| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,867,833 | +C | 100% | intergenic (‑235/+80) | RCAP_rcc01729 ← / ← RCAP_rcc01730 | pyridine nucleotide‑disulfide oxidoreductase/U32 family peptidase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,867,833 | 1 | .→C | 100.0% | 47.0 | 213 | intergenic (‑235/+80) | RCAP_rcc01729/RCAP_rcc01730 | pyridine nucleotide‑disulfide oxidoreductase/U32 family peptidase |
| Reads supporting (aligned to +/- strand): new base (83/113): ref base (0/17): total (83/130) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.66e-04 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.19e-01 | ||||||||||
Only 100 of 359 total aligned reads displayed.
GAAAAGCACTGCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CG.C.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCAGCGCCGCGGCCAA > NC_014034/1867733‑1867928
|
aaagGCACTGCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCCGCCCCCCCGGCGCGA.AAg.cg.c > 1:7228357/1‑101 (MQ=37)
aaaaGCACTGCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAg.cg.c > 1:1849241/1‑101 (MQ=255)
aaaaGCACTGCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCCCCCCCCCCGGCGCGA.AAg.cg.c > 1:2395189/1‑101 (MQ=37)
aaGCACTTCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.cg.c.cc < 2:6945992/101‑2 (MQ=255)
aaGCACTGCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.cg.c.cc < 1:4628952/101‑2 (MQ=255)
aaGCACTGCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.cg.c.cc < 1:7917447/101‑2 (MQ=255)
aGCACTGCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.cg.c.ccg < 2:2578442/101‑3 (MQ=255)
aGCACTGCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.cg.c.cca > 2:3769928/1‑99 (MQ=255)
aGCACTGCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.ag.c.ccc > 2:4035051/1‑99 (MQ=255)
aGCACTGCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCCGCGGCGCGG.CAG.cg.c.ccc > 1:2875203/1‑99 (MQ=255)
aCTGCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCAGCCCCCGCGGGGCGC.AAA.cg.c.ccgccc > 2:1255415/1‑96 (MQ=37)
tGCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCAGCCCCCGCGGCGCGA.AAG.cg.c.ccgccctg > 1:5266033/1‑94 (MQ=37)
gCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCCGCCCCCGCGGCGCGA.AAG.cg.c.ccgccacgg > 2:6526280/1‑93 (MQ=25)
cTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCAGCCCCCGCGGCGCGA.AAG.Cg.c.cccccctggg > 1:7469807/1‑95 (MQ=37)
ttttCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGGCCGCACCCCCGCCGCCGCGC.AAG.Cg.c.cccccccggcc > 1:2952468/1‑94 (MQ=25)
ttttCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAAGGCCCCGCCCCCGCGGCTCGA.AAG.Cg.c.cccccctgggg > 1:5608283/1‑94 (MQ=25)
ttttCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCCCCCCCCGCGGCGCGA.AAG.Cg.c.ccccccccggc > 1:4048121/1‑94 (MQ=25)
ttCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCCC.AAA.CGCC.CCCCACgggcgg > 1:165911/1‑101 (MQ=25)
ttCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAAAGCCCAGCCCCCGCGGCGCGC.AAG.Cg.c.ccccccagggcgg > 1:2700811/1‑92 (MQ=255)
ttCCACGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCACgggcgg > 2:7905923/1‑101 (MQ=21)
tCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCACCCCCCGCGGCGCGA.AAA.Cg.c.cccccccgggcggg > 1:2588419/1‑91 (MQ=25)
ccccGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCTCGA.AAG.CGCC.CGCCATgggcgggg < 2:4383742/101‑1 (MQ=255)
gcccgTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGgcggggc.ggg < 2:1492293/101‑1 (MQ=255)
gcccgTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCCGCGGCGCGA.AAG.CGCC.CGCCCTGGgcggggc.ggg > 1:102573/1‑101 (MQ=21)
gcccgTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAAGGCCCCGGCCCCGCGGCGCGG.AAA.CG.CGCGCCCCGGgcggggg.ggg > 1:7807789/1‑101 (MQ=255)
gcccgTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCAGCCCCCGCGGCGCGC.AAG.AGCC.CCCCATGGgcggggg.ggg > 2:263940/1‑101 (MQ=255)
cgTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGgcgc < 1:7533737/101‑1 (MQ=255)
cgTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGAGCCCCCCCCCCGCGGCGCGC.AAA.CGCC.CGCCATGGGGGGGGC.GGgggc > 1:7609516/1‑101 (MQ=255)
gtgtCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAAAGCCCAGCCCCGGCGGCGCGG.AAA.CGCC.CGCCATGGGCGGGGC.GGgggcc > 1:3245450/1‑100 (MQ=21)
tgtCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGgcgccg > 1:7348370/1‑99 (MQ=255)
gACAGCGTTGCAAAGCCCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.g < 2:8343406/101‑1 (MQ=255)
ccgggCGGTGCCAAGACCGTTTCCCCAGGCGCAGCAGAGGCCGGCGCCC.GCCCCGGCGG.GCGAGAAG.CGCC.CGCCATGGGCGGGGC.GGGGGCGGGGC.GC.gg > 2:4943987/5‑101 (MQ=18)
cGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCAGCCCCCGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGCGGGGGGCGGGCC.GG.GGGcc > 1:3601163/1‑101 (MQ=17)
gTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGGGCCGGGC.CA.GGGCCtt > 1:4546003/1‑101 (MQ=18)
gTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCCGGCC.GC.ggggcct > 1:618073/1‑97 (MQ=17)
ttGCAAACACCGCCTCCCAAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCttt < 2:7348046/101‑1 (MQ=17)
gCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCCGGGC.GA.GGGCCctttg > 2:7622219/1‑99 (MQ=17)
cAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAACGCCCAGCCCCCGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCCGGCC.GAGGGGCCTTTgg > 1:2098986/1‑101 (MQ=17)
agcccGCAGCCCCAAGCGGGCGGGAGCCCGGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGcc < 1:7366659/98‑1 (MQ=14)
agcccGCACCCCCAAGCGCGCGAGAGGCCGGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGcc < 1:1350824/98‑1 (MQ=17)
aGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCCGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCCGGGC.CA.GGGCCCTTGGGGcc > 1:5710906/1‑101 (MQ=17)
aGACCGCACCCCCAGGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGcc < 1:3064577/101‑1 (MQ=17)
gcccGCATCCCCAGGCGCGCGAGAGGCCAGCCCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGccc < 1:6742398/99‑1 (MQ=17)
ccccacccccAAGCGCGCGAGGGGCCGGCGCCCAGCCCGGGCGGCGCGA.ACG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGccccc < 2:5014647/95‑1 (MQ=14)
ccGCCTCCCCAACCGCGCGAGAGCCCAGCCCCCAGCCCCGGCGGCGCGA.AAGCCC.C.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGccccc < 2:4229418/101‑1 (MQ=17)
ccGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCGGGGC.GA.GGGGCCTTGGGGgcccc > 2:606385/1‑101 (MQ=17)
cGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCcg < 2:2453407/101‑1 (MQ=255)
cGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCCGGCC.CAGGGGCCTTTGGGGccccc > 2:7459849/1‑101 (MQ=17)
cGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCCGCGGCGCGA.AAA.CGCC.CGCCCTGGGCGGGGC.GGGCGCCGGCC.CAGGGGCCTTTGGGGccccg > 2:7544814/1‑100 (MQ=17)
gCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCCTGGGCGGGGG.GGGGGCCGGCC.GAGGGGCGTTTGGGGCCCCcg > 2:8212263/1‑101 (MQ=17)
cATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCCGGGC.GAGGGGCTTTTGGGGCCCCcgg > 1:5062971/1‑101 (MQ=17)
cATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCCGCGGCGCGA.AAG.CGCC.CGCCCTGGGCGGGGG.GGGGGCCGGCC.GC.GGGCCCTTGGGGGCCCccgc > 2:1176146/1‑101 (MQ=17)
aTCCCCAAGCGCGCGAGAGGCCAACGCCCAGCCCCGGCGGCGCCA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCGGGGC.GAGGGGCCTTGGGGGCCCCcgcg > 2:2893548/1‑99 (MQ=17)
tCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGGGGGGC.GGGGGCGGGGC.GC.GGGCCCTTGGGGGCCCccgcgg > 1:3777007/1‑101 (MQ=17)
cccAGGCGCGCGAGGGGCCAGCGCCCAGCCCGGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTc < 2:1950187/101‑1 (MQ=17)
ccAAGGGCGCGAGAGCCCAGCGCCCAGCCCGGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCa < 2:591928/101‑1 (MQ=17)
ccAAGCGCGCGAGAGGCCAGCGCCCAGCCCCCGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCCGGCCGGC.GGGCCTTTGGGGCCCCcgccgtca > 2:1696370/1‑98 (MQ=17)
caaggccggcgAGGGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCa < 2:5496728/93‑1 (MQ=14)
aaGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GAGGGGCCTTTGGGG.CCCCGGCGGGCAgg > 2:5813560/1‑101 (MQ=17)
aaGCGCGCGAGAGGCCAGCGCCCAGCCCCCGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCCGGGC.GAGGGGCCTTTGGGGCCCCC.GCGGGCAgg > 2:4056370/1‑101 (MQ=17)
gcgcgAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGa < 2:2680858/101‑1 (MQ=255)
ccgcgAGGGGCTGGCGCCCGGCCCGGGGGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGa < 1:8862055/100‑1 (MQ=14)
gcgAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGGCCCCCGCGGGCCGGGGGGTc > 2:3018669/1‑101 (MQ=14)
gcgAGAGCCCGGCCCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGTGGATc < 2:6228154/101‑1 (MQ=17)
gagaGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCCTTGGGGGCCCCGGCGGGCCGGGGGATCTg > 2:3907581/1‑101 (MQ=17)
agagGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGGGCCGGCC.GA.GGGCCTTTTGGGCCCCCGGCGGGCACGGGGGTCTGt > 2:2249990/1‑101 (MQ=14)
ggggCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGtt < 2:4545868/99‑1 (MQ=255)
gagGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGtt < 2:6422246/101‑1 (MQ=255)
gggccgccccccAGCCCCGGCGCCGCGA.AAGCCC.C.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTg < 2:3260394/92‑1 (MQ=17)
agGCCAGCGCCCGGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTg < 1:5410368/101‑1 (MQ=255)
agGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTg > 1:8377249/1‑101 (MQ=255)
ggCCAGCGCCCGGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTgc < 2:3601055/101‑1 (MQ=255)
ggCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGGTCTGTTgc > 1:2778723/1‑101 (MQ=255)
gCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTgcg > 1:7022183/1‑101 (MQ=255)
cAGCGCCCAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCa > 2:1015753/1‑101 (MQ=255)
ggcccccAGCCCCGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCAt < 1:4203016/97‑1 (MQ=255)
gcccccGGCCCGGGCGGCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATg < 2:8852472/98‑1 (MQ=18)
gcccccGGCCCGGGCGGCGCAA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATg < 2:8788410/98‑1 (MQ=18)
gcccccAGCCGCGGCGGCCCAA.AAGCCC.C.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATg < 2:8462520/98‑1 (MQ=18)
cccAGCCCCGGCGGCGCGA.AGGCCC.C.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGcc < 2:6701875/101‑1 (MQ=18)
cccAGCCCCGGCGGCGCGA.ACG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGcc < 2:2944984/101‑1 (MQ=255)
ccccGGCGGGGCGA.AAC.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTc < 1:353247/101‑1 (MQ=18)
ccccGGCGGCGGGA.ACGCCC.C.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTc < 2:7709547/101‑1 (MQ=18)
ccccGGCGGCGCGA.AGGCCC.C.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTc < 2:7180819/101‑1 (MQ=18)
ccccGGCGGCCCGG.AAG.CGCC.CGCTATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGGCAGGGGGATCTGTTGCGCCTGGCcgcgcc > 2:3115187/1‑99 (MQ=18)
ccggggggcgGGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCa < 1:6777289/95‑1 (MQ=18)
ccgggcggcGCGA.AAGCCC.C.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCa < 1:8599741/98‑1 (MQ=21)
ccgggcgccGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCa < 2:5597060/98‑1 (MQ=21)
cggcggCGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCGTGGCCGCGTCAgc > 1:15798/1‑101 (MQ=255)
ggcggcGCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCAgcg > 1:2625389/1‑101 (MQ=255)
cggcgCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCAGcgcc > 2:8509117/1‑101 (MQ=255)
cggcgCGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCAGcgcc > 2:5222056/1‑101 (MQ=255)
gcgcGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCAGcgccgc > 2:3354270/1‑101 (MQ=255)
gcgcGA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCAGcgccgc > 1:8730524/1‑101 (MQ=255)
cgcgA.AGG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCAGCGCcgcg < 2:7047553/101‑1 (MQ=255)
gcgA.AAG.CGCC.CGCCATGGGCGGGGC.GGCCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCAGCGCCGCgg > 1:6530863/1‑101 (MQ=255)
cgA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCCGCGCCGCGGc > 2:8982442/1‑101 (MQ=255)
gA.AAG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGGCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCAGCGCCGCGGcc > 1:4233680/1‑101 (MQ=255)
aaG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCAGCGCCGCGGCCaa < 2:8041277/101‑1 (MQ=255)
aaG.CGCC.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCAGCGCCGCGGCCaa > 2:7265545/1‑101 (MQ=255)
|
GAAAAGCACTGCTTTTCCCCGCCCGTGTCGCGACAGCGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCAGCGCCCAGCCCCGGCGGCGCGA.AAG.CG.C.CGCCATGGGCGGGGC.GGGCGCTGGCC.GA.GGGCCTTTGGGGCCCCCGGCGGTCAGGGGGATCTGTTGCGCATGGCCGCGTCAGCGCCGCGGCCAA > NC_014034/1867733‑1867928
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|