| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,135,154 | +C | 99.0% | intergenic (‑148/+63) | RCAP_rcc01974 ← / ← RCAP_rcc01975 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,135,154 | 1 | .→C | 99.0% | 4.5 ‑0.4 ‑1.2 | 512 | intergenic (‑148/+63) | RCAP_rcc01974/RCAP_rcc01975 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (248/259): ref base (3/2): total (251/261) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.80e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.88e-02 | ||||||||||
Only 100 of 573 total aligned reads displayed.
ACTTATGGTCAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGA.G.GG.CCAAAGTTCAAAGG.C.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGACAC > NC_014034/2135055‑2135249
|
aCTTATGGTCAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAgg > 1:4403286/1‑101 (MQ=255)
ttATGGTCAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGG.c.c > 1:4056733/1‑101 (MQ=255)
ttATGGTCAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGG.c.c > 2:5915154/1‑101 (MQ=255)
tATGGTCAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGG.c.cc > 2:4536418/1‑101 (MQ=255)
tATGGAAAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGG.c.cc < 1:7002856/101‑1 (MQ=255)
aggtgaaaGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGG.c.ccc < 1:220485/95‑2 (MQ=255)
tGGTAAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGG.c.cccg < 1:6114454/101‑3 (MQ=255)
gttCAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGG.c.cccgc > 1:469724/3‑98 (MQ=255)
ggTGAAGCCATTAAAGTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGG.c.cccgc > 1:8832222/1‑98 (MQ=255)
tCAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGG.c.ccctctt > 1:8952509/1‑96 (MQ=255)
cAAGCCATTACATTGCGTTTATAGCAACTTTGCTTCCGCGTCGATTCCGGGAAGCTTAGAAACGAGGGCTTTGAGG.GG.CCAAAGTTCAAAGG.CACC.GCttt > 2:5617342/1‑101 (MQ=255)
cAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCttt < 2:2818906/101‑1 (MQ=255)
aaGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTc > 1:375547/1‑101 (MQ=255)
aaGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGAGGGGTTTGAGG.GG.GCAAAGGTCAAAGG.c.cccagcttc > 2:4234163/1‑94 (MQ=255)
aGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTcc < 1:7403217/101‑1 (MQ=255)
gCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCa < 1:1573539/101‑1 (MQ=255)
ccATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAg < 1:6412903/101‑1 (MQ=255)
cATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGA.C.CCGGCTTTccggg > 2:8946775/1‑98 (MQ=255)
ttAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCgg > 1:3118281/1‑101 (MQ=255)
tAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCggg > 2:6990817/1‑101 (MQ=255)
tAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCggg > 1:8655364/1‑101 (MQ=255)
aaTTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGc > 2:7321218/1‑101 (MQ=255)
aaTTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGc > 2:6592891/1‑101 (MQ=255)
gTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAggg > 2:7914689/1‑101 (MQ=255)
tATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGcg > 1:2439254/1‑101 (MQ=255)
tATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGcg > 2:1618333/1‑101 (MQ=255)
tATCGCAACTTTACTTCCGCGTCGATTCATGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGcg > 1:8084847/1‑101 (MQ=255)
tCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGcgac < 1:1060444/101‑1 (MQ=255)
cAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCgacgac < 2:133791/101‑1 (MQ=255)
aaCTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGacgacg > 2:106340/1‑101 (MQ=255)
aaCTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGacgacg > 1:3471259/1‑101 (MQ=255)
cTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGt > 1:1388670/1‑101 (MQ=255)
gCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAg > 2:5312163/1‑101 (MQ=255)
ttCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGc < 1:1229645/101‑1 (MQ=255)
tCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCa < 2:1146771/101‑1 (MQ=255)
gcgTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAg > 2:3214842/1‑101 (MQ=255)
cgTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGc > 2:2090315/1‑101 (MQ=255)
gTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCa > 1:7516803/1‑101 (MQ=255)
gTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCa < 1:1921918/101‑1 (MQ=255)
cGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGCAGGCAAAGCAAc > 1:9061058/1‑101 (MQ=255)
gATTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACt < 2:2439181/101‑1 (MQ=255)
aTTCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTg > 1:3010230/1‑101 (MQ=255)
ttCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGt < 2:7688630/101‑1 (MQ=255)
ttCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGt > 2:4165754/1‑101 (MQ=255)
ttCGTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGt < 2:8291873/101‑1 (MQ=255)
tCGTGGAAGCTTCGACACGCGGGCTTTGA.GTGG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTc < 2:9165337/101‑1 (MQ=255)
gTGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGc > 1:5395284/1‑101 (MQ=255)
tGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCt > 1:5246186/1‑101 (MQ=255)
tGGAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCt < 2:255466/101‑1 (MQ=255)
ggAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTa > 2:5806193/1‑101 (MQ=255)
gAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTAc > 1:6782187/1‑101 (MQ=255)
gAAGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTAc > 1:6486796/1‑101 (MQ=255)
aaGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACt < 1:8401963/101‑1 (MQ=255)
aGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTg < 1:5039458/101‑1 (MQ=255)
aGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTg < 2:3471155/101‑1 (MQ=255)
aGCTTCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTg > 2:39086/1‑101 (MQ=255)
ttCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATc < 1:7661970/101‑1 (MQ=255)
ttCGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATc > 2:9027726/1‑101 (MQ=255)
cGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTa < 2:6201810/101‑1 (MQ=255)
cGACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTa < 1:5912190/101‑1 (MQ=255)
gACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAg < 1:4919273/101‑1 (MQ=255)
gACACGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAg < 1:6847469/101‑1 (MQ=255)
acacGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGa < 2:5112117/101‑1 (MQ=255)
acacGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGa > 2:2656517/1‑101 (MQ=255)
acGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGata < 2:4353130/101‑1 (MQ=255)
acGCGGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGata < 1:716000/101‑1 (MQ=255)
gcgGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGAtata < 1:2835236/101‑1 (MQ=255)
gcgGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGAtata < 2:4785614/101‑1 (MQ=255)
cgGGCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATaa > 2:6097054/1‑101 (MQ=255)
cgGGCTTTGAGG.GG.CCAAAGATCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATaa > 1:8225797/1‑101 (MQ=255)
gggCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAAt > 1:3653982/1‑101 (MQ=255)
gggCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAAt < 2:8734001/101‑1 (MQ=255)
ggCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAAtt < 1:4225930/101‑1 (MQ=255)
ggCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTACAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAAtt > 2:8533693/1‑101 (MQ=255)
ggCTTTGAGG.GG.CCAAAGTTCAAAGG.CTCC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAAtt < 2:6336870/101‑1 (MQ=255)
gCTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTc > 2:3663596/1‑101 (MQ=255)
cTTTGAGG.GG.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTcc < 2:4682113/101‑1 (MQ=255)
ttgagg.gg.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTGCGc > 1:2919717/6‑101 (MQ=255)
tgagg.gg.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGcc > 1:5664612/5‑101 (MQ=255)
tgagg.gg.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGcc < 2:3118182/97‑1 (MQ=255)
tgagg.gg.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGcc > 2:1940637/5‑101 (MQ=255)
tgagg.gg.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGcc > 2:1752889/5‑101 (MQ=255)
tGA.G.GGTCCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGcc < 2:952748/101‑1 (MQ=255)
gagg.gg.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCa < 1:9190079/98‑1 (MQ=255)
gagg.gg.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCa < 2:8154862/98‑1 (MQ=255)
gagg.gg.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCa > 2:7504664/4‑101 (MQ=255)
agg.gg.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCaa > 1:7962240/3‑101 (MQ=255)
agg.gg.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCaa > 2:7079980/3‑101 (MQ=255)
agg.gg.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGAGATACTTCCACCaa > 2:6826050/3‑101 (MQ=255)
g.gg.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATg < 2:5049311/101‑1 (MQ=255)
gg.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGt < 2:4019331/101‑1 (MQ=255)
g.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGtt < 1:388200/101‑1 (MQ=255)
g.CCAAAGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGtt < 1:6693674/101‑1 (MQ=255)
aaaGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCt < 1:7845256/101‑1 (MQ=255)
aGTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCg < 1:4577406/101‑1 (MQ=255)
gTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCgg > 2:6704256/1‑101 (MQ=255)
gTTCAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCgg < 2:2270311/101‑1 (MQ=255)
cAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGaca < 1:2712751/101‑1 (MQ=255)
cAAAGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGaca < 1:4802187/101‑1 (MQ=255)
aaaGGCC.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGacac < 1:3275460/101‑1 (MQ=255)
|
ACTTATGGTCAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGA.G.GG.CCAAAGTTCAAAGG.C.CC.GCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGACAC > NC_014034/2135055‑2135249
Base quality scores:
ATCG
< 3 ≤
ATCG
< 25 ≤
ATCG
< 32 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|