ=255)


                                             gCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTcc                                            >  2:300109/1‑101 (MQ=255)


                                             gCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTcc                                            >  1:380397/1‑101 (MQ=255)


                                               ggCCGGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTC.GCGCG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCgg                                          <  2:659686/101‑1 (MQ=255)


                                                  ccGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCa                                       >  1:5366041/1‑101 (MQ=255)


                                                  ccGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCAGGCa                                       >  2:5816739/1‑101 (MQ=255)


                                                   cgcgcgGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTC.GC.GCGCGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCAc                                      <  1:8608086/101‑1 (MQ=255)


                                                    gcgcgGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCAcc                                     <  2:3324043/101‑1 (MQ=255)


                                                    gcgcgGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTC.GC.GCGCGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCAcc                                     <  1:1348844/101‑1 (MQ=255)


                                                     cgcgGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCg                                    >  1:4435961/1‑101 (MQ=255)


                                                     cgcgGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTC.GC.GCGCGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCg                                    <  2:6738155/101‑1 (MQ=255)


                                                       cggcggAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGAt                                  <  2:2074666/101‑1 (MQ=255)


                                                       cggcggAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGAt                                  >  2:8342229/1‑101 (MQ=255)


                                                       cggcggAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGAt                                  <  2:346387/101‑1 (MQ=255)


                                                       cggcggAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGAt                                  <  2:4031426/101‑1 (MQ=255)


                                                         gcggAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATgc                                <  1:7160568/101‑1 (MQ=255)


                                                          cggAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATgcg                               >  1:410837/1‑101 (MQ=255)


                                                           ggAAATCGTCGCGGCTTTTGGCCCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATgcgc                              <  2:4235925/101‑1 (MQ=255)


                                                           ggAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATgcgc                              >  1:1525910/1‑101 (MQ=255)


                                                            gtaaTCGTGGGGGTTGTGGGGGGGGTTGATGG.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCGTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCt                             <  1:5495520/99‑1 (MQ=255)


                                                            gAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCt                             <  1:2862438/101‑1 (MQ=255)


                                                            gAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCt                             <  1:3945981/101‑1 (MQ=255)


                                                            gAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCt                             <  1:4599638/101‑1 (MQ=255)


                                                             aaaTCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTc                            >  2:1939987/1‑101 (MQ=255)


                                                              aaTCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTcc                           >  2:2177440/1‑101 (MQ=255)


                                                              aaTCGTCGCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTcc                           >  1:5756270/1‑101 (MQ=255)


                                                                 cgtcgCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTg                        >  1:3389485/1‑101 (MQ=255)


                                                                 cgtcgCGGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTg                        <  1:3648572/101‑1 (MQ=255)


                                                                 cgtcgCGGCTTTGGGCGCGGTCGATGT.CAGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTg                        <  1:6391100/101‑1 (MQ=255)


                                                                    cgcgGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGAtt                     <  2:803643/101‑1 (MQ=255)


                                                                     gcgGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGAttt                    <  2:5432902/101‑1 (MQ=255)


                                                                     gcgGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGAttt                    <  2:5177885/101‑1 (MQ=255)


                                                                     gcgGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGAttt                    >  2:6178892/1‑101 (MQ=255)


                                                                     gcgGCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGAttt                    <  2:9016756/101‑1 (MQ=255)


                                                                        gCTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTtcgt                 >  1:4700323/1‑101 (MQ=255)


                                                                         cTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTtcgtc                >  1:8694108/1‑101 (MQ=255)


                                                                         cTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTtcgtc                >  1:7532864/1‑101 (MQ=255)


                                                                         cTTTGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTtcgtc                <  2:7576307/101‑1 (MQ=255)


                                                                          tttGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTtcgtcg               <  1:1819747/101‑1 (MQ=255)


                                                                            tGGGCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTcgcc             >  1:7739254/1‑101 (MQ=255)


                                                                             gggCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTcgccg            <  2:2714161/101‑1 (MQ=255)


                                                                              ggCGCGGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTcgccgc           >  1:2949797/1‑101 (MQ=255)


                                                                                 gcgGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCa        >  2:3265473/1‑101 (MQ=255)


                                                                                 gcgGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCa        >  2:7711091/1‑101 (MQ=255)


                                                                                  cgGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCAt       <  1:1265162/101‑1 (MQ=255)


                                                                                  cgGTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCAt       >  2:8512823/1‑101 (MQ=255)


                                                                                   ggTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATc      >  1:3533710/1‑101 (MQ=255)


                                                                                   ggTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATc      <  2:3681643/101‑1 (MQ=255)


                                                                                    gTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATcg     >  2:6862426/1‑101 (MQ=255)


                                                                                    gTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATcg     <  2:7899750/101‑1 (MQ=255)


                                                                                    gTCGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATcg     <  1:852235/101‑1 (MQ=255)


                                                                                      cGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATcgcg   >  2:8605303/1‑101 (MQ=255)


                                                                                      cGATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATcgcg   >  1:4325763/1‑101 (MQ=255)


                                                                                       gATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCgg  >  1:1005242/1‑101 (MQ=255)


                                                                                       gATGT.CGGG..CAGGGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCgg  >  2:6950907/1‑101 (MQ=255)


GACGGGCTTTTGTGCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATGT.C.GG..CA.GGGGCGGTGGTC.CC.CC.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGG  >  NC_014034/1769262‑1769446

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG