BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,769,370	+G	100%	coding (442/744 nt)	RCAP_rcc01636 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,769,370	1	.→G	100.0%	85.5	289	coding (442/744 nt)	RCAP_rcc01636	hypothetical protein
Reads supporting (aligned to +/- strand): new base (134/125): ref base (5/24): total (139/150)
Fisher's exact test strand distribution p-value = 3.53e-04
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.07e-01

Only 100 of 322 total aligned reads displayed.


TGTGCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TC.GG..C.A..GGGGCGGTGGTC.CC.CC.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGGGCTGGTGCCGATGCCG  >  NC_014034/1769272‑1769462


tgtgCGGCAGCGTCTGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTc                                                                                                 <  1:4704528/101‑1 (MQ=255)


tgtgCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTc                                                                                                 <  1:3232996/101‑1 (MQ=255)


 gtgCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTcg                                                                                                <  1:7472512/101‑2 (MQ=255)


  tgCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTcgc                                                                                               <  2:6522944/101‑3 (MQ=255)


   gCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTcgcg                                                                                              >  1:4256750/1‑98 (MQ=255)


     ggCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGGGGTcgcgcg                                                                                            >  2:5491738/1‑96 (MQ=255)


          cGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTcgcgcgcgggc                                                                                       >  1:4562884/1‑91 (MQ=255)


            tCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCtt                                                                                   >  2:7100900/1‑101 (MQ=255)


            tCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCtt                                                                                   <  1:1937579/101‑1 (MQ=255)


              ggCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTg                                                                                 <  2:2629673/101‑1 (MQ=255)


              ggCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTg                                                                                 <  1:9144439/101‑1 (MQ=255)


               gCGATCAGGACCAACGGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGc                                                                                <  2:1515113/101‑1 (MQ=255)


                cGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGcc                                                                               >  1:4621912/1‑101 (MQ=255)


                 gATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCt                                                                              >  1:659696/1‑101 (MQ=255)


                  aTCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCtt                                                                             <  1:6879803/101‑1 (MQ=255)


                   tCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTg                                                                            >  1:1646826/1‑101 (MQ=255)


                    cAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTgg                                                                           >  1:5102384/1‑101 (MQ=255)


                     aGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTGGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCCTggg                                                                          >  2:6268150/1‑101 (MQ=255)


                      ggACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTgggg                                                                         >  1:3092209/1‑101 (MQ=255)


                       gtgcAACTGGAGGCGGCCCGCGCGGCGGAAAGCGTCGCGGCTGTGGGCGCGGTCGAGG.TCGGG..C.AG.GGGGCGGTGGGCGCG.CG.CGGGCTTTGCCTTGGGGt                                                                        <  1:570800/98‑1 (MQ=255)


                        aCCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTC.GC.GCGCGGGCTTTGCCTTGGGGTc                                                                       <  2:5212236/101‑1 (MQ=255)


                         ccAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCg                                                                      <  1:2121386/101‑1 (MQ=255)


                          cAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTC.GCGCG.CGGGCTTTGCCTTGGGGTCGa                                                                     <  1:7337302/101‑1 (MQ=255)


                           aaCTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGGGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAg                                                                    >  1:1183347/1‑101 (MQ=255)


                              tGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGCTG.TC.GGGCC.G..GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGGCGGGgcg                                                                 >  2:4276397/1‑101 (MQ=255)


                              tGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGgcg                                                                 <  2:5781021/101‑1 (MQ=255)


                               ggATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGgcgc                                                                >  1:421168/1‑101 (MQ=255)


                                   gCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTcc                                                            <  2:1639815/101‑1 (MQ=255)


                                   gCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTC.GCGCG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTcc                                                            <  1:384760/101‑1 (MQ=255)


                                    cGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTC.GC.GCGCGGGCTTTGCCTTGGGGTCGAGGCGCTTCCg                                                           <  2:1774186/101‑1 (MQ=255)


                                        ccGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCa                                                       >  1:2526432/1‑101 (MQ=255)


                                         cgcgcgGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCAc                                                      >  2:7758457/1‑101 (MQ=255)


                                          gcgcgGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTC.GC.GCGCGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCAcc                                                     <  2:7930444/101‑1 (MQ=255)


                                          gcgcgGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTC.GC.GCGCGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCAcc                                                     <  2:4126104/101‑1 (MQ=255)


                                          gcgcgGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTC.GC.GCGCGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCAcc                                                     <  1:1348844/101‑1 (MQ=255)


                                           cgcgGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTC.GC.GCGCGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCg                                                    <  2:7920720/101‑1 (MQ=255)


                                           cgcgGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTC.GC.GCGCGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCg                                                    <  2:6738155/101‑1 (MQ=255)


                                             cggcggAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGAt                                                  <  2:346387/101‑1 (MQ=255)


                                             cggcggAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGAt                                                  >  2:8342229/1‑101 (MQ=255)


                                             cggcggAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGAt                                                  <  2:2074666/101‑1 (MQ=255)


                                              ggcggAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATg                                                 <  2:2916062/101‑1 (MQ=255)


                                               gcggAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATgc                                                <  1:4409293/101‑1 (MQ=255)


                                                 ggAAATCGTCGCGGCTTTTGGCCCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATgcgc                                              <  2:4235925/101‑1 (MQ=255)


                                                 ggAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATgcgc                                              <  1:402869/101‑1 (MQ=255)


                                                 ggAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATgcgc                                              >  2:7593191/1‑101 (MQ=255)


                                                 ggAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATgcgc                                              >  1:1525910/1‑101 (MQ=255)


                                                  gtaaTCGTGGGGGTTGTGGGGGGGGTTGATG.GCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCGTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCt                                             <  1:5495520/99‑1 (MQ=255)


                                                  gAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TC.GG..G.AAGGGGGCGGGGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCGGCGGTGCGCt                                             >  1:8336954/1‑101 (MQ=255)


                                                   aaaTCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTc                                            >  1:8731547/1‑101 (MQ=255)


                                                   aaaTCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTc                                            >  2:1939987/1‑101 (MQ=255)


                                                   aaaTCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTc                                            >  1:5344794/1‑101 (MQ=255)


                                                    aaTCGTCGCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTcc                                           >  2:2177440/1‑101 (MQ=255)


                                                     aTCGTCGGGGTTTTGGGCGCGGTCGTGG.TCGGG..CGG..GGGGGGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTC.AGGCGCTTCCGGGCACCGATGCGCTCCtt                                         <  1:5043295/101‑1 (MQ=255)


                                                       cgtcgCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTg                                        >  1:7973524/1‑101 (MQ=255)


                                                       cgtcgCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTg                                        >  2:4715105/1‑101 (MQ=255)


                                                       cgtcgCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTg                                        <  1:3648572/101‑1 (MQ=255)


                                                       cgtcgCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTg                                        <  1:1809664/101‑1 (MQ=255)


                                                       cgtcgCGGCTTTGGGCGCGGTCGATG.TCAGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTg                                        <  1:6391100/101‑1 (MQ=255)


                                                        gtcgCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGa                                       >  1:8161286/1‑101 (MQ=255)


                                                         tcgCGGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGAt                                      <  2:6100267/101‑1 (MQ=255)


                                                          cgcgGCTTTGGGCGCGGTCGATGTTG.GG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGAtt                                     >  1:2393379/1‑101 (MQ=255)


                                                          cgcgGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGAtt                                     <  1:7825402/101‑1 (MQ=255)


                                                          cgcgGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGAtt                                     >  2:5284889/1‑101 (MQ=255)


                                                          cgcgGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGAtt                                     <  2:36992/101‑1 (MQ=255)


                                                          cgcgGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGAtt                                     >  1:3358043/1‑101 (MQ=255)


                                                           gcgGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGAttt                                    <  2:9016756/101‑1 (MQ=255)


                                                            cgGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTtc                                   >  1:3793394/1‑101 (MQ=255)


                                                            cgGCTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTtc                                   >  2:3348841/1‑101 (MQ=255)


                                                               cTTTGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTtcgtc                                >  1:3461020/1‑101 (MQ=255)


                                                                tttGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTtcgtcg                               <  1:1819747/101‑1 (MQ=255)


                                                                  tGGGCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTcgcc                             >  1:7739254/1‑101 (MQ=255)


                                                                   gggCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTcgccg                            <  2:2714161/101‑1 (MQ=255)


                                                                   gggCGCGGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTcgccg                            >  1:7280628/1‑101 (MQ=255)


                                                                       gcgGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCa                        >  2:3265473/1‑101 (MQ=255)


                                                                        cgGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCAt                       <  1:1576793/101‑1 (MQ=255)


                                                                        cgGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCAt                       <  1:1265162/101‑1 (MQ=255)


                                                                        cgGTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCAt                       >  2:8512823/1‑101 (MQ=255)


                                                                         ggTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGGATc                      >  2:1189845/1‑101 (MQ=255)


                                                                         ggTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATc                      <  1:2242912/101‑1 (MQ=255)


                                                                         ggTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATc                      <  1:2878376/101‑1 (MQ=255)


                                                                         ggTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATc                      >  1:3533710/1‑101 (MQ=255)


                                                                          gTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATcg                     <  1:852235/101‑1 (MQ=255)


                                                                          gTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATcg                     >  2:4073420/1‑101 (MQ=255)


                                                                          gTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATcg                     <  2:5025988/101‑1 (MQ=255)


                                                                          gTCGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATcg                     >  2:6862426/1‑101 (MQ=255)


                                                                           tCGATG.TCGGG..C.AG.GGGGCGCTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATcgc                    <  1:7250127/101‑1 (MQ=255)


                                                                            cGATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATcgcg                   >  2:8605303/1‑101 (MQ=255)


                                                                             gATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCgg                  >  2:6950907/1‑101 (MQ=255)


                                                                             gATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCgg                  >  1:1005242/1‑101 (MQ=255)


                                                                             gATG.TCGGG..C.AG.GGGGCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCgg                  >  1:5773148/1‑101 (MQ=255)


                                                                                    tgtcgggcagggggCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGGGc                <  2:31428/91‑1 (MQ=255)


                                                                                     gtcgggcagggggCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGGGCt               >  2:3514980/10‑101 (MQ=255)


                                                                                      tcgggcagggggCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGGGCTg              <  2:818700/93‑1 (MQ=255)


                                                                                       cgggcagggggCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGGGCTgg             >  1:3970047/8‑101 (MQ=255)


                                                                                          gcagggggCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGGGCTGGtgc          <  1:6002669/97‑1 (MQ=255)


                                                                                           gagggggCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGGGCTGGtgcc         <  1:7631559/98‑1 (MQ=255)


                                                                                           cagggggCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGGGCTGGtgcc         >  2:5136252/4‑101 (MQ=255)


                                                                                              ggggCGGTGGTC.GCGCG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGGGCTGGtgccgat      >  1:8608798/1‑101 (MQ=255)


                                                                                               gggCGGTGGTCGCG.CG.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGGGCTGGtgccgatg     <  2:2234058/101‑1 (MQ=255)


                                                                                                 gCGGTGGTC.GC.GCGCGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACTGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGGGCTGGtgccgatgcc   >  1:5412430/1‑101 (MQ=255)


TGTGCGGCAGCGTCGGCGATCAGGACCAACTGGATGCGGCCCGCGCGGCGGAAATCGTCGCGGCTTTGGGCGCGGTCGATG.TC.GG..C.A..GGGGCGGTGGTC.CC.CC.CGGGCTTTGCCTTGGGGTCGAGGCGCTTCCGGGCACCGATGCGCTCCTTGATTTCGTCGCCGCGCATCGCGGGCTGGTGCCGATGCCG  >  NC_014034/1769272‑1769462

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG