| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,566,557 | +C | 99.0% | intergenic (+29/+165) | purD → / ← sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,566,557 | 2 | .→C | 99.0% | 3.1 ‑1.2 ‑0.2 | 383 | intergenic (+29/+165) | purD/sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): new base (103/276): ref base (2/2): total (105/278) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.03e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.06e-01 | ||||||||||
Only 100 of 441 total aligned reads displayed.
ATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAAC.GGG.GGCGCTG..CCCCC.CTC.CTG..CTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTT > NC_014034/2566458‑2566649
|
gATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGCCATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.ATC.TTggcct < 1:8291003/101‑5 (MQ=255)
gtGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTggcctt < 2:388138/100‑6 (MQ=38)
tGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTggccttc < 1:3148110/101‑7 (MQ=38)
gTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTggccttcgg < 1:5618894/101‑9 (MQ=38)
cGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGTCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGcc > 1:3686276/1‑101 (MQ=37)
cGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGcc < 1:6654910/101‑1 (MQ=37)
cGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGcc > 1:3595548/1‑101 (MQ=37)
gATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGGGCGG..CCCCC.CTC.TTGGCCTTCGGccc > 1:2942549/1‑100 (MQ=37)
gATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCa < 2:8917344/101‑1 (MQ=37)
gATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCa < 2:7814776/101‑1 (MQ=37)
tCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCAcc < 1:193020/101‑1 (MQ=37)
tCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCAcc < 2:7001388/101‑1 (MQ=37)
cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCAcccccc > 2:5871235/1‑101 (MQ=25)
tGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCg < 1:6541963/101‑1 (MQ=25)
tGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCCCTGAGACG.AAACGGGG.GGCGCTGCCCCCCC.CTT.CGG..CTTCCGGCAAATCAccccccc > 1:4358873/1‑100 (MQ=255)
gCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCCATTCCCCCCCCcgg > 2:1389845/1‑101 (MQ=25)
gCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCggg < 1:4101714/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGGGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCCGCCACTTCACCCCCCcggcg > 2:6115917/1‑99 (MQ=21)
cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGata < 2:2617998/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCCATTCACCCCCCGGGatat > 1:525409/1‑101 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGatat < 2:2566587/101‑1 (MQ=25)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATAttt < 1:6705999/101‑1 (MQ=21)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATAttt < 2:848735/101‑1 (MQ=21)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATAttt < 1:1822618/101‑1 (MQ=21)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATAttt < 2:2389610/101‑1 (MQ=21)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTc < 1:7868198/101‑1 (MQ=21)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTc < 1:5487580/101‑1 (MQ=21)
ggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAAG.GGG.GGGGCTG..CCCCC.CCC.CTGGCCTTCGGCCCACTCACCCCCCGGGCTATTTCg > 1:4732184/1‑101 (MQ=255)
gTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCgg < 2:3133003/101‑1 (MQ=21)
ttCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCggg < 2:3590254/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGc < 1:5785720/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGc < 2:3456355/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGc < 1:6882056/101‑1 (MQ=21)
cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CCC.TTGGCCCTCGGCCCACTCACCCCCCCGGAGATTTCGGGCa > 1:7063049/1‑101 (MQ=21)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGGTAATTCGGGCCAg > 2:4575522/1‑101 (MQ=21)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAg < 1:3981766/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGAt < 1:4597723/101‑1 (MQ=21)
gccgcTCCAGCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATa < 1:1676109/101‑1 (MQ=18)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATa < 2:714543/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATa < 2:4008271/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATa < 2:1018975/101‑1 (MQ=21)
ccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATaa < 2:3706003/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATaaa < 1:2321962/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATaaa < 2:6339159/101‑1 (MQ=21)
gcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGGTAaag > 1:1039313/1‑101 (MQ=21)
gcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaag < 1:869769/101‑1 (MQ=21)
cgACATCGGCTGGCGCGCGCTCTGAGACG.AACC.GGGTGGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaaga < 1:8155435/101‑1 (MQ=21)
cgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaaga > 1:1213652/1‑101 (MQ=21)
aCATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaagaag < 1:7448058/101‑1 (MQ=21)
cATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAgg < 2:6521144/101‑1 (MQ=21)
tCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTc < 2:1474153/101‑1 (MQ=21)
tCGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTc < 2:6955122/101‑1 (MQ=21)
cGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCt > 1:2417895/1‑101 (MQ=21)
cGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCt < 1:2142862/101‑1 (MQ=21)
cGGCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCt > 1:5101828/1‑101 (MQ=21)
ggCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 1:8889796/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 2:5216077/101‑1 (MQ=21)
gCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCCCCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCttt < 1:1994603/101‑1 (MQ=21)
gCTGGCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCttt < 2:2225602/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACG.GAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCcttt < 1:7201113/101‑1 (MQ=18)
ggCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTcc < 1:2649652/101‑1 (MQ=21)
ggCGCGCGCTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTcc > 2:3295937/1‑101 (MQ=21)
gcgcgcTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 1:4913876/101‑1 (MQ=21)
cgcgcTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 2:9046709/101‑1 (MQ=21)
cgcgcTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 2:7303657/101‑1 (MQ=21)
cgcgcTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 2:2198703/101‑1 (MQ=21)
gcgcTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCa < 2:8246253/101‑1 (MQ=21)
cgcTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt < 2:1856942/101‑1 (MQ=21)
cgcTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt < 1:9139606/101‑1 (MQ=21)
gcTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc > 1:6396003/1‑101 (MQ=21)
gcTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 1:8201249/101‑1 (MQ=21)
gcTCTGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 2:4961700/101‑1 (MQ=21)
ctctGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCt > 1:531514/1‑101 (MQ=21)
ctctGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCACCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCt < 1:9034448/101‑1 (MQ=21)
tctGAGACG.AACCGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt < 2:2925057/101‑1 (MQ=21)
tctGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt > 1:2786357/1‑101 (MQ=21)
tctGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt < 2:5538083/101‑1 (MQ=21)
tctGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt < 2:8056132/101‑1 (MQ=21)
ctGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg < 2:3944920/101‑1 (MQ=21)
ctGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg > 2:7561907/1‑101 (MQ=21)
tGAGACG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGc < 2:4347223/101‑1 (MQ=21)
gaCG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCTCCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCg < 2:1758981/101‑1 (MQ=21)
gaCG.AAACGGGG.GGCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCg > 2:7884299/1‑101 (MQ=21)
gcaggg.ggCGCTG...CCCC.CTC.TTGGCCTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggg > 2:3238347/4‑101 (MQ=0)
cgggg.ggCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc > 1:7314422/3‑101 (MQ=25)
caggg.ggCGCTG...CCCC.CTC.TTGGCCTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggg > 2:2476428/3‑101 (MQ=0)
gggg.ggCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTTGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTCCCCGAAATATcc > 1:6293486/2‑101 (MQ=21)
gggg.ggCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc > 2:2802692/2‑101 (MQ=25)
gggg.ggCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc > 2:5567924/2‑101 (MQ=25)
aggg.ggCGCTG..CCCCCTCTT.GGC..CTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg > 2:2060547/2‑101 (MQ=0)
aggg.ggCGCTG...CCCC.CTC.TTGGCCTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg > 1:8508213/2‑101 (MQ=0)
ggg.ggCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATccc < 1:6099455/101‑1 (MQ=25)
gg.ggCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCg > 2:465830/1‑101 (MQ=25)
g.ggCGCTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCgg > 1:327226/1‑101 (MQ=25)
ggCGCTG..CCCCCTCTT.GGC..CTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggagc < 2:7410274/101‑5 (MQ=2)
ctcTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCggggg < 2:6644552/99‑1 (MQ=37)
cgcTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCggggg > 1:7655364/1‑101 (MQ=37)
cTG..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAg < 1:1389877/101‑1 (MQ=37)
tG..CCCCC.CTCTCGGC.CTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGc < 2:870211/101‑1 (MQ=37)
g..CCCCC.CTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGcc > 1:8062860/1‑101 (MQ=37)
|
ATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAAC.GGG.GGCGCTG..CCCCC.CTC.CTG..CTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTT > NC_014034/2566458‑2566649
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|