| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,590,199 | +C | 100% | intergenic (‑98/‑158) | glnE ← / → RCAP_rcc02415 | glutamate‑ammonia‑ligase adenylyltransferase/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,590,199 | 1 | .→C | 100.0% | 42.8 | 208 | intergenic (‑98/‑158) | glnE/RCAP_rcc02415 | glutamate‑ammonia‑ligase adenylyltransferase/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (187/5): ref base (0/16): total (187/21) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.27e-20 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.96e-01 | ||||||||||
Only 100 of 280 total aligned reads displayed.
CATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CG.CCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTGACCCG > NC_014034/2590099‑2590294
|
cATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.g.cg > 2:671400/1‑101 (MQ=255)
cATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.g.cg > 2:3347350/1‑101 (MQ=255)
aTGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.g.cg.c > 2:1729160/1‑101 (MQ=255)
gggCCCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CG.cc < 2:5616193/100‑1 (MQ=255)
ggCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CG.ccc < 1:3138742/101‑1 (MQ=255)
gcgcCAGCCTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CG.ccc.c < 2:3569481/101‑1 (MQ=255)
cgcCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CG.ccc.cc > 1:6266505/1‑101 (MQ=255)
gcCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CG.ccc.ccc > 1:3336921/1‑100 (MQ=255)
ccaagccTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CG.ccc.ccc < 1:1198182/95‑2 (MQ=255)
cAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CG.ccc.cccgc > 2:6830138/1‑98 (MQ=255)
cTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCA..GGGGGGTGGGGGGGGC.A.G.CGCCCC.CC..G..CCggg > 2:1122323/1‑101 (MQ=38)
tAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.G.G.GGCCCC.CC..G..CCgggg > 2:3887293/1‑100 (MQ=38)
tAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGt > 2:8486488/1‑101 (MQ=255)
tAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGt > 2:7566196/1‑101 (MQ=255)
aGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTc > 2:6426764/1‑101 (MQ=255)
gcAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCgg > 2:4902762/1‑101 (MQ=255)
cAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGgc > 2:8347909/1‑101 (MQ=255)
cAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGgc > 2:5445080/1‑101 (MQ=255)
cAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CG.CCCGCC..G..CCGGGTCGCCTCGgc > 2:5844013/1‑101 (MQ=255)
aaGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCGTCGgcg > 2:4008841/1‑101 (MQ=255)
aGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGgcgc > 1:6596420/1‑101 (MQ=255)
aGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGgcgc > 1:1139485/1‑101 (MQ=255)
gCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGgcttg > 1:2292980/1‑98 (MQ=255)
cGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGcc > 2:1407603/1‑101 (MQ=255)
cGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGcc > 1:727394/1‑101 (MQ=255)
gggTCAAGGCGCACAAATGCCCCGCCCCGGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGAGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCg > 1:6520340/1‑101 (MQ=38)
gagTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGGCGCCTCGGCGCAAGCCg > 2:5045244/3‑101 (MQ=255)
ggTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGa > 1:7494311/1‑101 (MQ=255)
gTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAg > 1:5033124/1‑101 (MQ=255)
gTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAg > 1:1676723/1‑101 (MQ=255)
tCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAgg > 2:4554022/1‑101 (MQ=255)
tCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAgg > 1:5978192/1‑101 (MQ=255)
tCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAgg > 2:4337441/1‑101 (MQ=255)
aaGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAgcga > 2:8045881/1‑98 (MQ=255)
aaGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCg > 2:4612483/1‑101 (MQ=255)
aaGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATACC..GGGGGGTGCGGGGGGA.A.G.CGCCCC.CC..G..CCGGGGAGCCTCGGCGCAAACGGAggga > 2:4240888/1‑99 (MQ=255)
ggCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGaa > 2:1941703/1‑101 (MQ=255)
gccgaaacccccccccccTGTCCGTCTGGGCGCGAATCCCGG..GGGGGGGGGGGGGGGC.G.GCCC.CCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAt < 2:2632656/92‑1 (MQ=12)
gcAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctc > 1:445744/1‑101 (MQ=255)
caagccccccgccctTGT.CCTCTGGGCGCAAATCCCCG..GGGGGGGGGGGGGGGC.G.GCCC.CCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctct < 2:2160030/95‑1 (MQ=16)
cAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctct > 2:6320970/1‑101 (MQ=255)
aaaTGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctctc > 2:296735/1‑101 (MQ=255)
aaaTGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctctc > 2:1614950/1‑101 (MQ=255)
aaTGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTcc > 1:6844545/1‑101 (MQ=255)
ccccccccccccTGT.CCCTTGGGGGCGAA.ATCCCGGGGGGGGGGGGGGGGGC.C.GCCC.CCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTcc < 2:4665892/98‑1 (MQ=9)
atccccccccccTGT.CTTTGTGGCGCGAAGCCCGG..GGGGGGTGCGGGGGGC.G.GCCC.CCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTccc < 1:5682817/98‑1 (MQ=16)
aTGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTccc > 1:8042635/1‑101 (MQ=255)
aTGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTccc > 1:6703641/1‑101 (MQ=255)
gccccgccccTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCg > 1:9163846/1‑101 (MQ=255)
ccgccccTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGAcc > 1:1329273/1‑101 (MQ=255)
gccccTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGAcccc > 1:5336377/1‑101 (MQ=255)
cccTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCtt > 1:4781477/1‑101 (MQ=255)
cccTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCtt > 2:5877105/1‑101 (MQ=255)
cgtttcctCTGGGCGCAAATCCCCG..GGGGGGGGGGGGGGGC.A.GCCC.CCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTg < 2:7191260/94‑1 (MQ=21)
tGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcg > 2:5155344/1‑101 (MQ=255)
tgcctgctcggCGCGAATCCCGG..GGGGGGGGGGGGGGGCGC.C.CC.CCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcg < 2:568904/92‑1 (MQ=16)
gT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcgg > 2:2717364/1‑101 (MQ=255)
gT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcgg > 1:2113359/1‑101 (MQ=255)
t.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGCAATCTCTCCCCCAACCCTTgcgtc > 2:7339581/1‑99 (MQ=25)
cttttgggCGCAAATCCCCG..GGGGGGGGGGGGGGGC.A.GCCC.CCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcggcg < 2:6629659/95‑1 (MQ=21)
aTCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGgcgc > 2:7126104/1‑101 (MQ=255)
cTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCaa > 2:8722580/1‑101 (MQ=255)
ttGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAAt > 2:9104203/1‑101 (MQ=255)
ttGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAAt > 1:404151/1‑101 (MQ=255)
tGGCGCGAATCTCCG..GGGGGGGGGGGGGGCC.G.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATg < 2:8310110/101‑1 (MQ=25)
gggggatggtCCG..GGGGGGGGGCGGGGGC.A.C.CC.CCC.CC..GGCCCGGGTCGCCACGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGt < 1:5793140/92‑1 (MQ=19)
gcgAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTaaa > 1:3370824/1‑101 (MQ=255)
gcaatgcccc..GGGGGGGGGGGGGGGC.C.C.CC.CCC.CCCGG..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTaaa < 1:8474097/94‑1 (MQ=25)
gAATATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTaaaaa > 1:1874012/1‑101 (MQ=255)
gaaccccc..GGGGGGGGGGGGGGGCGAGG.CC.CCC.CG..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTaaaaa < 1:7566520/96‑1 (MQ=25)
aaTATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAAt > 2:7797166/1‑101 (MQ=255)
aaTATCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAAt > 1:9187493/1‑101 (MQ=255)
atatCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATc > 1:3664511/1‑101 (MQ=255)
tatCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCt > 1:696435/1‑101 (MQ=255)
atCCC..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCtt > 1:4501996/1‑101 (MQ=255)
ccc..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCGCGACCCCTTGCGGCGCAATGTAAAAATCTTTc > 1:4669667/1‑101 (MQ=255)
ccc..GGGGGGTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTc > 2:8123320/1‑101 (MQ=255)
acccgggggggGGGGGGGGGC.G.C.CCCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCtt < 2:3696979/96‑1 (MQ=25)
cgggggggggGGGGGGGCGC.C.C.CC.CCC.CC..C..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTc < 2:5992951/97‑1 (MQ=37)
cgcgggggggGGCGGGGGGC.C.GCCC.CCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCttt < 2:2863103/97‑1 (MQ=37)
ggggggggGGGGGGGGCC.C.C.CC.CCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcac < 1:3855317/99‑1 (MQ=37)
ggggggTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcaca > 2:448082/1‑101 (MQ=255)
ggggggGGGGGGGGGC.G.GCCC.CCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcaca < 2:7397945/101‑1 (MQ=37)
ggggggGGGGGGGGCC.C.G.CCCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcaca < 2:4072036/101‑1 (MQ=37)
ggggggGGGGGGGGCC.C.G.CCCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcaca < 1:4821421/101‑1 (MQ=37)
gggggTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACAt > 1:8362537/1‑101 (MQ=255)
ggggTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATc > 2:7005898/1‑101 (MQ=255)
ggggTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATc > 2:1563711/1‑101 (MQ=255)
ggTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATccc > 2:329892/1‑101 (MQ=255)
gTGCGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCATTGTAAAAATCTTTCACATcccc > 2:3813538/1‑101 (MQ=255)
gggggggC.G.G.CCCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCctct < 1:4378896/100‑1 (MQ=38)
cGGGGGGC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAACGTAAAAATCTTTCACATCCCctct > 2:9000831/1‑101 (MQ=255)
ggggggC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCtt > 2:7716798/1‑101 (MQ=255)
ggggggC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCtt > 1:2585211/1‑101 (MQ=255)
gggggC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTg > 2:6523669/1‑101 (MQ=255)
ggggC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTga > 1:9068031/1‑101 (MQ=255)
gggC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTgac > 1:5486638/1‑101 (MQ=255)
ggC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTgacc > 2:2457419/1‑101 (MQ=255)
ggC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTgacc > 1:1984571/1‑101 (MQ=255)
gC.A.G.CGCCCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTgaccc > 1:3530437/1‑101 (MQ=255)
|
CATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGC.A.G.CG.CCC.CC..G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTGACCCG > NC_014034/2590099‑2590294
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|