Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 2,185,841 | +C | 100% | intergenic (+114/‑391) | mtlK → / → RCAP_rcc02028 | mannitol 2‑dehydrogenase/FeoA family protein |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 2,185,841 | 1 | .→C | 100.0% | 29.4 | 286 | intergenic (+114/‑391) | mtlK/RCAP_rcc02028 | mannitol 2‑dehydrogenase/FeoA family protein |
Reads supporting (aligned to +/- strand): new base (56/216): ref base (12/2): total (68/218) | ||||||||||
Fisher's exact test strand distribution p-value = 8.81e-07 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.77e-07 |
Only 100 of 339 total aligned reads displayed.
CCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.G.CC.CCGCACCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCGCCCCTTTC > NC_014034/2185741‑2185938
|
ccGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.g < 2:303561/101‑1 (MQ=255)
ccGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.g < 2:599679/101‑1 (MQ=255)
ccGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.g < 1:2640547/101‑1 (MQ=255)
ccccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.G.cc.c < 1:2890514/101‑1 (MQ=255)
cccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.G.cc.cc > 1:7502340/1‑101 (MQ=255)
ggAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGGCTCGGCGGTGCCGAGGCGGCCCT.GCCGGGG.GTCC.G.cc.ccccc > 1:8757038/1‑98 (MQ=255)
ggAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.GGGC.G.cc.ccccc > 2:5837590/1‑98 (MQ=255)
ggAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.G.cc.cccgc < 2:1316728/101‑4 (MQ=255)
cAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCAccc > 2:3616814/1‑101 (MQ=255)
cAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCAccc < 2:8751181/101‑1 (MQ=255)
ggcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCAccccc < 1:1890990/101‑1 (MQ=255)
ggcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCAccccc < 2:4600430/101‑1 (MQ=255)
ggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGGCGGGGG.GGCG.G.CC.CCCCCcccccccc > 2:7634368/1‑99 (MQ=255)
ggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.GCCC.C.CC.CCCCCCCCCCCCGc > 2:1044777/1‑101 (MQ=255)
ggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCAcccccggc < 2:8451086/101‑4 (MQ=255)
ccctGCCCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGt < 1:1530718/101‑1 (MQ=25)
cccGCTCCCTCCCGGGCGGGGCCGCCTGAGGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTa < 2:3524516/101‑1 (MQ=37)
cccGCCCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGCTTCGCCGCGGCGGTGCCGAGGCGGCCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTa < 1:3741853/101‑1 (MQ=25)
ccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTAt < 2:6688422/101‑1 (MQ=255)
ccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTAt < 1:1438919/101‑1 (MQ=255)
cGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTAtt < 1:1700236/101‑1 (MQ=255)
gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.GGCC.C.CC.CCCCCccccccccccggcct > 1:4466497/1‑92 (MQ=255)
gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTAttt < 2:5045566/101‑1 (MQ=255)
gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTAttt < 1:3854301/101‑1 (MQ=255)
gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTAttt < 1:2761755/101‑1 (MQ=255)
tccctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTAt > 1:5877391/1‑101 (MQ=255)
ccctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATc > 2:1925662/1‑101 (MQ=255)
tcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCa < 1:325794/101‑1 (MQ=255)
gcacgggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCa < 2:2313097/98‑1 (MQ=25)
ccccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCa < 1:4980453/100‑1 (MQ=37)
ccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAg < 1:896304/101‑1 (MQ=255)
gggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGaa < 1:7657064/101‑1 (MQ=255)
gggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGaa < 1:6071998/101‑1 (MQ=255)
gggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGaa < 2:8891196/101‑1 (MQ=255)
gggcgggGCCGCCTGATGTGCAAAGCGGTTTCCCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGaa < 2:5012369/101‑1 (MQ=37)
ggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGaaa < 1:6286762/101‑1 (MQ=255)
ggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGaaa < 2:4037967/101‑1 (MQ=255)
ggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGaaa < 2:6353094/101‑1 (MQ=255)
cgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGaaaaa < 1:9083003/101‑1 (MQ=255)
cgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGGATTTATCCCCAGaaaaa > 2:8362892/1‑101 (MQ=25)
cgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.G.CC.CCCCCACCCCCGGCGGCTTTCTCCCAAGaaaac > 2:4129114/1‑100 (MQ=38)
gggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.GTCCGG.CC.CCGC.CCCCCCCGCGGAGTTTTCCCAAAaaaaaac > 2:1698911/1‑99 (MQ=255)
gggCCGCCTGATGTGCAAAGAGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAATagc < 1:7225092/101‑1 (MQ=25)
ccgccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAagcagc < 1:1044795/101‑1 (MQ=255)
gccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.C.GC.CCCCCCCCCCCCGCCCGCTTCTCCCCAGAAAAAACATCgg > 1:1975252/1‑101 (MQ=255)
cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCt > 2:3211401/1‑101 (MQ=255)
tGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCtt < 2:5983650/101‑1 (MQ=255)
gATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTg < 2:5263518/101‑1 (MQ=255)
aTGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.c < 2:6266412/101‑1 (MQ=255)
tgtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.cc > 1:5595224/1‑101 (MQ=255)
tgggCAAAGCGGTTCCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.cc < 2:8613603/98‑1 (MQ=37)
tgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTT.cccc > 2:661592/1‑101 (MQ=37)
gCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.ccccc > 2:4858045/1‑100 (MQ=37)
cAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCTAAGAAAAAGCAGCGGCTTG.ccccca > 2:1608474/1‑99 (MQ=25)
aaGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CGCCGCAg > 2:8780057/1‑101 (MQ=25)
aaGCGGATTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCGTG.CCCCGAAg < 1:7592382/101‑1 (MQ=25)
cGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.GTCC.GCCC.CCGCACCCCCC.GCGTATTTATCCCAAGAAAAAGCAGCGGCTTT.TCCCCCAGGcc > 2:8063213/1‑101 (MQ=25)
gTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCtt < 1:8602482/101‑1 (MQ=255)
tttCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTg < 2:6283744/101‑1 (MQ=255)
ttCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTGt < 1:2374156/101‑1 (MQ=255)
tCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTGtt < 2:4727475/101‑1 (MQ=255)
cGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.GTCC.C.CC.CCCCCACCCCCCGCGTCTTTATCCCAAGGGAAAGCAGCCGCTTGTTCCCCAGGGCCTTGtt > 2:7391823/1‑101 (MQ=255)
cGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTGttt < 2:7186453/101‑1 (MQ=255)
cGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTGttt < 1:4029983/101‑1 (MQ=255)
cTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTGttttga < 1:1671789/101‑3 (MQ=37)
cggcggTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTGttttgatg < 2:5797282/101‑5 (MQ=37)
ggcggTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATgg < 1:892719/101‑1 (MQ=37)
ggcggTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCCAACGCCTTG.TTTTGATgg > 1:5312410/1‑101 (MQ=25)
gcggTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGc < 1:6468212/101‑1 (MQ=37)
gcggTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGc < 1:3149765/101‑1 (MQ=37)
ggTGCCTGGGCTGCCCT.GCGGGGG.CTCC.G.CC.CCCGCCCCCCCGGCGTATTTATCCCAAGAAAAACCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGcac < 2:8958308/101‑1 (MQ=25)
ggTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTGTTTTT.ATGGcac > 1:5437922/1‑101 (MQ=37)
gTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGcaca < 1:6841069/101‑1 (MQ=37)
gTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGcaca < 1:8363255/101‑1 (MQ=37)
gTGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGcaca < 1:6202262/101‑1 (MQ=37)
tGCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACaa < 2:1969184/101‑1 (MQ=37)
ggCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACaa < 1:3398429/100‑1 (MQ=25)
gCCGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAg < 1:2082181/101‑1 (MQ=37)
ctgAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGa < 1:8280973/99‑1 (MQ=25)
cccagccGACCCT.GCGGGGGCCCCC.C.CC.CCGCA.CCCCCGGCTTATTTATCCCAAGAAAAAGCACCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGa < 1:4297419/95‑1 (MQ=21)
ccGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGa < 1:1755735/101‑1 (MQ=37)
ccGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGa < 1:5821578/101‑1 (MQ=37)
ccGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGa < 1:8072611/101‑1 (MQ=37)
ccGAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCCAAGGCCCTGTTTTT.ATGGGCCAAGa > 1:4852373/1‑101 (MQ=21)
gAGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGaaa < 2:4308917/101‑1 (MQ=37)
aGGCGACTCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAc < 2:7810987/101‑1 (MQ=25)
aGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAc < 1:1245244/101‑1 (MQ=37)
aGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAc < 2:705523/101‑1 (MQ=37)
aGGCGACCCT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAc < 1:6685120/101‑1 (MQ=37)
gagccT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCg < 2:4419971/98‑1 (MQ=25)
gACCCT.GCGGGGG.CTCC.G.CCGCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.TCGCGAAAGGCTTG.TTTTGATGGCGCAAGaaagacag > 2:2907315/1‑96 (MQ=18)
cT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAcc < 2:7260769/101‑1 (MQ=37)
cT.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAcc < 1:464783/101‑1 (MQ=37)
t.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCg < 1:7972348/101‑1 (MQ=37)
t.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCg < 1:659274/101‑1 (MQ=37)
t.GCGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCg < 2:6026185/101‑1 (MQ=37)
cGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGcc < 2:2401195/101‑1 (MQ=37)
cGGGGG.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAAGCCGAACCGcc > 1:4740188/1‑101 (MQ=25)
ggggg.CTCC.GCCC.CCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGccc > 2:6808705/1‑101 (MQ=37)
cTCC.G.CC.CCCGCCCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCcttt < 1:6876111/101‑2 (MQ=38)
|
CCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCT.GCGGGGG.CTCC.G.CC.CCGCACCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTG.CCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCGCCCCTTTC > NC_014034/2185741‑2185938
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|