Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 1,813,101 | +G | 100% | intergenic (+145/‑73) | glnA3 → / → fabD | glutamine synthetase/ACP S‑malonyltransferase |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 1,813,101 | 1 | .→G | 100.0% | 21.1 | 244 | intergenic (+145/‑73) | glnA3/fabD | glutamine synthetase/ACP S‑malonyltransferase |
Reads supporting (aligned to +/- strand): new base (172/60): ref base (0/12): total (172/72) | ||||||||||
Fisher's exact test strand distribution p-value = 2.18e-07 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.23e-09 |
Only 100 of 328 total aligned reads displayed.
TTTTGCCGGGGTGCGACTGCGACTCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCTCGGGGGTCCGGCGGCGC.GA.A.CGCCCGGCGGCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATGGGTGTTCC > NC_014034/1813001‑1813195
|
ttttGCCGGGGTGCGACTGCGACTCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.Ga.a > 2:9143183/1‑101 (MQ=255)
ttttGCCGGGGTGCGACTGCGACTCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.Ga.a < 1:9049652/101‑1 (MQ=255)
ttttGCCGGGGTGCGACTGCGACTCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.Ga.a > 1:7086274/1‑101 (MQ=255)
ttGCCGGGGTGCGACTGCGACTCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.Ga.agc < 1:8909262/101‑3 (MQ=255)
tGCCGGGGTGCGACTGCGACTCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.Ga.agcc < 1:6779035/101‑4 (MQ=255)
gCCGGGGTGCGACTGCGACTCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.Ga.agccc < 1:8668395/101‑5 (MQ=255)
cGGGGTGCGACTGCGCCTCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.Ga.agccccc < 1:3524689/101‑7 (MQ=37)
cGGGGTGCGACTGCGACTCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.Ga.agccccc > 2:2360771/1‑95 (MQ=38)
ggggTGCGACTGCGACTCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.Ga.agcccccg > 2:1816066/1‑94 (MQ=38)
ggTGCGACTGCGACTCTTTGCGTATTGGAGCCAAGAAAAGCCCC.GGCGTTTTTTCTTGGTTCAAATCCGCCGCGGGGGTCCGGGGGCCC.GA.AGCCCCcggc < 2:3523450/101‑1 (MQ=25)
tgcgactgcgacTCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCcggcgc > 2:550369/1‑100 (MQ=37)
gactgcgactCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCcggcgcttc > 1:4784964/1‑97 (MQ=25)
cgactCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGtt > 2:1430243/1‑101 (MQ=25)
cgaccgtttGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATCCGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGtt < 2:7351341/95‑1 (MQ=21)
gactCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTg > 1:1952048/1‑101 (MQ=25)
ctctTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCt > 2:6342285/1‑101 (MQ=25)
ctctTGGCGTTTTTGAGCCAAGAAAAACCCC.GGCTTTTTTTCTTGGTTCAAATGCGCCGCGGGGGTCGGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCt < 2:5722990/101‑1 (MQ=16)
tctTTGCGTATTTGAGCCAAGAAAAACCCC.GGCTCTTTTTCTTGGTTCAAATCCGCCGGGGGGGTCGGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTc < 1:5841911/101‑1 (MQ=21)
ctTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTcc > 1:2416895/1‑101 (MQ=25)
ctTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTcc > 1:8414560/1‑101 (MQ=25)
tttGCGTATTTGAGCCAAGAAAAACCCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCg < 2:2544551/101‑1 (MQ=25)
tttGCGTATTGGA.CCAAAAAAAAACCCGGGCGTTTTTTTTTGGTTAAAAGCCGCCGGGGGGGCCGGGGGGCGC.GA.A.CCCCCCGGCGCTTCCGGTTGCTCCg < 1:1712726/101‑1 (MQ=255)
ttGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCgg > 1:7491697/1‑101 (MQ=25)
gCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGAc > 2:7423843/1‑101 (MQ=25)
tATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGCGGA.G.CCCCCGGC.GCTCCCGGTTGCGCCGGACGcg > 2:6768173/1‑100 (MQ=21)
tATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCt > 2:1519233/1‑101 (MQ=25)
tttggAGCCAAGAAAAACCCC.GGCCTTTTTTCTTGGTTCAAATCCGCCGCGGGGGTCCGGGGGCGC.GA.A.CCCCCCGGCGCTTCCGGTTGCTCCGGACGCTg < 2:8497502/97‑1 (MQ=21)
aTTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTg > 1:7801212/1‑101 (MQ=25)
aTTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTg > 2:6575606/1‑101 (MQ=25)
ttggacccAAGAAAAACCCG.GGCTTTTTTTCTTGGTTCAAAACCGCCGGGGGGGTCGGGGGGCGC.GA.C.CCCCCCGGCGCTTCCGGTTGCTCCGGACGCTGc < 1:4934410/95‑1 (MQ=255)
gAGCCAAGAAAAACCCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.A.CCCCCCGGCGCTTCCGGTTGCTCCGGACGCTGCGTc < 1:5405631/101‑1 (MQ=25)
gccaGAAAAAACCC.GCCGCTTTTTCTTGGTTCAAATCCGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAg < 2:2923382/98‑1 (MQ=21)
caaaaaaaaacCCC.GGCGTTTTTTCTTGTTTAAAATCCGCGGCGGGGGTCGGGGGGCGC.GACG.CCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAg < 1:3980040/96‑1 (MQ=255)
aaGAAAAGCCCC.GGCGCTTTTTTTTGTTACAAATCCGCCGCGGGGGTCGGGGGGGGC.AA.A.CCCCCCGGCGCTTCCGGTTGCTCCGGACGCTGCGTCAAGtt < 1:4032782/101‑1 (MQ=255)
aaGAAAAAACCC.GGCGCTTTTTCTTGGTGCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGtt > 1:4437348/1‑101 (MQ=25)
aGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTa > 2:7070968/1‑101 (MQ=25)
aaaaccccgc.GGCGTTTTTTTTTGGTAAAAACCCGCGGGGGGGGGCGGGGGCCGC.AA.G.CCCCCCGGCGCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTag < 2:2110523/92‑1 (MQ=255)
aaaaaacCCC.GGCGCTTTTTCTTGGTTCAAATACGCCGGGGGGGTCGGGGGGCGC.GAGG.CCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTag < 2:3815164/100‑1 (MQ=25)
aaaaaaCCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTaga > 1:3817178/1‑101 (MQ=37)
aaaaaaCCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTaga > 1:8537387/1‑101 (MQ=25)
aaaaaCCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTagag > 2:6923162/1‑101 (MQ=25)
aaacCCC.GGCCTTTTTTCTTGGTTCAAATCCGCCGGGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAgaga < 2:1377055/101‑1 (MQ=21)
aaaCCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGaa > 2:1280429/1‑101 (MQ=25)
ccccc.GCCGTTTTTTCTGGGTAAAAATGCGCGGGGGGGGGCGGGGGCCGC.AA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAg < 2:4501085/99‑1 (MQ=255)
aaCCC.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAg > 2:227544/1‑101 (MQ=25)
ccgggccTTTTTTTTGGTTCAAACCCGCCGGGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGcc < 2:1187937/95‑1 (MQ=19)
c.GGCGCTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCa > 1:2158958/1‑101 (MQ=25)
ggCGCTTTTTCTGGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGCTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAg > 1:8075839/1‑101 (MQ=25)
cgttttttCTGGGTTCAAATCCGCCGGGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGAt < 2:5407584/98‑1 (MQ=25)
gcTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGAtt > 1:1178527/1‑101 (MQ=25)
gcTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGAtt > 1:6010849/1‑101 (MQ=25)
ttttttCTGGGTTAAAAGCCGCGGGGGGGGTCGGGGGGCGC.GA.A.CCCCCCGGCGCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGAttt < 1:924776/100‑1 (MQ=255)
cTTTTTCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGAttt > 2:1914480/1‑101 (MQ=25)
ttcttCTGGGTCCAAAGACGCCGGGGGGGCCCGGGGCGGC.GA.A.CCCCCCGGCGCTTCCGGTTGCTCCCGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTg < 2:8907908/98‑1 (MQ=255)
tttCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTc > 1:3683001/1‑101 (MQ=25)
tttCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTc > 2:8799915/1‑101 (MQ=25)
tttCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTc > 1:636847/1‑101 (MQ=25)
tttCGTGGTTAAAATCCGCGGCGGGGGCCCGGGGGCGC.AA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTc < 2:5101456/101‑1 (MQ=19)
ttCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCa > 1:5699067/1‑101 (MQ=25)
ttCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCa > 1:2559409/1‑101 (MQ=25)
tCTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCaa < 1:1039279/101‑1 (MQ=25)
cTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAag < 2:7148128/101‑1 (MQ=25)
cTTGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCAAGATTTGTCAag > 2:4596344/1‑101 (MQ=25)
cTTGGTCCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAag < 1:8710334/101‑1 (MQ=25)
ttGGTTCAAATACGCCGGGGGGGTCCGGGGTCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAagg < 1:6575866/101‑1 (MQ=25)
tGGTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAagga > 2:6063564/1‑101 (MQ=25)
ggTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAaggag > 2:7267744/1‑101 (MQ=25)
ggTTCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAaggag > 1:7970451/1‑101 (MQ=25)
tCAAATACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCACCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCg > 2:757969/1‑101 (MQ=25)
cAAATACGCCGCGGGGGTCCGGGGTCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCgg > 1:3036766/1‑101 (MQ=25)
aaaTACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCggg > 1:6216871/1‑101 (MQ=37)
aaaTACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTGGTCAAGGAGGCggg > 1:4086467/1‑101 (MQ=25)
aaTCCGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGc < 2:4953408/101‑1 (MQ=25)
aaTACGCCGCGGGTGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGc > 1:1199104/1‑101 (MQ=37)
aaTACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGc < 2:8692535/101‑1 (MQ=37)
aaTACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGc > 1:1743505/1‑101 (MQ=37)
tccgcggggggggGCGGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCAt < 1:8246114/93‑1 (MQ=255)
tACGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCAt > 2:8302975/1‑101 (MQ=37)
cGCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGa < 2:2709899/101‑1 (MQ=37)
gCCGCGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAg < 2:2754665/101‑1 (MQ=37)
cgggggggCCGGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCg < 1:5038407/98‑1 (MQ=255)
gcGGGGGTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGt > 1:5185620/2‑101 (MQ=37)
ggggTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGc > 2:3966346/1‑101 (MQ=38)
ggggCCCGGGGGCGC.GAGG.CCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGc < 1:2707592/101‑1 (MQ=255)
ggTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCAt > 1:7680040/1‑101 (MQ=38)
ggcggggggcgC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATg < 1:3763356/94‑1 (MQ=255)
gTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATg > 2:6969885/1‑101 (MQ=38)
gTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATg < 2:5908613/101‑1 (MQ=38)
gTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATg > 1:3207594/1‑101 (MQ=38)
gTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATg > 1:9185767/1‑101 (MQ=38)
gTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATg < 2:4723349/101‑1 (MQ=38)
gTCCGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATg > 2:5336165/1‑101 (MQ=38)
ccGGGGGCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATggg > 2:1086664/1‑101 (MQ=255)
cgggggCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATgggg > 1:3434733/1‑100 (MQ=255)
cgggggCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATGGgt > 1:1425501/1‑101 (MQ=255)
cgggggCGC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATGGgt > 2:9025247/1‑101 (MQ=255)
cgggggCGC.GA.A.CCCCCCGGCGCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATGGgt < 2:78483/101‑1 (MQ=255)
gggggcgC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATGGgtg > 2:3222949/4‑101 (MQ=255)
gggggcgC.GA.AGCCCCCGGC.GCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATGGgtg > 2:4069489/4‑101 (MQ=255)
ggcgC.GA.A.CCCCCCGGCGCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATGGGTGTTc < 2:2453194/101‑1 (MQ=255)
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TTTTGCCGGGGTGCGACTGCGACTCTTTGCGTATTTGAGCCAAGAAAAAACCC.GGCGCTTTTTCTTGGTTCAAATACGCCTCGGGGGTCCGGCGGCGC.GA.A.CGCCCGGCGGCTTCCGGTTGCTCCGGACGCTGCGTCAAGTTAGAGAAGGCCAGATTTGTCAAGGAGGCGGGCATGAGCGTGGCATGGGTGTTCC > NC_014034/1813001‑1813195
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 28 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|