| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,098,585 | +G | 98.1% | coding (52/1491 nt) | RCAP_rcc01939 → | polysaccharide biosynthesis protein family |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,098,585 | 1 | .→G | 98.1% | 4.4 ‑1.7 ‑2.0 | 265 | coding (52/1491 nt) | RCAP_rcc01939 | polysaccharide biosynthesis protein family |
| Reads supporting (aligned to +/- strand): new base (115/145): ref base (4/1): total (119/146) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.77e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.01e-02 | ||||||||||
Only 100 of 384 total aligned reads displayed.
TTCGAAGGCGGTCTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCC.G.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGTCATCACCCT > NC_014034/2098485‑2098682
|
ttCGAAGGCGGTCTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCCGCGGG.CGT.cccc > 1:4101399/1‑101 (MQ=255)
ttCGAAGGCGGTCTGGCGCCTGCACGGCACCCGCACGTTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.cccc < 1:6689351/101‑1 (MQ=255)
ttCGAAGGCGGTCGGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.cccc < 1:2103471/101‑1 (MQ=255)
tCGAAGGCGGTCTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGG.CCCC.g > 1:3632553/1‑101 (MQ=255)
cGAAGGCGGTCTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGG.CCCC.gg > 1:1590953/1‑100 (MQ=255)
gAAGGCGGTCTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCC.ggc > 2:1654691/1‑99 (MQ=255)
gAAGGCGGTCTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCC.ggc > 1:1803613/1‑99 (MQ=255)
gAAGGCGGTCTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCC.ggc > 2:3980609/1‑99 (MQ=255)
aaGGCGGTCTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGTGCCCC.G.cc > 2:8813179/1‑100 (MQ=255)
aaGGCGCTCTGGCGCCTTCACGGCCCCCGCACAGTATAGGGGACAGTGGCAGCCCTTGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCC.ggct < 2:2827385/101‑4 (MQ=255)
ggCGGTCTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCC.ggctcc < 2:4601532/101‑6 (MQ=255)
gCGGTCTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.TCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCg < 1:6464475/101‑1 (MQ=255)
gCGGTCTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.CGC.CCCC.ggccccg > 1:4482617/1‑95 (MQ=255)
ggTCTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.cc > 2:8196235/1‑101 (MQ=255)
gTCTGGCCCCTTCACGGCCCCCGTATGGAACAGGGGACAGTGGCAGCCTATGCCCAGCTTTTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.ccc < 1:6779257/101‑1 (MQ=255)
cTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCgg < 1:8177235/101‑1 (MQ=255)
tGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGTCCCCC.G.CTCCG.CCCggg > 1:4911761/1‑101 (MQ=255)
gcgcCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGcc < 1:7989087/101‑1 (MQ=255)
ccTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCACGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.CGT.CCCCGG.CGCCG.CCCGGGCCCGc > 1:3227526/1‑101 (MQ=255)
cTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGcc < 2:6990332/101‑1 (MQ=255)
ttCACGGCACCCGCCCAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCcg < 2:2418796/101‑1 (MQ=255)
tCACGGCCCCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCcgc < 2:7728883/101‑1 (MQ=255)
cACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGG.CCCCGG.CTCCC.CCCGGGCCAGCcgcg > 2:1235654/1‑101 (MQ=255)
cACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCCCCGCGGCGGC.GGG.CCCCGG.CTCCG.CCCGGGCCCGCcgcg > 1:3093469/1‑101 (MQ=255)
cGGCNCCCGCACAGTATANNGNACAGTGGCAGCCCATNNNCAGCGATTTG.CCCCCCCCCGCCGCGNNNGC.GGT.CCCCGG.CTCCG.CCCGNGCCCGCCGCggc > 2:8073288/1‑100 (MQ=255)
ggCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGAc > 1:2411477/1‑101 (MQ=255)
gCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGG.CCCCGG.CTCCG.CCCCGGCCAGCCGCGGAcg > 1:1180159/1‑101 (MQ=255)
cGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGAcggcgcg < 1:6360970/101‑1 (MQ=255)
cGCAAAGTAGGGGGGACGGGGGCCGCCCATGCCCAGCTTTTCC.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGAcggcgcg < 2:9106836/101‑1 (MQ=255)
cacaGTATAGGGTACAGTTTCGCCCCATGATCGGCGATTTG.CCCCCCCCCACCGCGGCGTC.GGA.CCCCGG.ATCCG.CCCGGGCCAGCCGCGGAcggcgcggc < 1:9142161/101‑1 (MQ=255)
cacaGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCCGGccgcgcggc > 1:6036515/1‑101 (MQ=255)
caGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG..CCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGAcggcgcggcgcg < 1:911817/101‑1 (MQ=255)
tataGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGAcggcgcggcgcggc < 1:551595/101‑1 (MQ=255)
tagaGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGAcggcgcggcgcggc < 1:2040824/98‑1 (MQ=255)
ataGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGAcggcgcggcgcggcg > 2:6503822/1‑101 (MQ=255)
aGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCCCCGCGGCGGC.GGG.CCCCGG.CTCCG.CCCGGGCCCGCCGCGGGcggcgcggcgcggccgg > 2:4394267/1‑98 (MQ=255)
ggggACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCCGCCGCGGACGGCGCGGCgcggcggcg > 1:7675719/1‑101 (MQ=255)
ggACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCCCCGCGGCGGC.GGG.CCCCGG.CTCCG.CCCGGGCCCGCCGCGGACGGCGCCGCgcggcgggggt > 2:2246408/1‑97 (MQ=255)
aCAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGAGCt > 1:3432921/1‑101 (MQ=255)
gagggccAGCCCATGAGCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCtt < 2:5152481/95‑1 (MQ=255)
cAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCgcggcggggcgctt > 2:3321034/1‑94 (MQ=255)
cAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCCCCGCGGCGGCGGGC.CCCC.G.CCCCG.CCCGGGCCCGCCCCCGGCGGGCCCGGgcggcggggggctt > 2:1905815/1‑94 (MQ=255)
ggtgcctgCCCTTGTCCGGCGTTTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTc < 2:1599475/94‑1 (MQ=255)
cttGGCGGCCCATGCCCAGCGATTTC.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTc < 1:1427129/99‑1 (MQ=255)
aGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTc < 1:4306173/101‑1 (MQ=255)
tGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCCGGCGGCGCGGCGCGGCGGCGCTCTTcag > 2:1427097/1‑99 (MQ=255)
gcgCCCCTGCCCCGGGATTTGCCCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCt < 2:5432819/99‑1 (MQ=255)
ggCCCATGCCCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCttt < 2:8267043/100‑1 (MQ=255)
cccATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGGGGTCTTCGCCTTTgc > 1:8581369/1‑100 (MQ=255)
ccATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTc > 1:263006/1‑101 (MQ=255)
cATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGTCCCCC.G.CTCCG.CCCGGGCCAGCCGCGGGCGGCGCGGCGCCGCGGCGAGCTTCCGCTTTGTcg > 2:4121472/1‑101 (MQ=255)
cATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGGTCTTCGCCCTTGTcg > 2:4922247/1‑101 (MQ=255)
tgcccggcaaTTTG.CCCCCCCCCGCCGCGGNGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTcgcg < 1:8813584/92‑1 (MQ=255)
cgACCTGCGATTTG.CCCCCCCCCCCCGCGGCGGC.GGG.CCCG.G.CCGCGCCCCGGGCCGCCCGCCGCGCCCGCGCGGCGGGGGCGGGCTTCGCCTTTGTcgcg > 2:4521894/2‑101 (MQ=255)
aCCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGGGCGGCGGCGGTCTTCGGCTTTGTtgcgcg > 2:7117556/1‑101 (MQ=255)
ccgggATTTC.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCggg < 1:1063670/97‑1 (MQ=255)
aGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGc > 1:5401834/1‑101 (MQ=255)
gCGATTGC.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCg < 2:6336585/101‑1 (MQ=255)
gCGATTCG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCg < 2:3375668/101‑1 (MQ=255)
gcgtttcccccccccccGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCg < 2:4482482/93‑1 (MQ=255)
gATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGAc > 2:5982843/1‑101 (MQ=255)
ttttG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACg < 1:3469228/100‑1 (MQ=255)
aTTCG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACg < 2:5707362/101‑1 (MQ=255)
tttgccccccccccGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACg < 2:6703780/96‑1 (MQ=255)
tG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGGTCTTCGCCTTTGTCGCGCCGGCGACgcag > 2:3787997/1‑101 (MQ=255)
tG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACgcag < 2:319573/101‑1 (MQ=255)
ccccccccccGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACgcagc < 1:387700/100‑1 (MQ=255)
ccccccccGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGcagcag > 1:7477924/1‑101 (MQ=255)
ccccccccGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGcagcag < 2:1180141/101‑1 (MQ=255)
cccccccGCCGCGGCGGC.GGT.CCCCGG.CTCCG.CCCGTGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCagcagc < 1:6521584/101‑1 (MQ=255)
cccccGCCGCGGCGGC.GGC.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCtt < 2:4732788/101‑1 (MQ=255)
cccGCCGCGGCGGC.GGC.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTc < 1:1294353/101‑1 (MQ=255)
ccgccgCGTCGGC.GGC.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCg < 2:7277981/101‑1 (MQ=255)
ccgccgCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCg < 1:5608843/101‑1 (MQ=255)
ccgccgCGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCg < 2:2009079/101‑1 (MQ=255)
cgccgcGGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCgc > 2:4287329/1‑100 (MQ=255)
cgcgGCGGC.GGT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCt > 1:8268739/1‑101 (MQ=255)
gggcgcc.ggC.CCCC.GCCCCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCttt < 2:2936270/100‑1 (MQ=255)
ggcggc.ggT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTg > 1:1683863/1‑101 (MQ=255)
ggcggc.ggT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTg < 1:3963426/101‑1 (MQ=255)
gcgccgcgccccg.G.CCCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGt < 1:2925074/92‑1 (MQ=255)
cggc.ggT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGtc < 2:2341092/101‑1 (MQ=255)
c.ggT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGtcatc < 1:2326122/101‑1 (MQ=255)
c.ggT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGtcatc > 1:3786807/1‑101 (MQ=255)
c.ggT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGtcatc > 2:5326088/1‑101 (MQ=255)
c.ggT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGtcatc > 1:5929088/1‑101 (MQ=255)
ggT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGtcatca > 2:662641/1‑101 (MQ=255)
ggT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGtcatca < 1:6949918/101‑1 (MQ=255)
ggT.CCCCGG.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGtcatca < 2:3562104/101‑1 (MQ=255)
gtccccg.G.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGTCATCAc < 2:8035801/98‑1 (MQ=255)
gtccccg.G.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCACCTTTCGACCTTTGTCATCAc > 1:7242184/4‑101 (MQ=255)
gtccccg.G.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGAGCGACGCAGCAGCTTTCGACCTTTGTCATCAc > 1:4676062/4‑101 (MQ=255)
tccccg.G.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGTCATCAcc > 1:352256/3‑101 (MQ=255)
tccccg.G.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGTCATCAcc < 1:1726458/99‑1 (MQ=255)
cccccg.G.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGTCATCAcc < 1:4802451/99‑1 (MQ=255)
cccg.G.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGTCATCACCct < 2:867976/101‑1 (MQ=255)
cccg.G.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGTCATCACCct < 2:7477600/101‑1 (MQ=255)
cccg.G.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGTCATCACCct < 1:986693/101‑1 (MQ=255)
cccg.G.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGTCATCACCct < 1:3325336/101‑1 (MQ=255)
cccg.G.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGTCATCACCct < 1:7848275/101‑1 (MQ=255)
|
TTCGAAGGCGGTCTGGCGCCTTCACGGCACCCGCACAGTATAGGGGACAGTGGCAGCCCATGACCAGCGATTTG.CCCCCCCCCGCCGCGGCGGC.GGT.CCCC.G.CTCCG.CCCGGGCCAGCCGCGGACGGCGCGGCGCGGCGGCGATCTTCGCCTTTGTCGCGCGGGCGACGCAGCAGCTTTCGACCTTTGTCATCACCCT > NC_014034/2098485‑2098682
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|