| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,391 | +C | 95.9% | intergenic (‑187/‑118) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,391 | 1 | .→C | 95.9% | 37.5 ‑1.2 ‑0.8 | 394 | intergenic (‑187/‑118) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (204/172): ref base (11/5): total (216/178) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.11e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.59e-01 | ||||||||||
Only 100 of 468 total aligned reads displayed.
TGCCGGGACTCCCCCGGGATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTCC > NC_014034/2249291‑2249486
|
tGCCGGGACTCCCCCGGGATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.cg < 1:1165148/101‑1 (MQ=255)
ccGGGACTCCCCCGGGATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cc > 2:7204361/1‑101 (MQ=255)
gggACTCCCCCGGGATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cc.cc > 1:1470428/1‑101 (MQ=255)
cTCCCCCGGGATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cc.cccctt > 1:56779/1‑98 (MQ=255)
cTCCCCCGGGATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cc.cccctt < 2:2776742/101‑4 (MQ=255)
tCCCCCGGGATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cc.ccccttc < 1:771031/101‑5 (MQ=255)
tCCCCCGGGATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cc.ccccttc < 2:1281900/101‑5 (MQ=255)
tCCCCCGGGATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTGGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cc.ccccttc < 2:1735425/101‑5 (MQ=255)
cccccGGTATATTTGCGGCAAGATGAAGTGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG.CC.CCCt < 2:8937294/101‑1 (MQ=2)
cccccGGGATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cc.ccccttcg < 2:1464103/101‑6 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTcgc < 1:8837916/101‑1 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTcgc > 2:6221132/1‑101 (MQ=255)
cccGGGATATTTGAGGCAAGATGAAGGGG..GGCTCTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGTGGGGCAG.CGCCC.CCCTTcgcg > 1:6446734/1‑101 (MQ=25)
cGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG.CC.CCCtgccc > 1:4744183/1‑97 (MQ=0)
gggATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCgcgggc < 2:4394653/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCgcgggc > 2:3383730/1‑101 (MQ=255)
tatTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGcc > 2:3705213/1‑101 (MQ=255)
tatTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGcc < 1:3496917/101‑1 (MQ=255)
ttGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCcgcg > 2:5853825/1‑101 (MQ=255)
ttGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCcgcg < 2:7677818/101‑1 (MQ=255)
tGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGa > 1:965530/1‑101 (MQ=255)
ggCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGAcgc < 1:1319276/101‑1 (MQ=255)
cAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGAcgcgc < 2:469638/101‑1 (MQ=255)
cAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGAcgcgc > 2:559713/1‑101 (MQ=255)
gATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGcgcc > 2:2293595/1‑101 (MQ=255)
gATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGcgcc > 2:8188126/1‑101 (MQ=255)
aaGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:6865349/1‑101 (MQ=255)
aaGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGAGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:6966749/1‑101 (MQ=255)
aGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 2:7557792/1‑101 (MQ=255)
aGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 1:578997/1‑101 (MQ=255)
aGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCCAc > 2:7373864/1‑101 (MQ=37)
gg..gcCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCCC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAgg < 1:4226183/101‑1 (MQ=37)
g..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAggc > 1:5012030/1‑100 (MQ=255)
g..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGt > 2:8374043/1‑101 (MQ=255)
ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTc < 1:7633419/101‑1 (MQ=255)
ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTc > 2:6327927/1‑101 (MQ=255)
ggCGTTCATCTGCCCGAAAATATCGCGGGGGGTGAA.TGGCGCA..GCGAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTc < 2:1852102/101‑1 (MQ=37)
gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCg > 2:2052331/1‑101 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 2:2085355/101‑1 (MQ=255)
ttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGc > 2:6634731/1‑101 (MQ=255)
ttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGc < 1:4126757/101‑1 (MQ=255)
aTCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcccc > 2:5970751/1‑101 (MQ=255)
tCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGGCGTGCCCCt > 1:6734588/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 2:2621048/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt < 1:5483855/101‑1 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 1:826460/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 2:3901468/1‑101 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 1:8448028/101‑1 (MQ=255)
tGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTg > 2:1101625/1‑101 (MQ=255)
gCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGt > 2:6578709/1‑101 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCTTGCCCCTTTGTc < 1:6630177/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 2:1336230/101‑1 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt < 1:3216960/101‑1 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt < 1:537564/101‑1 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt < 2:5073078/101‑1 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc > 2:3216955/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 1:7456494/101‑1 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc > 2:5333992/1‑101 (MQ=255)
aaTATCCCGGGGGGTGAA.TGTCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt < 1:7204665/101‑1 (MQ=255)
aaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt < 1:168561/101‑1 (MQ=255)
tatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGt > 1:6919818/1‑101 (MQ=255)
tgcccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc < 2:2944002/99‑1 (MQ=255)
tCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCg < 1:3667832/101‑1 (MQ=255)
tCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCg < 2:4592916/101‑1 (MQ=255)
cGGGGGCTGAA.TGGGGAA..GCTAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc < 2:5507599/101‑1 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc < 2:8787034/101‑1 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 2:3603947/1‑101 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCCTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa > 2:8004797/1‑101 (MQ=255)
gggaTGAA.TGGCGCA..GCCAGAGGGGGCCAG.CGCCC.CCCTTCGCGGGCGCCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa < 1:2402349/101‑1 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:1937563/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 2:5881813/1‑101 (MQ=255)
gTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGt < 2:4758918/101‑1 (MQ=255)
tGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc > 2:4106283/1‑101 (MQ=255)
tGAA.TGGCGCA..GCCAGAGGGGGCCAG.GGCCC.CCCTCCGCGGGCGGCCGCGGCGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc < 1:2692013/101‑1 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa < 2:7866986/101‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:7945283/101‑1 (MQ=255)
aagggCGCA..GCCAGAGGGGGGCCG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:3306121/98‑1 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa > 2:4861592/1‑101 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 1:2049720/101‑1 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 2:8597677/101‑1 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa > 1:2255843/1‑101 (MQ=255)
agggCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 1:6240183/99‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 2:2488691/1‑101 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 1:4361087/1‑101 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 1:6282056/101‑1 (MQ=255)
ggCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCaagat > 1:5295185/1‑97 (MQ=255)
ggCGCA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 1:9158566/101‑1 (MQ=255)
ggCGCA..GCCAGAGGGGGGCAG.CG.CCTCCCTGCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 2:1532035/101‑1 (MQ=255)
gcA..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTg > 1:3831310/1‑101 (MQ=255)
a..GCCAGAGGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTTGc > 2:9118275/1‑101 (MQ=255)
agagGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:7142746/1‑101 (MQ=255)
agagGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 1:3035056/1‑101 (MQ=255)
agGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATc > 1:8518632/1‑101 (MQ=255)
agGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATc < 1:6029791/101‑1 (MQ=255)
agGGGGGCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATc > 1:1024218/1‑101 (MQ=255)
ggggggCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCg > 1:7329918/1‑101 (MQ=255)
ggggggCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCg < 1:4861752/101‑1 (MQ=255)
ggggCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGAt < 1:8726684/101‑1 (MQ=255)
ggCAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGt < 1:7855400/101‑1 (MQ=255)
cAG.CGCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTcc < 1:2890739/101‑1 (MQ=255)
|
TGCCGGGACTCCCCCGGGATATTTGAGGCAAGATGAAGGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTCC > NC_014034/2249291‑2249486
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|