| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,995,643 | +C | 2.3% | intergenic (+183/+37) | RCAP_rcc02802 → / ← RCAP_rcc02803 | membrane dipeptidase/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,995,643 | 1 | .→C | 2.3% | 2.0 ‑0.6 ‑0.3 | 128 | intergenic (+183/+37) | RCAP_rcc02802/RCAP_rcc02803 | membrane dipeptidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (3/0): ref base (79/46): total (82/46) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.52e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.16e-01 | ||||||||||
Only 100 of 140 total aligned reads displayed.
GGAAAACCCCTTCGGTTGCCGCCCCGCAACCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAGGC.GGGCCGAAAGC > NC_014034/2995543‑2995742
|
ggcaaaCCCCTTCGGTTGCCGCCCCGCAACCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCcg < 2:9099029/98‑1 (MQ=255)
aaCCCCTTCGGTTGCCGCCCCGCAACCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.Cggg > 1:4608168/1‑101 (MQ=255)
ccccTACGGTTGCCGCCCCGCAACCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGAGGAG.GCCCCcggcgggc > 2:4524832/1‑95 (MQ=25)
ccTTCGGCGGCCCCCCCCAACCCCGTGGGCGGCCCGGCGCCCTG.TTTTTCCTTGGCAAAA.GCCG.CGGGGGGGTGGGGGGGGGGGAG.CCCCCCG.CGGGTCGc < 2:7099259/101‑1 (MQ=9)
ttCGGTTCCGGCCCCCCACCCCGGCGGCGGCCCGGCGCCGTG.CTTTTCCTTGGCAAAA.TGGG.CCGGGGGGTGGGGGGGGCGGGG.CCCCCCG.CGGGTCGccc < 2:7185409/101‑1 (MQ=17)
tggggTTCCCGCCCCGCACGCCGGCGGGGGCCCGGCGCCCTG.CTTTTCCTGGGCAAAA.TGCG.CGGGGGGGGGCGGGGGGCGGAG.CCCCCCG.CGGGTCGccc < 2:4773511/98‑1 (MQ=17)
cGGTTGCCGCCCCGCAGCCCGTCGGCGGCCCAGCGCCTTG.CTTTTCCTGGGCAAAA.TACG.CGGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCg < 2:5513393/101‑1 (MQ=21)
cGGTTGCCGCCCCGCACCCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CGGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCg < 2:8844861/101‑1 (MQ=255)
cGGTTGCCGCCCCGCAACCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCg > 2:5512268/1‑101 (MQ=255)
gTTGCCGCCCCGCAACCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGGCGCCCCGGc > 1:6954977/1‑101 (MQ=255)
tGCCGCCCCGCAACCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCtt > 2:4509439/1‑101 (MQ=255)
tGCCGCCCCGCAACCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCtt < 2:4845666/101‑1 (MQ=255)
ggcccccCCGCAGCCCGCCGGCGGCCCGGCGCCTTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGGGGGGGGCGGGG.CCCCCCG.CGGGTCGCCCCGGCtt < 2:4128514/100‑1 (MQ=18)
cgccCCGCAACCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..Gcc > 2:4038044/1‑101 (MQ=255)
gccCCGCAACCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCNNNN.NCCCCCG.CGGGTCGCCCCGGCTT..GCCg > 1:5500534/1‑101 (MQ=255)
cGCACCCGGTGGGCGCCCCAGCGCCCTG.CTTTTCCTTGCCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGc < 2:8579474/101‑1 (MQ=18)
aaCCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCgga > 2:8465992/1‑99 (MQ=255)
aaCCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGaa > 2:3154709/1‑101 (MQ=255)
cccGGCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TCCG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAAt < 2:528119/101‑1 (MQ=255)
cGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GTCGGGGCGAAATcc > 2:9056519/1‑101 (MQ=255)
ccggcggCCCAGCGCCCTG.CTTTCCCTTGGCAAAA.TCCG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATcccc < 2:5288182/100‑1 (MQ=255)
ggcggcCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATcccccc > 2:19362/1‑100 (MQ=255)
gcggcCC.GCCCCCTGTCTTTCCTTTGGCAAAA.CACG.CGGGGGGGGGGGGGGGGGGGAC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGc < 1:3671193/101‑1 (MQ=16)
cggcCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGcc > 1:4599637/1‑100 (MQ=255)
ggcCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTc > 1:4756022/1‑101 (MQ=255)
ggcCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGGCGCCCCGGCTT..GCCGGGGCGGAATcccccccgc > 2:2958105/1‑97 (MQ=255)
gcccgggccccTG.CTTTCCCTGGCCAAAA.TCCG.CGGGGGGGTGGGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCa < 2:456443/93‑1 (MQ=18)
gcCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CGGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCa < 2:8482163/101‑1 (MQ=255)
gcCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATccccccccca > 2:8064780/1‑96 (MQ=255)
cccAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAg > 2:5997557/1‑101 (MQ=255)
cAGCGCCTTC.TTTTTCCTGGGGAAAA.TGCG.CGGGGGGGTGGGGGGGGGGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTc < 2:6714251/101‑1 (MQ=21)
gcgcCCTG.CTTTTCCTGGGAAAAA.TGCG.CGGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTccc < 1:7310605/101‑1 (MQ=21)
gcccccTG.CTTTTCCTTGGCAAAA.TGCG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTccc < 2:5217978/98‑1 (MQ=255)
cgcCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCa > 2:8575904/1‑101 (MQ=255)
ccccccggttttCCCTGGCAAAAGTCCG.CGGGGGGGTGCGGGGGGCGGAC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTccc < 2:6041138/93‑1 (MQ=21)
ccccgtttttgCCTTGGGAAAA.TGCG.GCGGGGGGGGGGGGGGGGGGGGCCCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCa < 1:55343/94‑1 (MQ=21)
g.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGGAATCCCCCGCTCAGGCCCAGAGACt > 1:8716136/1‑101 (MQ=255)
gtttttCCTTGGAAAAA.TACGCCCGGGGGGTGCGGGGGGCGGAG.CCCCCCGCCGGGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCC.CTCAGCccttcat > 1:8974751/3‑96 (MQ=0)
tttttCCTTGGAAAAA.TACGCCCGGGGGGTGCGGGGGGCGGAG.CCCCCCGCCGGGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCC.CTCAGCccttcatc > 2:6228997/2‑95 (MQ=0)
ttCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCCGAGACTTTCg > 1:6937839/1‑101 (MQ=255)
ttCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCCGAGACTTTCg > 2:5274606/1‑101 (MQ=255)
tCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGa > 1:4744734/1‑101 (MQ=255)
tCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGa > 1:1667698/1‑101 (MQ=255)
tCCTTGGAAAAA.TACGCCCGGGGGGTGCGGGGGGCGGAG.CCCCCCGCCGGGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCC.CTCAGCccttcatcttga > 2:8040310/1‑91 (MQ=0)
cctggacAAAA.TCGG.CCGGGGGGGGGGGGGGGCGGAC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGAc < 2:2078307/95‑1 (MQ=37)
tgggCAAAA.TGCG.GGGGGGGGTGGGGGGGGGGGAC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCt < 1:5089857/99‑1 (MQ=37)
tGGAAAAA.TACG.CGGGGGGGTGGGGGGGGCGGAC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTc < 2:3462261/101‑1 (MQ=37)
gggCAAAA.TACG.CGGGGGGGTGGGGGGGGCGGAC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTc < 1:1317648/100‑1 (MQ=255)
gaaaaa.TACG.CGGGGGGGGGCGGGGGGGGGAC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGa < 1:8664121/99‑1 (MQ=37)
gCAAAG.TCCG.CGGGGGGGGGGGGGGGGCGCAC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGa < 2:5171205/101‑1 (MQ=37)
gCAAAA.TCGG.CGGGGGGGTGCGGGGGGCGGAC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGa < 1:1031928/101‑1 (MQ=37)
gCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCgc > 1:465206/1‑100 (MQ=255)
aa.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCg > 2:6966985/1‑101 (MQ=255)
a.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCgg > 2:7942909/1‑101 (MQ=255)
a.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCgg > 1:4031325/1‑101 (MQ=255)
a.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CCGGTCGCCCCGGCTT..GCCCGGGCGAAATCCCCCGCTCAGGCCCAGAGACCTTCGACCTCGAACCgg > 2:1091095/1‑101 (MQ=25)
tACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCggg > 2:7062355/1‑101 (MQ=255)
cG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTc > 2:3778539/1‑101 (MQ=255)
ggggggggggGGGGGGGGCCGCCC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTc < 1:5512475/97‑1 (MQ=37)
g.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCa > 1:4474904/1‑101 (MQ=255)
ggggggggGGGGGGGGGGGGCC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAg < 1:188995/99‑1 (MQ=38)
ccGGGGGGTGCGGGGGGCGGAC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAg < 2:1364632/101‑1 (MQ=255)
ggggggTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGAc > 2:8212018/1‑101 (MQ=255)
ggggggTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGAc > 1:7445561/1‑101 (MQ=255)
gggggTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGAcg > 1:2664298/1‑101 (MQ=255)
gggggTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGAcg > 2:2408558/1‑101 (MQ=255)
gggggTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGGCAGAcg > 1:3056469/1‑101 (MQ=255)
gTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCGCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGa > 1:5134435/1‑101 (MQ=255)
gTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGa > 2:7669982/1‑101 (MQ=255)
gTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGa > 2:664215/1‑101 (MQ=255)
gTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGa > 2:5365437/1‑101 (MQ=255)
gTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGACGGAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGCCAGAcccgaa > 1:4995569/1‑99 (MQ=38)
gTGCGGGGGGCGGAC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGa < 2:7472024/101‑1 (MQ=255)
gCGGGGGGCGGAG.CCCCCCG.CGGGTCGCACCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCGGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATg > 1:6507044/1‑101 (MQ=255)
cGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATgc > 2:1054255/1‑101 (MQ=255)
cGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATgc > 2:7683155/1‑101 (MQ=255)
cGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCGT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATgc > 1:6458595/1‑101 (MQ=255)
ggggggCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGCCGCGGATgcg > 2:756432/1‑101 (MQ=255)
ggggggCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATgcg > 2:2359170/1‑101 (MQ=255)
ggggggCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGGCAGACGCGGATgcg > 2:1420022/1‑101 (MQ=255)
gggggCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTNGACCTCGAACCGGGTCAGCCGCGGATgcgc > 1:3892414/1‑101 (MQ=255)
gggggCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATgcgc > 1:6597337/1‑101 (MQ=255)
gggggCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATgcgc > 1:2380964/1‑101 (MQ=255)
tcttccgatccccccG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCa < 2:2403388/92‑1 (MQ=255)
gggCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGGCAGACGCGGATGCGCAg > 1:6403610/1‑101 (MQ=255)
ggCGGGC.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAgg < 2:1018339/101‑1 (MQ=255)
ggCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAgg > 1:5465782/1‑101 (MQ=255)
cGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGGAGGC.g > 1:362280/1‑101 (MQ=255)
ggAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAGGcag > 2:8822736/1‑99 (MQ=255)
ggAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAGGC.gg > 1:5485841/1‑101 (MQ=255)
ggAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAGGC.gg > 1:3014069/1‑101 (MQ=255)
ggccccccccG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAGGC.gg < 1:8948893/97‑1 (MQ=255)
gAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAGGC.ggg > 2:6995692/1‑101 (MQ=255)
aG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAGGC.GGGc > 1:7776797/1‑101 (MQ=255)
g.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAGGC.GGGcc < 1:5990938/101‑1 (MQ=255)
ccccccG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAGGC.GGGCCg < 1:2510769/101‑1 (MQ=255)
cccG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAGGC.GGGCCGaaa > 2:3545914/1‑101 (MQ=255)
cccG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAGGC.GGGCCGaaa < 1:1507439/101‑1 (MQ=255)
ccG.CGGGTCGCCCCGCCTT..GCCGGGGGGAAATCCCCCGCCAAGTCCCCGAGACTTTCG.CCTCCAAACCGGGCAAACCGGGAATCGCAGGCGGGGCCGaagc > 2:8747032/1‑99 (MQ=255)
cg.cgGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAGGC.GGGCCGAAAGc > 1:7399236/1‑101 (MQ=255)
|
GGAAAACCCCTTCGGTTGCCGCCCCGCAACCCGTCGGCGGCCCAGCGCCCTG.CTTTTCCTTGGCAAAA.TACG.CCGGGGGGTGCGGGGGGCGGAG.CCCCCCG.CGGGTCGCCCCGGCTT..GCCGGGGCGAAATCCCCCGCTCAGTCCCAGAGACTTTCGACCTCGAACCGGGTCAGACGCGGATGCGCAGGC.GGGCCGAAAGC > NC_014034/2995543‑2995742
Base quality scores:
ATCG
< 3 ≤
ATCG
< 12 ≤
ATCG
< 20 ≤
ATCG
< 31 ≤
ATCG
< 39 ≤
ATCG
|